prot_Ecto-sp13_S_contig8744.20215.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8744.20215.1
Unique Nameprot_Ecto-sp13_S_contig8744.20215.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length382
Homology
BLAST of mRNA_Ecto-sp13_S_contig8744.20215.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI)

HSP 1 Score: 446 bits (1146), Expect = 6.800e-144
Identity = 301/331 (90.94%), Postives = 302/331 (91.24%), Query Frame = 0
Query:    1 MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXXXMRDAKKALVEGKSPFEAYQQRATFDPSRREQGGXXXXXXXXXXXKMVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAKEIAARSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---KSSGPANVPSTPMTPRELREKLRQPPSPSPTAGRADLPSASSA 328
            MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXXXMRDAKKALVEGKSPFEAYQQRAT D SRR Q              MVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAKEIA RS Q  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   KSSGPANVP TPMTPRELREKLRQP SPSP AGR DLP+ SSA
Sbjct:  121 MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXXXMRDAKKALVEGKSPFEAYQQRATSDASRRGQ--------------MVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAKEIATRSLQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSGPANVPLTPMTPRELREKLRQPSSPSPAAGRVDLPATSSA 437          
BLAST of mRNA_Ecto-sp13_S_contig8744.20215.1 vs. uniprot
Match: A0A6H5KEQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ7_9PHAE)

HSP 1 Score: 450 bits (1158), Expect = 9.690e-144
Identity = 296/328 (90.24%), Postives = 297/328 (90.55%), Query Frame = 0
Query:    1 MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXXXMRDAKKALVEGKSPFEAYQQRATFDPSRREQGGXXXXXXXXXXXKMVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAKEIAARSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSGPANVPSTPMTPRELREKLRQPPSPSPTAGRADLPSASSA 328
            MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXX  MRDAKKAL EGKSPFEAYQQRAT DPS R QGGXXXXXXXX   K+VVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAK IA RS Q            XXXXXXXXXXXXXXXXXXXX SSGPANVPSTPMTPRELREKLRQPPSPSP AGR D    SSA
Sbjct:  287 MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXLDMRDAKKALAEGKSPFEAYQQRATSDPSTRGQGGXXXXXXXX---KVVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAKAIATRSLQAAVAAGAKRAPTXXXXXXXXXXXXXXXXXXXXXSSGPANVPSTPMTPRELREKLRQPPSPSPMAGRVDRSPTSSA 611          
BLAST of mRNA_Ecto-sp13_S_contig8744.20215.1 vs. uniprot
Match: A0A7S4DG20_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG20_HETAK)

HSP 1 Score: 192 bits (489), Expect = 1.100e-55
Identity = 93/132 (70.45%), Postives = 106/132 (80.30%), Query Frame = 0
Query:    1 MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIV 132
            +QP+A+QGW+EY KLEEE G L  CS+IL RGL FC YSE+LLIKA+K  ER G L  AR LL+RLK  G+E VWRTVLEGALLEAR+G + VARKV KYLM  VPWYGPIY+EAFRLEEK EHF SAL I+
Sbjct:   96 LQPYAAQGWLEYAKLEEEGGHLETCSRILHRGLMFCHYSESLLIKAIKHFERLGQLRPARVLLARLKRAGVEKVWRTVLEGALLEARAGRSAVARKVFKYLMQQVPWYGPIYFEAFRLEEKNEHFRSALQII 227          
BLAST of mRNA_Ecto-sp13_S_contig8744.20215.1 vs. uniprot
Match: A0A2R5GDZ7_9STRA (Pre-mRNA-splicing factor CLF1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDZ7_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.140e-55
Identity = 135/243 (55.56%), Postives = 160/243 (65.84%), Query Frame = 0
Query:    2 QPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXXXMRDAKKALVEGKSPFEAYQQ----RATFDPSRREQGGXXXXXXXXXXXKMVVCS--RAKETVEKAKDCISKELVWKVHFEAAQIEER 238
            QPFA QGW+EY K+EEE G L  C  IL+RGL +C Y+E LL KA+K EER GNLD AR LLSRL+   +EN WRT+LEGALLEAR+GN  VARKV KYLM +VPWYGPIY+EA R EEK E F+ A+AIV      XXXXXXXXXXXXXXXXXX M  A +A    K+   A +     R   D +R                  V C   + +  +++A +CISKELVWKVHFEAAQ+ ER
Sbjct:  794 QPFAHQGWLEYSKMEEECGRLLHCRSILQRGLEYCNYAEQLLTKAIKHEERLGNLDNARALLSRLRSQNVENAWRTILEGALLEARAGNIIVARKVFKYLMENVPWYGPIYFEATRFEEKNEEFDRAIAIVEKGLKEXXXXXXXXXXXXXXXXXXEMEQAIRAASGAKAQQVARESCQLLRKEEDRARFVLQDMFGVDDACFVVNTVPCKLLQTRGALQRAMNCISKELVWKVHFEAAQVAER 1036          
BLAST of mRNA_Ecto-sp13_S_contig8744.20215.1 vs. uniprot
Match: A0A7S4PH40_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PH40_9EUKA)

HSP 1 Score: 193 bits (491), Expect = 2.050e-55
Identity = 107/253 (42.29%), Postives = 145/253 (57.31%), Query Frame = 0
Query:    1 MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXXXMRDAKKALVEGK-------SPFEAYQQRATFDPSRREQGGXXXXXXXXXXXKMVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLA-SVCAK 245
            MQPFASQGW+E+ K+EEE GD+ RC ++L RGL FC Y+E LL+K +K +ER GN+  AR LLSRLK V ++  W+  LEGAL+EAR+GN +VARKV KYLM HVPW+GP+Y EA R EE+ E++E ++ I+                             +K LV          +  +AY++  T        GG                 + +ETV++A   I+KEL+WKV FEAAQ+EER    +C K
Sbjct:   89 MQPFASQGWLEHAKMEEECGDMERCGRVLNRGLFFCPYNENLLVKGIKHQERIGNIQAARALLSRLKRVTVDRTWKATLEGALMEARNGNGEVARKVFKYLMQHVPWHGPVYLEASRFEEREENYEKSIKII-----------------------------EKGLVGNPRYAPLWFAALKAYEKCETI-------GGI---------------QKVRETVQRAVKVITKELIWKVWFEAAQVEERSCWRICEK 290          
BLAST of mRNA_Ecto-sp13_S_contig8744.20215.1 vs. uniprot
Match: A0A7R9VVS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVS4_9STRA)

HSP 1 Score: 182 bits (462), Expect = 4.830e-53
Identity = 83/119 (69.75%), Postives = 102/119 (85.71%), Query Frame = 0
Query:    1 MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLE 119
            +QP+ASQGW+E+ KLEEE GDL +C+ +L  GL++CEY+E LL KA+K EER G+L  AR+LL+RLKHVGIE VWRTVLEGALLEAR+GN  +AR+VLKYLM HVPWYGP+Y EA+RLE
Sbjct:   39 LQPYASQGWLEFSKLEEESGDLDKCACLLNEGLSYCEYNENLLTKAIKHEERMGDLTRARQLLARLKHVGIEQVWRTVLEGALLEARAGNVAMARRVLKYLMHHVPWYGPLYLEAYRLE 157          
BLAST of mRNA_Ecto-sp13_S_contig8744.20215.1 vs. uniprot
Match: A0A7S4ITD3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ITD3_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.360e-52
Identity = 127/247 (51.42%), Postives = 155/247 (62.75%), Query Frame = 0
Query:    1 MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXXXMRDAKKALVEGKSPFEAYQQRATFDPSRREQGGXXXXXXXXXXXKMVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLA-SVCAKE 246
            +QP+ASQGW+E+ KLEEE G+L RC+ +L  GL++CEY+E LL KA+K EER GNL  AR+LL+RLKHVGIE VWRTVLEGALLEAR+GN  +AR+VLKYLM HVPWYGP+Y EA+RLE  A+    ALAIV     XXXXXXXXXXXXXXX     + D    L                                          R  + +++A   IS+EL+WKVH EAAQ +ER A  V AK+
Sbjct: 1087 LQPYASQGWLEFSKLEEESGNLERCASLLSEGLSYCEYNENLLTKAIKHEERMGNLTRARQLLARLKHVGIEKVWRTVLEGALLEARAGNVGMARRVLKYLMHHVPWYGPLYLEAYRLERDADRPIEALAIVERGLSXXXXXXXXXXXXXXXCEGMDIADGALELP-----------------------------------------RTSQMLDRATKSISRELLWKVHLEAAQAQERAALMVVAKD 1292          
BLAST of mRNA_Ecto-sp13_S_contig8744.20215.1 vs. uniprot
Match: A0A7S2Y4L6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y4L6_9STRA)

HSP 1 Score: 191 bits (485), Expect = 6.150e-51
Identity = 110/246 (44.72%), Postives = 139/246 (56.50%), Query Frame = 0
Query:    1 MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXXXMRDAKKALVEGKSPFEAYQQRATFDPSRREQGGXXXXXXXXXXXKMVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAKE 246
            +QPFASQGW+EY KLEE+ G ++R S IL  GL +CEYSETLL +AVK +E+ GNL  AR +L+RLKHVGI+ VWRTVLEGALLEAR+GN D+AR+VLKYLM HVPWYGP+Y EA++LE    H   A+ IV                         +                Y++    D + R+                    R    +E+AK  ISKELVWK+H EAA + ER A    +E
Sbjct:   70 LQPFASQGWLEYSKLEEDCGFMNRVSNILHAGLEYCEYSETLLTRAVKHQEKMGNLSSARGILARLKHVGIDKVWRTVLEGALLEARAGNHDMARRVLKYLMHHVPWYGPLYLEAYKLERDQGHPMDAMHIVERG----------------------LTTXXXXXXXXXXXXXLYEE---MDVTERQ----------------FHLPRTMHMIERAKSTISKELVWKLHLEAAHMLERTALAYVEE 274          
BLAST of mRNA_Ecto-sp13_S_contig8744.20215.1 vs. uniprot
Match: W7TFT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFT0_9STRA)

HSP 1 Score: 193 bits (491), Expect = 6.950e-51
Identity = 131/244 (53.69%), Postives = 156/244 (63.93%), Query Frame = 0
Query:    1 MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXXXMRDAKKALVEGKSPFEAYQQRATFDPSRREQGGXXXXXXXXXXXKMVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCA 244
            +QP A+Q W+ Y ++EEE GD+ R   IL++GL FCEYSE+LL +A+K  ER G+L  AR LLSRL+HV I+ VWRTVLEGALLEAR+GN  VARKV +YL+  VPWYGPIY EAFRLEEK +   +ALAIV     XXXXXXXXXXXXXXXXXXXX    K A+  G  P                                    R ++ + +A   ISKEL+WKVHFEAAQIEER AS  A
Sbjct:  673 LQPHAAQAWLVYSRMEEECGDVERADGILQKGLLFCEYSESLLARALKHAERKGDLRFARSLLSRLRHVSIDKVWRTVLEGALLEARAGNNRVARKVFEYLIGCVPWYGPIYNEAFRLEEKCQGHAAALAIVERGLKXXXXXXXXXXXXXXXXXXXXXDAGKDAVAHGLVPD---------------------------------LPRTRDMISRALGSISKELIWKVHFEAAQIEERAASTAA 883          
BLAST of mRNA_Ecto-sp13_S_contig8744.20215.1 vs. uniprot
Match: L8GMK0_ACACA (Tetratricopeptide repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GMK0_ACACA)

HSP 1 Score: 187 bits (474), Expect = 8.560e-49
Identity = 114/239 (47.70%), Postives = 141/239 (59.00%), Query Frame = 0
Query:    1 MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIVXXXXXXXXXXXXXXXXXXXXXXXXXMRDAKKALVEGKSPFEAYQQRATFDPSRREQGGXXXXXXXXXXXKMVV--CSRAKETVEKAKDCISKELVWKVHFEAAQIEE 237
            +QP ASQGW+EY KLEEE G L++C  IL  GLT C YSE+LL+KA+K EER GNL GAR L+SRLK   +E  W+TVLEG LLEAR+GN  VAR+V KYL+ HVPWYGPI+ EAFRLEE+ EH   A  +V                             +K L E              +P       XXXXXXXX   + +    +  + TV++A  C+ KELVWK+HFE AQ+EE
Sbjct:  400 LQPSASQGWLEYAKLEEECGRLTKCRDILLEGLTHCPYSESLLVKALKHEERIGNLPGARSLMSRLKAESVERTWKTVLEGGLLEARAGNLHVAREVFKYLIRHVPWYGPIFNEAFRLEERHEHHRRASVLV-----------------------------EKGLEE--------------NPRXXXXXXXXXXXXXXLAYEQLSGDLTALRNTVKRALACVPKELVWKIHFEHAQVEE 595          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8744.20215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN71_ECTSI6.800e-14490.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEQ7_9PHAE9.690e-14490.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4DG20_HETAK1.100e-5570.45Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2R5GDZ7_9STRA1.140e-5555.56Pre-mRNA-splicing factor CLF1 n=1 Tax=Hondaea ferm... [more]
A0A7S4PH40_9EUKA2.050e-5542.29Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A7R9VVS4_9STRA4.830e-5369.75Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S4ITD3_9STRA1.360e-5251.42Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2Y4L6_9STRA6.150e-5144.72Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
W7TFT0_9STRA6.950e-5153.69Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
L8GMK0_ACACA8.560e-4947.70Tetratricopeptide repeat domain containing protein... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..167
e-value: 3.5E-17
score: 64.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..158
NoneNo IPR availablePANTHERPTHR11246:SF20TPR-CONTAINING PROTEIN DDB_G0280363coord: 2..157
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 2..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8744contigEcto-sp13_S_contig8744:3347..6504 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8744.20215.1mRNA_Ecto-sp13_S_contig8744.20215.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8744 2551..6516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8744.20215.1 ID=prot_Ecto-sp13_S_contig8744.20215.1|Name=mRNA_Ecto-sp13_S_contig8744.20215.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=382bp
MQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQE
ERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKY
LMTHVPWYGPIYYEAFRLEEKAEHFESALAIVQRGLQEIPRYGPLWFGAF
RLSEKLDMRDAKKALVEGKSPFEAYQQRATFDPSRREQGGSGSGGGGGGG
GKMVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAKEIAAR
SSQAAAAAGAKRTPPTAAAAAAGGGATTAASPAAAKSSGPANVPSTPMTP
RELREKLRQPPSPSPTAGRADLPSASSAVAAADSAAVPEAAAAAAAATSG
GGGGGGGGGGGGGTAAAAGELGLAQQRRAPT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf