prot_Ecto-sp13_S_contig12438.2023.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12438.2023.1
Unique Nameprot_Ecto-sp13_S_contig12438.2023.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length401
Homology
BLAST of mRNA_Ecto-sp13_S_contig12438.2023.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 9.480e-86
Identity = 175/454 (38.55%), Postives = 234/454 (51.54%), Query Frame = 0
Query:   16 DGNPVGRRGAGKVFGIDPKLARDWETQEGEL--VAFSKQSAGKQRSLHPGRESDTQKAEAAVEDEINTLRKNGAA-VTRDLVMAKLLAEMPTFAGGMPSADDPEKMEKFRRLYNAWYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKF-----------------------------------RSVLRKIFELLYNMDQTPIQADMRSETTVETTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSWWCDGTQSDDWVTQDFTRRPGS-SPRDRRPSVLVLDDFRCHREEKFQQKLASMAKTQVVMRGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRDNFG--RSGNVSAPSRGLVATWVKEVWAGISAQTILSYFKVCGLTLNLRGSEDH 401
            DG PVG  GA KV  +  K   +W   E +L     +     K + +H G +  T  AE      ++      A  +    VM KLL   P   GGMP+   PE+   F+  +N+WY RF KR+ FSI+R+TSVGQK P+G+EG AWA + K                                     SV  ++FE + NMDQ P+Q +M  ETT++ TGAK  RISTGG  EK R+T+VL V  DG+KV PRII++GTPF                           R   G+P  G+S GVQ+  W D  + + W++  +  RP + S   +RP +LVLDDF+CH +E F   L   A T V+   GGLTP+ QPLDR +NK+ KR  R KYT +        RSG +  P RG+V+TW KE W  I+ +T+ +  K+CGLTL L GSEDH
Sbjct:  113 DGQPVGNNGAAKVLQVPRKRIIEWLKPEAQLREKVSANPKLSKAKQVHSGGKVSTVDAEQPFPCGLHQRATQAAPRLGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDH 566          
BLAST of mRNA_Ecto-sp13_S_contig12438.2023.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 9.250e-84
Identity = 175/458 (38.21%), Postives = 234/458 (51.09%), Query Frame = 0
Query:   20 VGRRGAGKV-FGIDPKLARDWETQEGEL--VAFSKQSAGKQRSLHPGRESDTQKAEAAVEDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGMPSADDPEKMEKFRRLYNAWYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKFRSVLRK-----------------------------------IFELLYNMDQTPIQADMRSETTVETTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSWWCDGTQSDDWVTQDFTRRPGSSPRDR---------RPSVLVLDDFRCHREEKFQQKLASMAKTQVVMRGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRDNFG--RSGNVSAPSRGLVATWVKEVWAGISAQTILSYFKVCGLTLNLRGSEDH 401
            VG +G+  +   +  K   +W  QEG+L     +     K + +H G ++ T  AE A+ D IN  RK         VM KLL   P   GGMP+   PE+   F+  +N+WY RF KR+ FSI+R+ SVGQK P+G+EG AWA + K R  L K                                   +FE L NMDQTP+Q +M  ETT+E TG K  RISTGG+ EK R+T+VL V  DG+ V P II+KGTPF                           R   G+P  G+S GVQ+  W    + + W+   +   P +    R         RP +LVLDDF+CH++E F   L   A T V+   GGLTP+ QPLDR +NK+ KR  R KYT +        RSG +  P RG+V+TW KE W  ++++T+ + FK+CGLTL L GSEDH
Sbjct:   77 VGGKGSYPIRLQVPRKRIIEWLKQEGQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDH 533          
BLAST of mRNA_Ecto-sp13_S_contig12438.2023.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 5.630e-83
Identity = 183/480 (38.12%), Postives = 240/480 (50.00%), Query Frame = 0
Query:    3 KLEVLKYSRSKC-ADGNPVGRRGAGKVFGIDPKLARDWETQEGEL--VAFSKQSAGKQRSLHPGRESDTQKAEAAVEDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGMPSADDPEKMEKFRRLYNAWYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKFRSVLRK-----------------------------------IFELLYNMDQTPIQADMRSETTVETTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF--RTSFGYPPAGISLGVQKSW--------------------------------------WCDGTQSDDWVTQDFTRRPGS-SPRDRRPSVLVLDDFRCHREEKFQQKLASMAKTQVVMRGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRDNFG--RSGNVSAPSRGLVATWVKEVWAGISAQTILSYFKVCGLTLNLRGSEDH 401
            KL    Y+R  C  DG PVG  GA  V  +  K   +W  QE +L     +     K + +H G ++ T  AE A+ D +N  RK         VM KLL   P   GGM +   PE+   F+  +N+WY RF KR+ FSI+R+TSVGQK P+G+EG AWA + K R  L K                                   +FE L NMDQTP+Q +M  ETT+E TGAK  RISTGGE EK R+T+VL V  DG+KV PRII+KGTPF   T  G   + +      +W                                      W D  + + W+   +  RP + S   +RP +LVLDDF+CH++E F   L   AKT V+   GGLT + QPLDR +NK+ KR  R KYT          RSG ++ P  G+V+TW KE W  I+++T+ + FK+CGLTL L GSE H
Sbjct:   88 KLNAATYTRKICPCDGQPVGNNGAAIVLQVPWKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHH 565          
BLAST of mRNA_Ecto-sp13_S_contig12438.2023.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 6.510e-81
Identity = 156/372 (41.94%), Postives = 203/372 (54.57%), Query Frame = 0
Query:   95 MAKLLAEMPTFAGGMPSADDPEKMEKFRRLYNAWYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKFRSVLRK-----------------------------------IFELLYNMDQTPIQADMRSETTVETTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSWWCDGTQSDDWVTQDFTRRPGS-SPRDRRPSVLVLDDFRCHREEKFQQKLASMAKTQVVMRGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRDNFG--RSGNVSAPSRGLVATWVKEVWAGISAQTILSYFKVCGLTLNLRGSEDH 401
            M KLL   P   GGMP+   PE+   F+  +N+WY RF KR+ FSI+R+TSVGQK P+G EG AWA + K R  L K                                   +FE L NMDQTP+Q ++  ETT+E TGAK  RISTGG+ EK R+T+VL V  DG+KV PRII+KGTPF                           R   G+P  G+S GVQ+  W D  + + W++  +  RP + S   +RP +LVLDDF+CH++E F   L   A T V+   G LTP+ QPLDR +NK+ KR  R KYT +        RSG +  P RG+V+TW KE W   + +T+ + F +CGLTL L GSEDH
Sbjct:    1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDH 371          
BLAST of mRNA_Ecto-sp13_S_contig12438.2023.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 9.410e-77
Identity = 171/461 (37.09%), Postives = 231/461 (50.11%), Query Frame = 0
Query:    3 KLEVLKYSRSKCADGNPVGRRGAGKVFGIDPKLARDWETQEGELVA--FSKQSAGKQRSLHPGRESDTQKAEAAVEDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGMPSADDPEKMEKFRRLYNAWYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKFRSVLRK-----------------------------------IFELLYNMDQTPIQADMRSETTVETTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSWWCDGTQSDDWVTQDFTRRP--GSSPRDRRPSVLVLDDFRCHREEKFQQKLASMAKTQVVMRGGGLTPVCQPLDRNINKEFKRGFRAKYTIWI----RDNFGRSGNVSAPSRGLVATWVKEVWAGISAQTILSYFKVCGLTL 393
            KL+V+ ++R  C DG P G  GA KV  +  +   +W   E  L A   +     K + +H   ++     E A+ + IN  RK+         M KLL   P   GG+ +   PE+       + +WY RF KR++FSI+R+TSVGQK P+G EG AWA + K R  L +                                   +FE L NMDQTP+Q +M  ETT+E TGAK  RI+TGG+ EK R+T+ L V  DG+KV  RII+KGTPF                           R+  G P  G+S GVQ+  WCD  +   W+   +  RP  GS  R RR  +LVLDDF+CH+++ F   L   A T V+   GGL P+ QPLDR +NK+ KR  R  YT       RD   ++G +  P RG VATW K  WA I+ + + + FK+CGLTL
Sbjct:   61 KLKVVAFTRVVCEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRR-CILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517          
BLAST of mRNA_Ecto-sp13_S_contig12438.2023.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 4.050e-76
Identity = 156/401 (38.90%), Postives = 205/401 (51.12%), Query Frame = 0
Query:   95 MAKLLAEMPTFAGGMPSADDPEKMEKFRRLYNAWYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKFR-----------------------------------SVLRKIFELLYNMDQTPIQADMRSETTVETTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSWWCDGTQSDDWVTQDFTRRPGS-SPRDRRPSVLVLDDFRCHREEKFQQKLASMAKTQVVMRGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRDNFG--RSGNVSAPSRGLVATWVKEVWAGISAQTILSY-----------------------------FKVCGLTLNLRGSEDH 401
            M KLL   P   GGM +   P +   F+   N+WY RF KR+ FSI+R+TSVGQK P+G+EG AWA + K R                                   SV  ++F+ L NMDQTP+Q +M  ETT+E TGAK  RISTGG+ EK R+T+VL V  DG+KV PRII+KGTPF                           R    +P  G+S GVQ+  W D  + + W++  +  RP + S   +RP +LVLDDF+CH++E +   L   A T V++  GGLTP+ QPLDR +NK+ KR  R KYT +        RSG +  P RG+V+TW KE W  I+ +T+ S                              FK+CGLTL L GSEDH
Sbjct:    1 MNKLLELKPNALGGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDH 400          
BLAST of mRNA_Ecto-sp13_S_contig12438.2023.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 3.900e-68
Identity = 174/513 (33.92%), Postives = 229/513 (44.64%), Query Frame = 0
Query:    3 KLEVLKYSRSKCADGNPVGRRGAGKVFGIDPKLARDWETQEGELVAFSKQSA--GKQRSLHPGRESDTQKAEAAVEDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGMPSADDPEKMEKFRRLYNAWYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKFR-----------------------------------SVLRKIFELLYNMDQTPIQADMRSETTVETTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSWWCDGTQSDDWVTQDFTRRPG-SSPRDRRPSVLVLDDFRCHREEKFQQKLASMAKTQVVMRGGGLTPVCQPLDRNINKEFKRGFRAKY------------------------------------------------TIWIRDNFG--RSGNVSAPSRGLVATWVKEVWAGISAQTILSYFKVCGLTLNLRGSED 400
            KL   +++R  C DG PVG  GA KV G+D +    W  +E  +    K+     K +S+H G    T + E  +ED IN                    ++   AG         ++  FR  +  WY+ F +RH FSI+R+TSVGQK P G+EG A+A + K R                                   SV  K+FE L NMDQTP+Q +M  ETT+E  G K  RISTGG+ EK R+T  L V  DG KV  RII+KG PF                           RT FGYP +G+   VQ+  WCD  +   W+++ +  RP   S   +R S+LVLDDFRCHR E F + L     T V++  GGLTP+ QPLDR +NKE KR  R                                                   T ++       ++G +  P RGLV+T  KE WA I+ +T+   FKVCGLTL L GSED
Sbjct:    4 KLTAAEFTRVLCEDGQPVGNSGAAKVLGVDRRRVITWIGEEATMKKLVKEKPKLSKAKSIHVGMAPTTAEVEQDLEDCINE-------------------QLAASAG---------EILAFRTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGK-EKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGKLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSED 487          
BLAST of mRNA_Ecto-sp13_S_contig12438.2023.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 1.320e-64
Identity = 156/467 (33.40%), Postives = 213/467 (45.61%), Query Frame = 0
Query:    3 KLEVLKYSRSKCADGNPVGRRGAGKVFGIDPKLARDWETQEGELVA--FSKQSAGKQRSLHPGRESDTQKAEAAVEDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGMPSADDPEKMEKFRRLYNAWYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKFRSVLRK-----------------------------------IFELLYNMDQTPIQADMRSETTVETTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSWWCDGTQSDDWVTQDFTRRP--GSSPRDRRPSVLVLDDFRCHREEKFQQKLASMAKTQVVMRGGGLTPVCQPLDRNINKEFKR--GFRAKYTIWIRDNFGRSGNVSAPSRGLVATWVKEVWAGISAQTILSYFKVCGLTLNLRGSEDH 401
            KL+ + ++R  C DG PVG  GA KV  +  +   +W   E  L A   +     K + +H G ++ T   E A+ + IN  RK+       L                           F+  + +WY RF KR++F+I+R+TSVGQK P+G EG AWA + K R  L +                                   +FE L NMDQTP+Q               H R + G E E  R+T+ L V  DG+KV  RII+KGTPF                           R+  G P  G+S GVQ+  WCD  +   W+   +  RP  GS  R RR  +LVLDDF+CH+++ F   L   A T V+   GGLTP+ Q LDR +NK+ KR                 ++G ++ P RG VATW K  WA I+ +T+ + FK+CGLTL L GSEDH
Sbjct:   74 KLKAVAFTRVVCEDGKPVGNSGAAKVLDVPRRRIVEWVRDEESLRANVSANPKLSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCEEALA--------------------------FKSKFKSWYQRFRKRNKFNIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQ---------------HERDAGGKEKE--RFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRR-CILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDH 496          
BLAST of mRNA_Ecto-sp13_S_contig12438.2023.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 6.120e-61
Identity = 119/268 (44.40%), Postives = 158/268 (58.96%), Query Frame = 0
Query:  163 QKFRSVLRKIFELLYNMDQTPIQADMRSETTVETTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSWWCDGTQSDDWVTQDFTRRPGS-SPRDRRPSVLVLDDFRCHREEKFQQKLASMAKTQVVMRGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRD-NFGRSGNVSAPSRGLVATWVKEVWAGISAQTILSYFKVCGLTLNLRGSEDH 401
            ++  SV  ++FE L NMDQTP+Q +M  ETT+E TGAK  R+STGGE EK R+T+VL V  DG+KV  RII+ GTPF                           R   G+P  G+S GVQ+  W D  + + W +  +  RP + S   +RP +LVLDDF+CH++E F   L   A T V+   GGLTP+ QPLDR +NK+ KR  R+KYT +       RSG +  P RG+V+TW K  W  I+ +T+ + FK+CGLTL L GSEDH
Sbjct:   38 EQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGE-EKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDH 304          
BLAST of mRNA_Ecto-sp13_S_contig12438.2023.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 1.820e-60
Identity = 152/413 (36.80%), Postives = 204/413 (49.39%), Query Frame = 0
Query:   57 QRSLHPGRESDTQKAEAAVEDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGMPSADDPEKMEKFRRLYNAWYYRFLKRHRFSIQRKTSVGQKKPEGWEGKAWAFIQKFRSVLRK-----------------------------------IFELLYNMDQTPIQADMRSETTVETTGAKHVRISTG-GE----------------------AEKLRYTVVLTVRGDGQKVLPRIIYKGTPF--RT--SFGYPPAGISLGVQKSWWCDGTQSDDWVTQDFTRRP--GSSPRDRRPSVLVLDDFRCHREEKFQQKLASMAKTQVVMRGGGLTPVCQPLDRNINKEFKRGFRAKYTI----WIRDNFGRSGNVSAPSRGLVATWVKEVWAGISAQTILSYFKVCGLTLNLRGSEDH 401
            +RS   G+++D    E A+ + IN  RK+        VM KLL   P   GG+ +   PE+   F+  + +WY RF KR++FSI+R+TSVGQK P+G EG AWA + K R  L +                                   +FE L NMDQTP+Q +M  ETT+E  GAK  RI+TG GE                      + ++R +  L   G               +  RT  S G P      GVQ+  WCD  +   W+   +  RP  GS  R RR  +LVLDDF+CH+++ F   L   A T V+   GGLTP+ QPLDR +NK+ KR  R  YT       RD   ++GN++ P RG VATW K  WA I+ +T+ + FK+CGLTL L GSEDH
Sbjct:  115 ERSGAVGKKADI---EEALVEFINDQRKHHVGCGSMAVMNKLLELKPDALGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLEKAGAKDARIATGAGEKRRNASRSAWLPRRMARSRLASSSRVRLSFRLPRPGXXXXXXXXXXXXXXXYFPRTAPSTGSPWEACPSGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRR-CILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDP--KTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDH 521          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12438.2023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHT8_9PHAE9.480e-8638.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE9.250e-8438.21DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE5.630e-8338.13DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE6.510e-8141.94DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE9.410e-7737.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUK2_9PHAE4.050e-7638.90DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE3.900e-6833.92Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEE8_9PHAE1.320e-6433.40DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE6.120e-6144.40DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KYG9_9PHAE1.820e-6036.80DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 214..385
e-value: 2.6E-11
score: 43.5
NoneNo IPR availablePANTHERPTHR19303TRANSPOSONcoord: 22..400
NoneNo IPR availablePANTHERPTHR19303:SF23POGO TRANSPOSABLE ELEMENT WITH KRAB DOMAINcoord: 22..400

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12438contigEcto-sp13_S_contig12438:2670..4622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12438.2023.1mRNA_Ecto-sp13_S_contig12438.2023.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12438 2643..4622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12438.2023.1 ID=prot_Ecto-sp13_S_contig12438.2023.1|Name=mRNA_Ecto-sp13_S_contig12438.2023.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=401bp
MQKLEVLKYSRSKCADGNPVGRRGAGKVFGIDPKLARDWETQEGELVAFS
KQSAGKQRSLHPGRESDTQKAEAAVEDEINTLRKNGAAVTRDLVMAKLLA
EMPTFAGGMPSADDPEKMEKFRRLYNAWYYRFLKRHRFSIQRKTSVGQKK
PEGWEGKAWAFIQKFRSVLRKIFELLYNMDQTPIQADMRSETTVETTGAK
HVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPFRTSFGYPPAGI
SLGVQKSWWCDGTQSDDWVTQDFTRRPGSSPRDRRPSVLVLDDFRCHREE
KFQQKLASMAKTQVVMRGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRD
NFGRSGNVSAPSRGLVATWVKEVWAGISAQTILSYFKVCGLTLNLRGSED
H
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom