prot_Ecto-sp13_S_contig87458.20218.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig87458.20218.1
Unique Nameprot_Ecto-sp13_S_contig87458.20218.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length76
Homology
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BLAST of mRNA_Ecto-sp13_S_contig87458.20218.1 vs. uniprot
Match: B5LWJ3_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWJ3_9PHYC)

HSP 1 Score: 71.6 bits (174), Expect = 1.960e-14
Identity = 34/76 (44.74%), Postives = 54/76 (71.05%), Query Frame = 0 
Query:    1 MIFSVNGVLSIIAAYVNIFTIASVLDLSSETTRRYAQFGVIQATLLFSFAFAVIPKKFPCLVATALFFVFEMKNLV 76
            MI S+NG+LS+ AAYVN+  IA  LD+ +E +R  A+  +++   L+SFA+++ P K  C ++ A+FFVFE+KN +
Sbjct:   29 MILSLNGLLSVAAAYVNLVQIALFLDIDTENSRTIAKHPIMRLLFLYSFAYSITPNKMACALSVAIFFVFEVKNFI 104
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig87458.20218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
B5LWJ3_9PHYC1.960e-1444.74Uncharacterized protein n=1 Tax=Feldmannia species... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..44
NoneNo IPR availableTMHMMTMhelixcoord: 2..24
NoneNo IPR availableTMHMMTMhelixcoord: 39..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig87458contigEcto-sp13_S_contig87458:74..301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig87458.20218.1mRNA_Ecto-sp13_S_contig87458.20218.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig87458 62..301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig87458.20218.1 ID=prot_Ecto-sp13_S_contig87458.20218.1|Name=mRNA_Ecto-sp13_S_contig87458.20218.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=76bp
MIFSVNGVLSIIAAYVNIFTIASVLDLSSETTRRYAQFGVIQATLLFSFA
FAVIPKKFPCLVATALFFVFEMKNLV
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