mRNA_Ecto-sp13_S_contig8671.20121.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8671.20121.1
Unique NamemRNA_Ecto-sp13_S_contig8671.20121.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: D7FPP6_ECTSI (CSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP6_ECTSI)

HSP 1 Score: 462 bits (1189), Expect = 2.080e-149
Identity = 265/290 (91.38%), Postives = 267/290 (92.07%), Query Frame = 1 
Query:  640 ERWQKHAQALSGXXXXXXXXXYNAQQRHGQQNQRPEASGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKITGAAPPEEPPAADDTTALPEGEVQPADATEGGDRTDV---------SPETEAAVAGVDDAAGTSAXXXXXXXXXXXAVRSTQPAPAGDDKGDRAAPLGLQGAMVTYLVTDGLEEDAGSRFRRGDEVRFKVN 1482
            ERWQKHAQALSG  XXXXXX YNAQQRHGQQNQRPEASGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQE+QQSEGLIKITGAAPPEEP AADDTTA PEGEVQPADATEGGD T           SPETEAAVAGVDDAAGTSA  XXXXXXXX AVRSTQP  AGDDKGD AAPLGLQGAMVTYLVTDGLEEDAGSRFRRGDEVRFKV+
Sbjct:  120 ERWQKHAQALSGRSXXXXXX-YNAQQRHGQQNQRPEASGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEYQQSEGLIKITGAAPPEEP-AADDTTAPPEGEVQPADATEGGDGTXXXXXXXXXXXSPETEAAVAGVDDAAGTSAPAXXXXXXXXVAVRSTQPTLAGDDKGDTAAPLGLQGAMVTYLVTDGLEEDAGSRFRRGDEVRFKVS 407
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BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: A0A6H5L4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q3_9PHAE)

HSP 1 Score: 466 bits (1198), Expect = 2.620e-146
Identity = 254/281 (90.39%), Postives = 257/281 (91.46%), Query Frame = 1 
Query:  640 ERWQKHAQALSGXXXXXXXXXYNAQQRHGQQNQRPEASGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKITGAAPPEEPPAADDTTALPEGEVQPADATEGGDRTDVSPETEAAVAGVDDAAGTSAXXXXXXXXXXXAVRSTQPAPAGDDKGDRAAPLGLQGAMVTYLVTDGLEEDAGSRFRRGDEVRFKVN 1482
            ERWQKHAQALSG XXXXXXXX  AQQRHGQQNQRPEA GEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRS+PSSMPSTHRANMMGRSRPQE QQSEGLIKITGAAPPE+PPAA DTTA PE EVQPADATEGGD TD S ETEAAVAGVDDAAGTSA           AVRSTQPAPAGD KGDRAAPLGLQGAMVTYLVTD LEEDAGSRFRRGDEVRFKV+
Sbjct:  118 ERWQKHAQALSGRXXXXXXXXXXAQQRHGQQNQRPEAGGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSHPSSMPSTHRANMMGRSRPQESQQSEGLIKITGAAPPEDPPAASDTTAPPEREVQPADATEGGDGTDTSFETEAAVAGVDDAAGTSAPAATPETEEAVAVRSTQPAPAGDGKGDRAAPLGLQGAMVTYLVTDSLEEDAGSRFRRGDEVRFKVS 398
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BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: A0A7S2SQY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY9_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.320e-20
Identity = 46/88 (52.27%), Postives = 67/88 (76.14%), Query Frame = 1 
Query:  760 REQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRS 1023
            RE G+V S+KE FGF+RC+ RPGDLFFH++EAP +I VGDEV+F +   +R G+ CA  ++ LP GTV  E +L+ S++G+++R IR+
Sbjct:   26 RECGKVKSLKEKFGFIRCVGRPGDLFFHISEAPRDIEVGDEVEFAVDT-SRDGRLCAKAIDTLPRGTVQFEDVLETSYVGIVDRGIRN 112
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BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: K3WP78_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP78_GLOUD)

HSP 1 Score: 99.8 bits (247), Expect = 2.550e-18
Identity = 55/121 (45.45%), Postives = 74/121 (61.16%), Query Frame = 1 
Query:  763 EQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKITGA 1125
            E+G V SIKESFGFV C+DR GDLFFH+TEAP ++ + DEV+F I    RS KD A +L  LP GT+  E I +  F G++ R +RS  S     + A        Q+ +++ GLI+I  A
Sbjct:  174 EKGIVVSIKESFGFVSCVDREGDLFFHITEAPVDVQLQDEVEFRIKYNQRSAKDIACQLVTLPKGTIVLEDISEEFFEGIVTRGVRSSSSYSSXXYDARQQ-----QQREETHGLIEIAKA 289
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BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: A0A5D6XH35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH35_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 7.280e-17
Identity = 49/104 (47.12%), Postives = 66/104 (63.46%), Query Frame = 1 
Query:  760 REQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPS------SMPSTHR 1053
            +EQG V +IKESFGFV CMDR GDLFFH+TEAP ++ + DEV+F +    RS ++ A +L  LP G++  E + D    GV+ R +RS P+      S P T R
Sbjct:  148 KEQGVVIAIKESFGFVSCMDRDGDLFFHITEAPVDVQLHDEVEFRVKFNQRSSREMACQLVALPKGSIVQEDVADEFLDGVVTRALRSAPNYHNASDSRPQTQR 251
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BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: A0A484E9J3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E9J3_BRELC)

HSP 1 Score: 90.9 bits (224), Expect = 1.720e-15
Identity = 52/118 (44.07%), Postives = 71/118 (60.17%), Query Frame = 1 
Query:  763 EQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKI 1116
            EQG V SIKESFGFV  ++R GDLFFH++EAP  I V DEV+F I    RS K+ A +L  LP GT+  E I D  +LG++ + +   P    S   +N   R + +  ++  GLI+I
Sbjct:  150 EQGFVVSIKESFGFVSSLERDGDLFFHISEAPVEIQVHDEVEFQIKYNQRSDKEMACQLVALPKGTIQVEEISDDFYLGIVTKSLSLGPHQGGSRGYSN--NRDQDRRLREEHGLIEI 265
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BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: G4Z9V3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z9V3_PHYSP)

HSP 1 Score: 90.1 bits (222), Expect = 3.080e-15
Identity = 56/143 (39.16%), Postives = 79/143 (55.24%), Query Frame = 1 
Query:  751 SGERE----QGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKITGAAPPEEPPAADDTTA 1167
            SG RE    QG V SIKE+FGFV C++R GDLFFH++EAP ++ + DEV+F +    RS K+ A +L  LP GT+  E + D  F GV+ +   S P       R     R   +  ++  GLI++  A    E   A++T A
Sbjct:  158 SGARELPVKQGFVVSIKENFGFVSCLERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIKVEEVSDELFDGVVTK---SLPRGGHGGGRGFFNNRDDDRHQREEHGLIEVKKAPEQGEDAKAEETAA 297
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BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: M4C6A3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C6A3_HYAAE)

HSP 1 Score: 89.0 bits (219), Expect = 6.430e-15
Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = 1 
Query:  775 VCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSE--GLIKI 1116
            + SIKE+FGFV C+DR GDLFFH++EAP +I + DEV+F +    RS KD A +L  LP GT+  E+I D    G++ +       S+P   R N  G      H   E  GLI+I
Sbjct:    1 MVSIKETFGFVSCLDREGDLFFHISEAPVDIQLHDEVEFRVKYNQRSDKDVACQLVALPKGTIKVEVINDEVIDGIVTK-------SLPRGGRGNGRGSFNGDRHHNREEHGLIEI 109
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BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: A0A6A4EEB2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EEB2_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.190e-15
Identity = 51/133 (38.35%), Postives = 76/133 (57.14%), Query Frame = 1 
Query:  763 EQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKITGAAPPEEPPAADDT 1161
            +QG V SI+E+FGFV C++R GDLFFH++EAP  + + DEV+F + +  RS K+ A +L  LP GT+  E + D    GV+ +   S P    +  R    GR   +  ++  GLI++   A  E   AA+ T
Sbjct:  178 QQGFVVSIRENFGFVSCLERDGDLFFHMSEAPVGVQLQDEVEFRVKLNQRSDKEMACQLVALPKGTIQVEELSDELVDGVVTK---SLPRGGHAGGRGFFNGRDDDRHQREEHGLIEVKREAETEVEAAAEQT 307
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BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: A0A662X4D1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4D1_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 9.920e-15
Identity = 56/134 (41.79%), Postives = 79/134 (58.96%), Query Frame = 1 
Query:  763 EQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDI-RSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKITGAAPPEEPPAADDT 1161
            E+G V SIKE+FGFV CM+R GDLFFH+TEAP ++ + DEV+F +    RS K+ A +L  LP GT+  E + +  F GV+ + + R   +S  S +R +     R + H    GLI+   A  PEE    DD+
Sbjct:  293 ERGFVVSIKENFGFVSCMEREGDLFFHITEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVGLPKGTIVVEDVSEEFFDGVVTKSLPRGGNNSYNSYNRDDTRHSQRDEPH----GLIE---AVTPEENEGQDDS 419
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPP6_ECTSI2.080e-14991.38CSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L4Q3_9PHAE2.620e-14690.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SQY9_9STRA1.320e-2052.27Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
K3WP78_GLOUD2.550e-1845.45Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XH35_9STRA7.280e-1747.12Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A484E9J3_BRELC1.720e-1544.07Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
G4Z9V3_PHYSP3.080e-1539.16Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
M4C6A3_HYAAE6.430e-1543.10Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A6A4EEB2_9STRA7.190e-1538.35Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A662X4D1_9STRA9.920e-1541.79Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8671contigEcto-sp13_S_contig8671:6..6394 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score469.2
Seed ortholog evalue2.4e-129
Seed eggNOG ortholog2880.D7FPP6
Preferred nameCSDE1
Model size1487
KEGG koko:K19721
KEGG Pathwayko04974,map04974
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000956,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0007275,GO:0007548,GO:0007549,GO:0008150,GO:0008152,GO:0008406,GO:0008584,GO:0009047,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0012505,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019222,GO:0019439,GO:0022414,GO:0022607,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034655,GO:0040029,GO:0042714,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0045137,GO:0046483,GO:0046546,GO:0046661,GO:0046700,GO:0048513,GO:0048519,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0061458,GO:0065003,GO:0065007,GO:0070937,GO:0070966,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:2000112,GO:2000113
Exons10
EggNOG free text desc.nuclear-transcribed mRNA catabolic process, no-go decay
EggNOG OGs28K4H@1,2QSJ1@2759
Cds size1485
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00536
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8671.20121.1prot_Ecto-sp13_S_contig8671.20121.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8671 6..6394 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464139.4522066-CDS-Ecto-sp13_S_contig8671:5..1301681464139.4522066-CDS-Ecto-sp13_S_contig8671:5..130Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8671 6..130 -
1681464139.4629087-CDS-Ecto-sp13_S_contig8671:549..6541681464139.4629087-CDS-Ecto-sp13_S_contig8671:549..654Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8671 550..654 -
1681464139.4718363-CDS-Ecto-sp13_S_contig8671:1097..12391681464139.4718363-CDS-Ecto-sp13_S_contig8671:1097..1239Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8671 1098..1239 -
1681464139.4806006-CDS-Ecto-sp13_S_contig8671:1716..18441681464139.4806006-CDS-Ecto-sp13_S_contig8671:1716..1844Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8671 1717..1844 -
1681464139.489322-CDS-Ecto-sp13_S_contig8671:2386..24601681464139.489322-CDS-Ecto-sp13_S_contig8671:2386..2460Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8671 2387..2460 -
1681464139.5005245-CDS-Ecto-sp13_S_contig8671:2957..31281681464139.5005245-CDS-Ecto-sp13_S_contig8671:2957..3128Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8671 2958..3128 -
1681464139.5109973-CDS-Ecto-sp13_S_contig8671:3362..36231681464139.5109973-CDS-Ecto-sp13_S_contig8671:3362..3623Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8671 3363..3623 -
1681464139.5214193-CDS-Ecto-sp13_S_contig8671:4153..43141681464139.5214193-CDS-Ecto-sp13_S_contig8671:4153..4314Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8671 4154..4314 -
1681464139.5361607-CDS-Ecto-sp13_S_contig8671:5568..56471681464139.5361607-CDS-Ecto-sp13_S_contig8671:5568..5647Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8671 5569..5647 -
1681464139.5465248-CDS-Ecto-sp13_S_contig8671:6155..63941681464139.5465248-CDS-Ecto-sp13_S_contig8671:6155..6394Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8671 6156..6394 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8671.20121.1

>prot_Ecto-sp13_S_contig8671.20121.1 ID=prot_Ecto-sp13_S_contig8671.20121.1|Name=mRNA_Ecto-sp13_S_contig8671.20121.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=495bp
RLASVLKETQQGRDCGVYPPRQGEEACSQAQDRQSTAEVGQHNSSDIPVV
VMDRRNNGGGGDYAYGDGGGARAGGNRYDRQHGQQSDAGGGGGRWQNDMY
DNTSQQPRRGSHGGGGGGGGYRERGGYQHDQRDHRGDGGGRGRSYGGGGG
DRYGGGGGRRDNARGGGGGFRDNQNDNSFAGQSVQQQNWPTPGAAAGDAR
EGGEGGGGVGGGGERWQKHAQALSGRSGGGGGGGYNAQQRHGQQNQRPEA
SGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIG
MGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTH
RANMMGRSRPQEHQQSEGLIKITGAAPPEEPPAADDTTALPEGEVQPADA
TEGGDRTDVSPETEAAVAGVDDAAGTSAPAASPETEEAVAVRSTQPAPAG
DDKGDRAAPLGLQGAMVTYLVTDGLEEDAGSRFRRGDEVRFKVNK
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mRNA from alignment at Ecto-sp13_S_contig8671:6..6394-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8671.20121.1 ID=mRNA_Ecto-sp13_S_contig8671.20121.1|Name=mRNA_Ecto-sp13_S_contig8671.20121.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6389bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8671:6..6394- (Ectocarpus species13 EcNAP12_S_4_19m)
CGCCTCGCATCGGTACTGAAAGAGACGCAGCAGGGTCGTGATTGCGGCGT
TTACCCTCCGAGACAAGGGGAGGAGGCGTGCAGCCAAGCGCAGGATCGCC
AATCCACAGCAGAAGTAGGACAGCACAACAGCAGCGACATCCCTGTAGTA
GTCATGGATAGACGTAACAACGGAGGCGGTGGGGATTATGCTTATGGTGA
TGGCGGAGGAGCAAGGGCGGGCGGTAATCGCTATGATCGGTGAGCAGCAG
CCTGCAGCCCCCCAGATGTGCATGGCACTGGCAAATTGCCGGTCCTGCGC
ACGGATCGTGTGTGTTTTTAATTCGTTAGTCTGTAGGGCGTAAGGTTGCT
GCAGAAAGTCATTGTCCGACAGCTCTTGATGAAAATGTCCACCAGTTGAA
ACATTTCCGTCGTGTGGTCTTCACTCTCTGGTTGGCGATAGATTCATGTT
TACCCGGTGCCTCTCAAGGTTTGTACTCTGTGACTGGGCTTGTAAATTGT
ACTTCTTGATAAGGAGCTACGGCAGACGAACACGTAAAGTGCTCGGCATG
TTCTTCCAAGACCTGTCTGGCCCAACGGACAATCATCATTCCGGCGAGCA
GCGGCCTGCTATGTGGTAGAAGGCCTCCTTGTGAAGTTGGTGACCGTATT
CGATGCATGCTAGATACCAAGGCTTTGCTCGGTTTCCCCCAAGCGATGTG
ACTCAGGTTGTTCTCGCCCGTCTCGCCTTCTCATGCGTCGCTTACAGCCA
GCACGGCCAGCAGAGCGACGCAGGCGGAGGTGGAGGTCGATGGCAGAACG
ACATGTACGACAACACTTCCCAACAGGTATATTCATCGGCAAGTAGTCAC
ATTAGTGTGAAGCCCCTACTACACGTGGTTGTGGTTTCGTGTGGTGTTGC
TGTATATTTTGTAGATAGATCCCGAAGGTCTTCTCGACGTCTCTGCGCTG
ATCCGGGGGATGCCTTCCAGCCGATAATCGAACGGCGGTCGGCGAGACAT
GGTCTCTGTTCTTTGCATCTCGTCGTGTCTCGGTTCAAGGAGTTTTCGAC
CAAAGTGGGTTGCCACACGTTCAGTTCGTTGAATATAGCCTCGTCCTTTC
ACCTCGGCAGTGCAGCCCCAAAAATCAATGGTATCAGTTAGAAGTTTTGA
GGTGCCCTGCAGAGGTAACACCATACGTATGTATCAACCCTCCTAGTACT
GGAAGCCCAAATAGGGACACTCTGGGGACACAGCACTCAAATGCCTTTCT
ACCGCATCGTGGTCATCACCATGCTCTGCTGCGTGAAACGTGGGTGGAAA
CCGTTGGTCTAGCATGCTTGTGTGAGGTGGTACGCTGTCTGATATTCGAG
TATTGCTGTTGTGATGCCTGTGTGCTTCTCCTGGGTCTCCGACCTGCTGT
GCACAATCTCCCAAGCCGCGGGCCCCCTTGTTGGTAAAACCGCTGGACAC
AGCCTAGTGTTGGAATTTGCTGACTTGGCTTCAGTAAAGAAAGTGTCCCC
AGTGCATTTGGGGACACTTTCCACACTGAAGCCAAGTCAGCCTTCGACCC
TCGAAACTGTACAGCCTCTCGCAATGAGCGGATGCGTTTTTTTCTGGACC
CATGACCTGTAGCTAACTGGGTACTGGGGAGAGTTAACATCCAGCACAAC
TCTATTTACGGCAGAAGAACTTCCATAATGTATCCTCAACCTGCTCATAT
TATCTCAATGCAAGCTTTCTTCCTCACAAGTACTTGCGTCTTGATGTCCC
GCTGAGGCTGACTTCTCCTCATTGGCCAGTCGGTTAGCGCCGTCGATATC
CATTCGAAGCGACACACAAACCACAGACGTATGCATAGCAGACAAAAGCC
ACACCGCCCGACAGAAGAAGAGGGGCTCCGCCGTCCAGATGACGTCCTTG
TTTTTTCCATTCATCGGGACTTTCCTTTCAAGACTGACGCCTACTCAGTT
GTCAACCAGTTGTTGAGGTTAAATACCAGAGACACACACAAGCACGCATG
CACACACCAAATTTTATACCACCTCTTAAGCGTAGCTCGTTTCTCGCCCC
CGATGCCCGGACTCCGGAAACGCCCTACAGCCGCGCCGGGGAAGCCACGG
TGGAGGTGGAGGTGGAGGTGGCTATCGGGAAAGAGGCGGTTACCAGCACG
ACCAGCGCGACCACAGGGGCGACGGGGGGGGAAGGGGGCGGAGCTACGGC
GGTGGAGGGGGTGATCGCTATGGCGGAGGCGGTGGGAGGCGGTGAGATAC
GCTCGGTGATGATGCACTCTAAGATGCGCATTTGATGGTGTGATGTAGTC
GAGAAGAGTCCTGCTACTACCTTAGAGTGCATACAGGGGTCTGTATTGGG
ACGCATGTAGTGCGGCAGTGCGTGTGATATTTGTTGTTCGATTGATCCCG
CGTTTCTTGTCCGTGGTTTGACCTCGTCCAGCACGACTGCAATACGTATT
CGATTTGTTCCACCCCATGTAAAACGTGTTGAATCAGCTTGGGTAAACAA
CAACGGGTTTTCGTTCTTTGTCCGCTTTGACCCAAGCTTGTCCTCTTCGC
TTACGGCAGCAAATCACCCATCCCCCATCCCCATGTGAGGCGAGCACGTC
CCATCCCTTGTGTGTACTCCGTCCCCCCTCCTCCTCTTAAACGGATCGTT
GTCTCGGGTAACAATGCCGTTGATGGAAGTGCAATCCCCGCTTCCCTTGT
CGTCGTCTATACTCGATGCCTCGATTTCTCGCGTCACCACGGTTATTCTA
CCGTACCGGACCGTGCTACAGGGACAATGCCCGTGGTGGTGGCGGCGGTT
TCAGGGACAACCAGAACGACAACTCCTTCGCCGGTCAGTCGGTACAACAA
CAAAACTGGCCTACCCCAGGCGCAGCCGCCGGGGATGCTAGGGAGGGGGG
AGAGGGGGGCGGGGGCGTTGGCGGAGGCGGTGAACGCTGGCAGAAGCACG
CGCAGGCGCTAAGTGGGAGGAGCGGCGGCGGTGGTGGTGGTGGCTACAAC
GCGCAGCAGCGTCACGGGCAACAAAACCAGAGGTGAGAGACAATCGACAA
GTATCGAACATGATGTTTCGAAGAAGCACAAAGAAAAGAAAGATGTGGTG
ACTAATGTGTTCTCGCGTGCGGGATGAATCCCCAGGATGAATCCATTCAC
CAGCCGCTCGCGAGCGCGGTTGTTGATTCCCCCAAGCTTGTACTACGATT
TTCGCGCAAACGTCACCGCTCACTGTTGCATCGTCTGAAACGTCCTCCCA
TTCGACTCGCTCGCAGGCCCGAAGCTAGCGGTGAGAGAGAGCAGGGGCGA
GTGTGCTCCATCAAGGAGTCGTTCGGCTTCGTTCGCTGCATGGACAGGCC
CGGCGATCTGTTTTTTCACCTCACCGAGGCCCCTCCCAACATTAACGTCG
GGGACGAGGTCGACTTCTTCATCGGGATGGGCAACAGGTAAGCCACTTTT
TATGCTGTGGTATTTGTTGATGCTGTGATTGTTGTCTTGTGCTGAGTAGC
TTGTTATGCGTCCTAGCAGGAATGAGTAGTGGTGAAGGTGTCGATGGCTG
TTGGTCGTGGTTTTTGCGACTCAGGGTGATCTTCACAAGAGGGCTTCGTG
CGGTGCTCTTTGTCTCCTGGAGATCACACACACTACCAATTACTGCTGCT
GTCCTCACCACGCCACGCCCAGGCTGTGCTCCTACCGCTGTTCTGTCGAC
GCTAGCTTGCTATACGTCTTGGGTAGGACTTGCAGGTGCTGATGGCTCTT
GGTGGTGGCGGTGGTTTTGCGACTTCGCTGATCTTTGACTCGTCGAGTCC
GTACGCGTTACTGTCCTTCACCACGCCACTATTTTGTACCCAGAGTGTGA
TCCAACAGTTATTCTGTCTGCCCGCCAGTGTTTCGAGATTTTCTACCTTG
CTCGGTGTGCCAACCGTTTCCTTCGTTTTCGCAGGAGCGGAAAGGACTGC
GCCCTGAAGCTCAACCTTCTTCCGCCGGGAACTGTGTCATCAGAAATAAT
CCTTGACGGTGAGAGGCCATGCTTAGTCTGTCGTTAGTGGATGTCTTCGG
TCTTCGGCGTTGCAGCAGTAGTGTCGGGAGGATGTTTCAGACACACGGAG
CACTCGGAGTGTTGTGGGATGTTTCAGAAACACATATTGAGCGCTCAAGG
TGCAGCTGTCGCGATATGCAAGTACTTCAATAGTTCCAATATGCTTGGAT
TTGTCCTCACAACGGACGGGTCACCATCACTCCATTATCGTAATATTCAA
TGGGCAGTCCATTTTATCTGAAGGTAGGGTGACACGACGGTGAGTGTTCG
ATTGCTCTTCCCTCAGTCTTGGTTCCGTGCACACTGATGTAGTAGATGGT
GTTAGCGGGTGCGTCACGATGGTGTACCTGTACGCGGGGGTGGTTTTAAA
TCCTGCCCTCCTGGGGAGCGTTCAAATTGCAACCTCGGTGGACGTCGGGC
ACAGCAACGACACACGAAAGACGTCAGTGCCCTCTTTTTGATTCCCTGTC
TGCTTATGTTGTTGTTTTTTATGTATTTCCTCGCATGTTTCTACTTCCAG
CCTCGTTTCTGGGAGTGATCGAGAGGGACATTCGCTCTTACCCTTCATCC
ATGCCGAGCACGCACCGAGCAAATATGATGGGGAGATCCAGACCGCAGGA
GCACCAGCAATCTGAGGGGCTCATCAAGGTGAGGGTAGATTACCTCAGGA
AAAAAAATGAGTTTTAGCCCTCAGTGGCACTAAGCTCCCGTGGCCTGCTT
GGCCCAAAACTTGCGAAAAATCAGGTGCGCTCCGACTCCATGTATCGGAG
AAGCCAGTCCCAGAGTGACAGAAATCAACCCCTTGCGTAAGGCGTATTGA
GCCTCTCTAGGATCGGTCTGGAACGACCAGTGGCCTACGCTTTTACATAC
CGCTGGTCCGATGTTTTCCAAGGCTGGGAGGTGTGACAAGTGAAACGATT
CCACGAAAAAGGTGCATGCGGTCTCGGCATGTTGCCCCAGTTTATTCCCA
ACACAAGTGGCGATATTAGCGAGGTTTCCATCTGTGAAGAGGACCAAAGA
CTGGGGTACAAGGGTGTAGCAGCGCGACAGCGGTGTACAACGACATGCTA
CAAAACAACCGGCTTTTTCTTGTCGCTTCCCTCACGGTGCCCCCTCTCCT
TGTAGATCACGGGCGCAGCCCCCCCCGAGGAGCCACCGGCCGCAGATGAC
ACCACGGCACTCCCGGAAGGGGAGGTACAGCCTGCCGACGCAACGGAGGG
AGGGGACCGTACCGACGTATCCCCTGAAACAGAAGCCGCCGTCGCAGGTG
GGTCAGAGGGGAGAAATGCGGTCAGATTCGTCGCCTTCGTGTTATTGCGT
CTGTGAGGGTGGAGGTGTACGTATGGACCTTGTTTCTGTGTGTATTTGTC
TATGATTACGTTGACGCTTGTGATTCTAGTCGCTGACGTTGCGGTGGGTG
TTTGATTCCTATCGAGCGTGATGGAGCACGCGGTTAGGAAGTAGACTTGG
GAGGGGTAAAGTTGCGGACATGCAATAGTTTTTGTCACGCGCACTGCCCG
CCCAGATGTTATCATGGCAGTACCTTTGTCGAGACGACTATGCCATGCTG
TGATCACGCCATGGAATTTTGAATTCGCAGTGCTAGAGTGTAGATGTGTC
GATACTGTGGTATCACGATTTCTGCTGGTGCTGCTGCTGGTGCTGCTGGT
GCTGGACGATTTTGTGACGCCGGTCGTTGTTTGTTCCCAGGTGTCGACGA
TGCCGCCGGCACCTCTGCTCCTGCCGCTTCTCCGGAAACGGAAGAGGCTG
TCGCCGTGCGATCGACACAACCGGCTCCGGCTGGCGATGACAAAGGTAAT
CATCGGTTCGCGGCACTGCGCTGTCTGTTGGGTCTTGGCTGCAATGGCCA
AGGCTTGCTGCGTCCAACACTTGATCAGAGAAGAAGGTATCGCAATTTCG
TGTTGTTTTGGAGCGCATGTTGGTTCCTGAGGTAGGCATGCACGCTCTTG
GTGTTGTCGTGTGGCATGACAGACGGAGCTGTTGGTACATGTTGTCTCCC
TACCATGTTTTGCTCTTCCCATCGTTGACCTCCAACGCAGGGTTGTAGCT
TCTCTCGGACGTCAAGGACAGTGATGACGGACACACGTCATCATCACGAT
ACTGTGAACAGTTGTCTTGTGACGTATGCTCAGTTGAGATCGTGAGAGAC
AGGAATTTTTTACGACATAGCAAGATTACATCGTTGCCGTAATCTGCCGC
CTTGGCTGATTCAGGCGACAGGGCGGCCCCGCTTGGGCTCCAGGGCGCGA
TGGTGACCTACCTCGTCACGGACGGTTTGGAAGAAGACGCCGGCTCCAGG
TTTAGACGTGGAGACGAGGTCCGCTTCAAGGTAAATAAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8671:6..6394-

>mRNA_Ecto-sp13_S_contig8671.20121.1 ID=mRNA_Ecto-sp13_S_contig8671.20121.1|Name=mRNA_Ecto-sp13_S_contig8671.20121.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1485bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8671:6..6394- (Ectocarpus species13 EcNAP12_S_4_19m)
CGCCTCGCATCGGTACTGAAAGAGACGCAGCAGGGTCGTGATTGCGGCGT
TTACCCTCCGAGACAAGGGGAGGAGGCGTGCAGCCAAGCGCAGGATCGCC
AATCCACAGCAGAAGTAGGACAGCACAACAGCAGCGACATCCCTGTAGTA
GTCATGGATAGACGTAACAACGGAGGCGGTGGGGATTATGCTTATGGTGA
TGGCGGAGGAGCAAGGGCGGGCGGTAATCGCTATGATCGCCAGCACGGCC
AGCAGAGCGACGCAGGCGGAGGTGGAGGTCGATGGCAGAACGACATGTAC
GACAACACTTCCCAACAGCCGCGCCGGGGAAGCCACGGTGGAGGTGGAGG
TGGAGGTGGCTATCGGGAAAGAGGCGGTTACCAGCACGACCAGCGCGACC
ACAGGGGCGACGGGGGGGGAAGGGGGCGGAGCTACGGCGGTGGAGGGGGT
GATCGCTATGGCGGAGGCGGTGGGAGGCGGGACAATGCCCGTGGTGGTGG
CGGCGGTTTCAGGGACAACCAGAACGACAACTCCTTCGCCGGTCAGTCGG
TACAACAACAAAACTGGCCTACCCCAGGCGCAGCCGCCGGGGATGCTAGG
GAGGGGGGAGAGGGGGGCGGGGGCGTTGGCGGAGGCGGTGAACGCTGGCA
GAAGCACGCGCAGGCGCTAAGTGGGAGGAGCGGCGGCGGTGGTGGTGGTG
GCTACAACGCGCAGCAGCGTCACGGGCAACAAAACCAGAGGCCCGAAGCT
AGCGGTGAGAGAGAGCAGGGGCGAGTGTGCTCCATCAAGGAGTCGTTCGG
CTTCGTTCGCTGCATGGACAGGCCCGGCGATCTGTTTTTTCACCTCACCG
AGGCCCCTCCCAACATTAACGTCGGGGACGAGGTCGACTTCTTCATCGGG
ATGGGCAACAGGAGCGGAAAGGACTGCGCCCTGAAGCTCAACCTTCTTCC
GCCGGGAACTGTGTCATCAGAAATAATCCTTGACGCCTCGTTTCTGGGAG
TGATCGAGAGGGACATTCGCTCTTACCCTTCATCCATGCCGAGCACGCAC
CGAGCAAATATGATGGGGAGATCCAGACCGCAGGAGCACCAGCAATCTGA
GGGGCTCATCAAGATCACGGGCGCAGCCCCCCCCGAGGAGCCACCGGCCG
CAGATGACACCACGGCACTCCCGGAAGGGGAGGTACAGCCTGCCGACGCA
ACGGAGGGAGGGGACCGTACCGACGTATCCCCTGAAACAGAAGCCGCCGT
CGCAGGTGTCGACGATGCCGCCGGCACCTCTGCTCCTGCCGCTTCTCCGG
AAACGGAAGAGGCTGTCGCCGTGCGATCGACACAACCGGCTCCGGCTGGC
GATGACAAAGGCGACAGGGCGGCCCCGCTTGGGCTCCAGGGCGCGATGGT
GACCTACCTCGTCACGGACGGTTTGGAAGAAGACGCCGGCTCCAGGTTTA
GACGTGGAGACGAGGTCCGCTTCAAGGTAAATAAA
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