prot_Ecto-sp13_S_contig87765.20247.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig87765.20247.1
Unique Nameprot_Ecto-sp13_S_contig87765.20247.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length186
Homology
BLAST of mRNA_Ecto-sp13_S_contig87765.20247.1 vs. uniprot
Match: D8LJA4_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJA4_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 8.040e-72
Identity = 136/186 (73.12%), Postives = 140/186 (75.27%), Query Frame = 0
Query:    1 MNVAHEDLDFYNPEEKRTRKAAGTTPEERSSFAVNLLGCHPPPSCAAAVAVDTIPRPNDKKSRGSSXXXXXXXXXXXXXXXXXXXXXXXXEAGDGGCDGNKAEGSGCSLVDTFREKHPKATGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDGVHDAFVLDMDTVGVSDHCPVGLVLQLGDHY 186
            MNVAHED+DFYNPE+KRTRKAAGTTPEERSSFAVNLLGCHP                         XXXXXXXXXXXXXX                   NKAEGSGCSLVDTFREKHPK TGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDGVHDAFVLD DTVGVSDHCPVG+VL+LGDHY
Sbjct:  311 MNVAHEDVDFYNPEQKRTRKAAGTTPEERSSFAVNLLGCHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------NKAEGSGCSLVDTFREKHPKVTGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDGVHDAFVLDRDTVGVSDHCPVGVVLRLGDHY 477          
BLAST of mRNA_Ecto-sp13_S_contig87765.20247.1 vs. uniprot
Match: A0A7S4D5F5_HETAK (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5F5_HETAK)

HSP 1 Score: 90.5 bits (223), Expect = 1.150e-19
Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 0
Query:  109 LVDTFREKHPKATGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDGVHDAFVLDMDTVGVSDHCPVGLVLQ 181
             +DTFR KHP+A+G +SYWS RARNRP NRG+R+DY L S+ L   + + DAF+L  +T G +DHCPV LVL+
Sbjct:   87 FIDTFRWKHPEASGAYSYWSQRARNRPYNRGLRIDYALVSQRLE--NRIIDAFILHEETEGRNDHCPVALVLK 157          
BLAST of mRNA_Ecto-sp13_S_contig87765.20247.1 vs. uniprot
Match: A0A7S0DQ90_9EUKA (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DQ90_9EUKA)

HSP 1 Score: 92.8 bits (229), Expect = 8.510e-19
Identity = 50/91 (54.95%), Postives = 59/91 (64.84%), Query Frame = 0
Query:  107 CSLVDTFREKHPKATGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGG----------DG-------VHDAFVLDMDTVGVSDHCPVGLVL 180
            C L+DTFR  HPKA GV+SYWS RARNR  NRG+RLDY + ++ LV G          DG       V D+FVLD  T+GVSDH PVGL+L
Sbjct:  334 CELIDTFRHLHPKAKGVYSYWSQRARNRDWNRGLRLDYFVVNKKLVEGTHDISVDNAADGSKSTKIRVVDSFVLDSSTLGVSDHAPVGLLL 424          
BLAST of mRNA_Ecto-sp13_S_contig87765.20247.1 vs. uniprot
Match: A0A7R9Y652_MICPS (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y652_MICPS)

HSP 1 Score: 88.2 bits (217), Expect = 4.960e-18
Identity = 45/80 (56.25%), Postives = 53/80 (66.25%), Query Frame = 0
Query:  109 LVDTFREKHPKATGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDG------VHDAFVLDMDTVGVSDHCPVGLVLQL 182
            + DTFR  HP ATG F+YWS R  NRPVNRG+RLDY +AS  ++ G        V D FVLD  TVGVSDH PVG+ L +
Sbjct:  164 MSDTFRHFHPDATGWFTYWSQRVGNRPVNRGLRLDYFVASNDILSGGSRCDVAEVVDGFVLDAITVGVSDHAPVGVTLAV 243          
BLAST of mRNA_Ecto-sp13_S_contig87765.20247.1 vs. uniprot
Match: W7TRL7_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRL7_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.310e-16
Identity = 49/93 (52.69%), Postives = 64/93 (68.82%), Query Frame = 0
Query:   99 GNKAEGSGCSLVDTFREKHPKATGVFSYWSVRARNRPVNRGMRLDYCLASRGLV-GGD---GVH---DAFVLDMDTV--GVSDHCPVGLVLQL 182
            G   EG+G  +VD+FR  HP  TG +SYWS+RA NRP NRGMRLDY LAS+ ++ GGD   GV    D+F+LD D     +SDH PVG++L++
Sbjct:  475 GRLLEGAG--MVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV 565          
BLAST of mRNA_Ecto-sp13_S_contig87765.20247.1 vs. uniprot
Match: A0A7J6P2G4_PEROL (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6P2G4_PEROL)

HSP 1 Score: 84.3 bits (207), Expect = 9.090e-16
Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 0
Query:  109 LVDTFREKHPKATGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDGVHDAFVLDMDTVGVSDHCPVGLVLQ 181
             +DTF   HP+ATG FSYWSVRARN+P NRG+RLDY +A+ G    D + DAF+L+ D     DHCPVG+  +
Sbjct:  356 FIDTFANMHPEATGCFSYWSVRARNKPKNRGLRLDYVMAAPGFP-TDRIKDAFILE-DFAPHGDHCPVGVTFK 426          
BLAST of mRNA_Ecto-sp13_S_contig87765.20247.1 vs. uniprot
Match: A0A7S3W719_EMIHU (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W719_EMIHU)

HSP 1 Score: 80.5 bits (197), Expect = 1.480e-15
Identity = 60/185 (32.43%), Postives = 76/185 (41.08%), Query Frame = 0
Query:    1 MNVAHEDLDFYNPEEKRTRKAAGTTPEERSSFAVNLLGCHPPPSCAAAVAVDTIPRPNDKKSRGSSXXXXXXXXXXXXXXXXXXXXXXXXEAGDGGCDGNKAEGSGCSLVDTFREKHPKATGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDGVHDAFVLD---MDTVGVSDHCPVGLVLQL 182
            MNVAHED+DF+NP E+RT   AGTTPEER+S    L     PP                                                                 + D FR+ H +A G ++YWS RAR RP NRG+R+DY L +       GV  A V+D   +  +  SDHCP+ L L L
Sbjct:   76 MNVAHEDVDFHNPAERRTLTQAGTTPEERASLRCFLA----PP---------------------------------------------------------------LGMRDAFRQVHGRAAGQYTYWSQRARARPANRGLRIDYFLLA------SGVPPAAVVDVQHLQEMHGSDHCPILLELDL 187          
BLAST of mRNA_Ecto-sp13_S_contig87765.20247.1 vs. uniprot
Match: C5KUG1_PERM5 (Ap endonuclease, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KUG1_PERM5)

HSP 1 Score: 77.0 bits (188), Expect = 3.750e-15
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 0
Query:  109 LVDTFREKHPKATGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDGVHDAFVLDMDTVGVSDHCPVGLVLQ 181
              DTF   HP ATG FSYWSVRAR++P NRG+RLDY +++ G    D + DAF+L+ D     +HCPVG+  +
Sbjct:   25 FTDTFAHMHPHATGCFSYWSVRARDKPRNRGLRLDYVISAPGFP-IDRIEDAFILE-DFAPHGNHCPVGVTFE 95          
BLAST of mRNA_Ecto-sp13_S_contig87765.20247.1 vs. uniprot
Match: A0A7S3PFH3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PFH3_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 5.620e-15
Identity = 44/88 (50.00%), Postives = 54/88 (61.36%), Query Frame = 0
Query:  109 LVDTFREKHPKATGVFSYWSVRARNRPVNRGMRLDYCLASRGL-----VGGDG---------VHDAFVLD-MDTV-GVSDHCPVGLVL 180
             VDTFR  +P+A G F+YWS+RA NRP NRG+RLDYC+ASR L       GD          V D+F+LD +D     SDHCPVG  +
Sbjct:   40 FVDTFRFFNPEAQGCFTYWSMRANNRPANRGLRLDYCIASRNLCVDVDAYGDNKKKSKPGIYVGDSFILDDLDQFPSFSDHCPVGCTI 127          
BLAST of mRNA_Ecto-sp13_S_contig87765.20247.1 vs. uniprot
Match: C5KC98_PERM5 (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KC98_PERM5)

HSP 1 Score: 80.9 bits (198), Expect = 1.150e-14
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0
Query:  109 LVDTFREKHPKATGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDGVHDAFVLDMDTVGVSDHCPVGLVLQ 181
              DTF   HP+ATG FSYWSVRARN+P NRG+RLDY + + G    D + DAF+L+ D     DHCPVG+  +
Sbjct:  292 FTDTFVNMHPEATGCFSYWSVRARNKPKNRGLRLDYVITAPGFP-MDKIKDAFILE-DFAPHGDHCPVGITFR 362          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig87765.20247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJA4_ECTSI8.040e-7273.12DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A7S4D5F5_HETAK1.150e-1957.53DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A7S0DQ90_9EUKA8.510e-1954.95DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A7R9Y652_MICPS4.960e-1856.25DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
W7TRL7_9STRA3.310e-1652.69DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A7J6P2G4_PEROL9.090e-1654.79DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A7S3W719_EMIHU1.480e-1532.43DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
C5KUG1_PERM53.750e-1550.68Ap endonuclease, putative n=1 Tax=Perkinsus marinu... [more]
A0A7S3PFH3_9STRA5.620e-1550.00Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
C5KC98_PERM51.150e-1453.42DNA-(apurinic or apyrimidinic site) endonuclease n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004808AP endonuclease 1PANTHERPTHR22748AP ENDONUCLEASEcoord: 1..37
IPR004808AP endonuclease 1PANTHERPTHR22748AP ENDONUCLEASEcoord: 108..182
NoneNo IPR availablePANTHERPTHR22748:SF6DNA-(APURINIC OR APYRIMIDINIC SITE) LYASEcoord: 108..182
coord: 1..37
IPR020848AP endonuclease 1, conserved sitePROSITEPS00728AP_NUCLEASE_F1_3coord: 137..148
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig87765contigEcto-sp13_S_contig87765:9..566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig87765.20247.1mRNA_Ecto-sp13_S_contig87765.20247.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig87765 3..566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig87765.20247.1 ID=prot_Ecto-sp13_S_contig87765.20247.1|Name=mRNA_Ecto-sp13_S_contig87765.20247.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=186bp
MNVAHEDLDFYNPEEKRTRKAAGTTPEERSSFAVNLLGCHPPPSCAAAVA
VDTIPRPNDKKSRGSSSSPLPTSAADDSFRSSAASSGGGEEAGDGGCDGN
KAEGSGCSLVDTFREKHPKATGVFSYWSVRARNRPVNRGMRLDYCLASRG
LVGGDGVHDAFVLDMDTVGVSDHCPVGLVLQLGDHY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004808AP_endonuc_1
IPR020848AP_endonuclease_F1_CS
IPR036691Endo/exonu/phosph_ase_sf