prot_Ecto-sp13_S_contig8671.20121.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8671.20121.1
Unique Nameprot_Ecto-sp13_S_contig8671.20121.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length495
Homology
BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: D7FPP6_ECTSI (CSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP6_ECTSI)

HSP 1 Score: 462 bits (1189), Expect = 2.080e-149
Identity = 265/290 (91.38%), Postives = 267/290 (92.07%), Query Frame = 0
Query:  214 ERWQKHAQALSGXXXXXXXXXYNAQQRHGQQNQRPEASGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKITGAAPPEEPPAADDTTALPEGEVQPADATEGGDRTDV---------SPETEAAVAGVDDAAGTSAXXXXXXXXXXXAVRSTQPAPAGDDKGDRAAPLGLQGAMVTYLVTDGLEEDAGSRFRRGDEVRFKVN 494
            ERWQKHAQALSG  XXXXXX YNAQQRHGQQNQRPEASGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQE+QQSEGLIKITGAAPPEEP AADDTTA PEGEVQPADATEGGD T           SPETEAAVAGVDDAAGTSA  XXXXXXXX AVRSTQP  AGDDKGD AAPLGLQGAMVTYLVTDGLEEDAGSRFRRGDEVRFKV+
Sbjct:  120 ERWQKHAQALSGRSXXXXXX-YNAQQRHGQQNQRPEASGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEYQQSEGLIKITGAAPPEEP-AADDTTAPPEGEVQPADATEGGDGTXXXXXXXXXXXSPETEAAVAGVDDAAGTSAPAXXXXXXXXVAVRSTQPTLAGDDKGDTAAPLGLQGAMVTYLVTDGLEEDAGSRFRRGDEVRFKVS 407          
BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: A0A6H5L4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q3_9PHAE)

HSP 1 Score: 466 bits (1198), Expect = 2.620e-146
Identity = 254/281 (90.39%), Postives = 257/281 (91.46%), Query Frame = 0
Query:  214 ERWQKHAQALSGXXXXXXXXXYNAQQRHGQQNQRPEASGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKITGAAPPEEPPAADDTTALPEGEVQPADATEGGDRTDVSPETEAAVAGVDDAAGTSAXXXXXXXXXXXAVRSTQPAPAGDDKGDRAAPLGLQGAMVTYLVTDGLEEDAGSRFRRGDEVRFKVN 494
            ERWQKHAQALSG XXXXXXXX  AQQRHGQQNQRPEA GEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRS+PSSMPSTHRANMMGRSRPQE QQSEGLIKITGAAPPE+PPAA DTTA PE EVQPADATEGGD TD S ETEAAVAGVDDAAGTSA           AVRSTQPAPAGD KGDRAAPLGLQGAMVTYLVTD LEEDAGSRFRRGDEVRFKV+
Sbjct:  118 ERWQKHAQALSGRXXXXXXXXXXAQQRHGQQNQRPEAGGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSHPSSMPSTHRANMMGRSRPQESQQSEGLIKITGAAPPEDPPAASDTTAPPEREVQPADATEGGDGTDTSFETEAAVAGVDDAAGTSAPAATPETEEAVAVRSTQPAPAGDGKGDRAAPLGLQGAMVTYLVTDSLEEDAGSRFRRGDEVRFKVS 398          
BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: A0A7S2SQY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY9_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.320e-20
Identity = 46/88 (52.27%), Postives = 67/88 (76.14%), Query Frame = 0
Query:  254 REQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRS 341
            RE G+V S+KE FGF+RC+ RPGDLFFH++EAP +I VGDEV+F +   +R G+ CA  ++ LP GTV  E +L+ S++G+++R IR+
Sbjct:   26 RECGKVKSLKEKFGFIRCVGRPGDLFFHISEAPRDIEVGDEVEFAVDT-SRDGRLCAKAIDTLPRGTVQFEDVLETSYVGIVDRGIRN 112          
BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: K3WP78_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP78_GLOUD)

HSP 1 Score: 99.8 bits (247), Expect = 2.550e-18
Identity = 55/121 (45.45%), Postives = 74/121 (61.16%), Query Frame = 0
Query:  255 EQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKITGA 375
            E+G V SIKESFGFV C+DR GDLFFH+TEAP ++ + DEV+F I    RS KD A +L  LP GT+  E I +  F G++ R +RS  S     + A        Q+ +++ GLI+I  A
Sbjct:  174 EKGIVVSIKESFGFVSCVDREGDLFFHITEAPVDVQLQDEVEFRIKYNQRSAKDIACQLVTLPKGTIVLEDISEEFFEGIVTRGVRSSSSYSSXXYDARQQ-----QQREETHGLIEIAKA 289          
BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: A0A5D6XH35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH35_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 7.280e-17
Identity = 49/104 (47.12%), Postives = 66/104 (63.46%), Query Frame = 0
Query:  254 REQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPS------SMPSTHR 351
            +EQG V +IKESFGFV CMDR GDLFFH+TEAP ++ + DEV+F +    RS ++ A +L  LP G++  E + D    GV+ R +RS P+      S P T R
Sbjct:  148 KEQGVVIAIKESFGFVSCMDRDGDLFFHITEAPVDVQLHDEVEFRVKFNQRSSREMACQLVALPKGSIVQEDVADEFLDGVVTRALRSAPNYHNASDSRPQTQR 251          
BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: A0A484E9J3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E9J3_BRELC)

HSP 1 Score: 90.9 bits (224), Expect = 1.720e-15
Identity = 52/118 (44.07%), Postives = 71/118 (60.17%), Query Frame = 0
Query:  255 EQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKI 372
            EQG V SIKESFGFV  ++R GDLFFH++EAP  I V DEV+F I    RS K+ A +L  LP GT+  E I D  +LG++ + +   P    S   +N   R + +  ++  GLI+I
Sbjct:  150 EQGFVVSIKESFGFVSSLERDGDLFFHISEAPVEIQVHDEVEFQIKYNQRSDKEMACQLVALPKGTIQVEEISDDFYLGIVTKSLSLGPHQGGSRGYSN--NRDQDRRLREEHGLIEI 265          
BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: G4Z9V3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z9V3_PHYSP)

HSP 1 Score: 90.1 bits (222), Expect = 3.080e-15
Identity = 56/143 (39.16%), Postives = 79/143 (55.24%), Query Frame = 0
Query:  251 SGERE----QGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKITGAAPPEEPPAADDTTA 389
            SG RE    QG V SIKE+FGFV C++R GDLFFH++EAP ++ + DEV+F +    RS K+ A +L  LP GT+  E + D  F GV+ +   S P       R     R   +  ++  GLI++  A    E   A++T A
Sbjct:  158 SGARELPVKQGFVVSIKENFGFVSCLERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIKVEEVSDELFDGVVTK---SLPRGGHGGGRGFFNNRDDDRHQREEHGLIEVKKAPEQGEDAKAEETAA 297          
BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: M4C6A3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C6A3_HYAAE)

HSP 1 Score: 89.0 bits (219), Expect = 6.430e-15
Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = 0
Query:  259 VCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSE--GLIKI 372
            + SIKE+FGFV C+DR GDLFFH++EAP +I + DEV+F +    RS KD A +L  LP GT+  E+I D    G++ +       S+P   R N  G      H   E  GLI+I
Sbjct:    1 MVSIKETFGFVSCLDREGDLFFHISEAPVDIQLHDEVEFRVKYNQRSDKDVACQLVALPKGTIKVEVINDEVIDGIVTK-------SLPRGGRGNGRGSFNGDRHHNREEHGLIEI 109          
BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: A0A6A4EEB2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EEB2_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.190e-15
Identity = 51/133 (38.35%), Postives = 76/133 (57.14%), Query Frame = 0
Query:  255 EQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKITGAAPPEEPPAADDT 387
            +QG V SI+E+FGFV C++R GDLFFH++EAP  + + DEV+F + +  RS K+ A +L  LP GT+  E + D    GV+ +   S P    +  R    GR   +  ++  GLI++   A  E   AA+ T
Sbjct:  178 QQGFVVSIRENFGFVSCLERDGDLFFHMSEAPVGVQLQDEVEFRVKLNQRSDKEMACQLVALPKGTIQVEELSDELVDGVVTK---SLPRGGHAGGRGFFNGRDDDRHQREEHGLIEVKREAETEVEAAAEQT 307          
BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Match: A0A662X4D1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4D1_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 9.920e-15
Identity = 56/134 (41.79%), Postives = 79/134 (58.96%), Query Frame = 0
Query:  255 EQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDI-RSYPSSMPSTHRANMMGRSRPQEHQQSEGLIKITGAAPPEEPPAADDT 387
            E+G V SIKE+FGFV CM+R GDLFFH+TEAP ++ + DEV+F +    RS K+ A +L  LP GT+  E + +  F GV+ + + R   +S  S +R +     R + H    GLI+   A  PEE    DD+
Sbjct:  293 ERGFVVSIKENFGFVSCMEREGDLFFHITEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVGLPKGTIVVEDVSEEFFDGVVTKSLPRGGNNSYNSYNRDDTRHSQRDEPH----GLIE---AVTPEENEGQDDS 419          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8671.20121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPP6_ECTSI2.080e-14991.38CSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L4Q3_9PHAE2.620e-14690.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SQY9_9STRA1.320e-2052.27Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
K3WP78_GLOUD2.550e-1845.45Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XH35_9STRA7.280e-1747.12Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A484E9J3_BRELC1.720e-1544.07Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
G4Z9V3_PHYSP3.080e-1539.16Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
M4C6A3_HYAAE6.430e-1543.10Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A6A4EEB2_9STRA7.190e-1538.35Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A662X4D1_9STRA9.920e-1541.79Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002059Cold-shock protein, DNA-bindingPFAMPF00313CSDcoord: 256..304
e-value: 6.3E-5
score: 22.7
NoneNo IPR availableGENE3D2.40.50.140coord: 254..321
e-value: 1.1E-17
score: 65.8
NoneNo IPR availablePANTHERPTHR12913UNR PROTEIN N-RAS UPSTREAM GENE PROTEINcoord: 250..344
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 252..320

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8671contigEcto-sp13_S_contig8671:6..6394 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8671.20121.1mRNA_Ecto-sp13_S_contig8671.20121.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8671 6..6394 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8671.20121.1 ID=prot_Ecto-sp13_S_contig8671.20121.1|Name=mRNA_Ecto-sp13_S_contig8671.20121.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=495bp
RLASVLKETQQGRDCGVYPPRQGEEACSQAQDRQSTAEVGQHNSSDIPVV
VMDRRNNGGGGDYAYGDGGGARAGGNRYDRQHGQQSDAGGGGGRWQNDMY
DNTSQQPRRGSHGGGGGGGGYRERGGYQHDQRDHRGDGGGRGRSYGGGGG
DRYGGGGGRRDNARGGGGGFRDNQNDNSFAGQSVQQQNWPTPGAAAGDAR
EGGEGGGGVGGGGERWQKHAQALSGRSGGGGGGGYNAQQRHGQQNQRPEA
SGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIG
MGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTH
RANMMGRSRPQEHQQSEGLIKITGAAPPEEPPAADDTTALPEGEVQPADA
TEGGDRTDVSPETEAAVAGVDDAAGTSAPAASPETEEAVAVRSTQPAPAG
DDKGDRAAPLGLQGAMVTYLVTDGLEEDAGSRFRRGDEVRFKVNK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002059CSP_DNA-bd
IPR012340NA-bd_OB-fold