mRNA_Ecto-sp13_S_contig8668.20114.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8668.20114.1
Unique NamemRNA_Ecto-sp13_S_contig8668.20114.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: A0A6H5JPA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA3_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 1.050e-94
Identity = 153/242 (63.22%), Postives = 180/242 (74.38%), Query Frame = 1
Query:    7 RARTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEGEATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEIALPLGFSSFLKAVKA 732
            R R LHKRLL MHFIA+ N SAGC KYM   S++SCLAT+RAM AT +LYDASLVLFL+ KTSVTNG R L +WE CI+WWSRFY W  L   ALF+      V S EGTFCL     E E  T SDT+GFV NN +LIIQF LLLAMFVKP+MI  G TQSGGA+YRRLV+RN+ CT+A+   YA+TT +VVL  L  +PGS +A  +AD+ P  NI +TLCLTEI+LPLGFSS +KA+KA
Sbjct:   63 RVRALHKRLLAMHFIAIANMSAGCAKYMPDVSELSCLATRRAMVATILLYDASLVLFLVGKTSVTNGNRALAIWEACITWWSRFYGWVVLTTGALFLAAQASSVPSLEGTFCLTLDLKEDEDVTFSDTLGFVINNGILIIQFALLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEISLPLGFSSCVKAIKA 304          
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: A0A6H5JPA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA0_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 3.000e-75
Identity = 128/235 (54.47%), Postives = 159/235 (67.66%), Query Frame = 1
Query:   13 RTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDAS----------LVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEGEATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEI 687
            RTLH+RLL MH +A VN  AG  KYMLP SD SC  + RA  A+ + YD S          LVLFLLAKTSVTNG RTLT WE  I+WWSRF+AW YLP     +  S PG  + EGT C      E E   V D  GF  NN +L +Q+VLLLAMF+KPM++S+G TQSGGA+YRR+V+RNIVCT+ +  AY ITT VVVL++L + P +++A  + D+ P INI +TLCLTE+
Sbjct:    9 RTLHRRLLAMHVVASVNMGAGAAKYMLPPSDTSCRVSHRAWIASLLFYDVSAPQAVADGACLVLFLLAKTSVTNGNRTLTSWENGITWWSRFWAWIYLPVSGTVLGLSFPGEVNSEGTACFNSYGEETETREVGDVAGFAGNNVLLTVQYVLLLAMFIKPMLVSHGNTQSGGAVYRRVVIRNIVCTIGIACAYVITTVVVVLALLSSRPDTDKAAAVGDIVPSINICVTLCLTEV 243          
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: D8LN54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN54_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 1.360e-68
Identity = 113/187 (60.43%), Postives = 135/187 (72.19%), Query Frame = 1
Query:   13 RTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEGEATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITT 573
            RTLH+RLL MH IA VN SAG  KYMLP SD SC  + RA  A+ + YDA LVLFLLAKT VTNG RTLT WEK I+WWSRF+AW YLP  A F+  + PG  + EGT C    R E +   V D  GF +NN +L +Q+VLLLAMF+KPM++S G TQSGGA+YRR+V+RNIVCT+ +  AY ITT
Sbjct:    9 RTLHRRLLAMHVIASVNMSAGAAKYMLPLSDTSCRVSHRAWIASLLFYDACLVLFLLAKTGVTNGNRTLTCWEKGITWWSRFWAWIYLPVSATFLGLTFPGEVNSEGTACFNSYREETDTAEVGDVAGFASNNVLLTVQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTIGIACAYVITT 195          
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: A0A6H5K249_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K249_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.970e-68
Identity = 114/195 (58.46%), Postives = 138/195 (70.77%), Query Frame = 1
Query:  148 VLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEGEATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEIALPLGFSSFLKAVKA 732
            V   ASLVLFL+ K SVTNG R L +WE CI+WWSRFY W  L   A F+      V S EGTFCL     E E  T SD +GFV NN +LIIQF LLLA+FVKP+MI  G TQSGGA+YRRLV+RN+ CT+A+   YA+TT +VVL  L  +PGS +A  +AD+ P  NI +TLCLTE++LPLGFSS +KA+KA
Sbjct:    9 VRQQASLVLFLVGKASVTNGNRALAIWEACITWWSRFYGWVVLTTGAFFLAAQASSVPSLEGTFCLTLDLQEDEDVTFSDALGFVINNGILIIQFALLLAIFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTELSLPLGFSSCVKAIKA 203          
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: A0A6H5JY97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY97_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 4.700e-62
Identity = 122/264 (46.21%), Postives = 167/264 (63.26%), Query Frame = 1
Query:   13 RTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEG---TFCLAGSRAEGEATTVSDT-MGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEIALPLGFSSFLKAVK-------AGRNEGAASSRTVM 771
            R LH  LL+ HF++V+   A  FKY LP ++ +C AT + + +  +LYDASL+ FLLAK  VTNG R L  WE  I W SR YAW YLP VA+ I     G  ++E    TFC+ G   + +   V+D  +G+ +N   L+IQFVLLL +FV+P+++   G+QSG A+YR +V++NI CT+A+V AYA+TT VV+ +++  S  SN A L AD+ P +N  +TLCLTEIALPLGFSS  KA         +  NEG +   T M
Sbjct:   82 RFLHITLLVTHFVSVITGVAAVFKYTLPVTEANCTATHKVLVSMILLYDASLLTFLLAKVHVTNGHRKLAWWETVIVWISRGYAWIYLPIVAVVIPYQFRGGTNDEASVKTFCVNGYHMDDDTDEVNDNVLGYGSNMGSLVIQFVLLLILFVRPLLVRLEGSQSGEAMYRMVVIKNITCTIAVVTAYAVTTVVVIAALIRQSNDSNTASLFADITPLVNQFVTLCLTEIALPLGFSSCWKACSLELCSWSSSPNEGPSDLETAM 345          
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: D8LG96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG96_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 3.530e-48
Identity = 106/238 (44.54%), Postives = 144/238 (60.50%), Query Frame = 1
Query:   13 RTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEGEATTVSDTM-GFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEIALPLGFSSFLKA 723
            R LH  LL+ H ++V+   A  FKY LP +  +C AT + + +  +LYDASL+ FLLAK  VTNG R L  WE  I W SR YAW YLP VA+ I     G  ++E TFC+ G   + +A  V + + G+ +N   LIIQFVLLL +FV+P+++   G+QSG AIYRR+V++NI CT+A+V AYA+TT VV+ ++L  +  SN                      IALPLGF+S  KA
Sbjct:   82 RFLHITLLVTHVVSVMAVVAALFKYTLPVTVENCTATHKVLVSMLLLYDASLLTFLLAKVHVTNGHRKLAWWETAIVWISRGYAWIYLPIVAVAIPYQFRGGTNDERTFCINGYNMDDDADEVHENIRGYGSNMGSLIIQFVLLLILFVRPLLVRLEGSQSGEAIYRRVVIKNITCTIAVVTAYAVTTVVVIAALLRQNNDSNT---------------------IALPLGFTSCWKA 298          
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: D7G2C9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C9_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 2.010e-46
Identity = 88/175 (50.29%), Postives = 115/175 (65.71%), Query Frame = 1
Query:  217 LTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEG--EATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEIALPLGFSSFLKAVKAG 735
            L  WEK I WWSR Y W YLP +AL + T  PG     GTFC  G    G  E TT ++   F  NN +L++QF+LLL +FV+PM++   G QSGGA+YRR+V+RN+ CT  +V++YAITT VVV+++L  S  SN++  I D+A   N + TLCLTEI LPLGF S +KA   G
Sbjct:    2 LAWWEKAIRWWSRLYGWVYLPLMALMLGTRFPGGTDPAGTFCYNGIVPTGASELTTSNNAQSFGINNVLLVVQFILLLGLFVQPMLVRVEGAQSGGAVYRRVVLRNVFCTAGIVISYAITTLVVVIALLRESVESNKSAQIRDVALAANSLGTLCLTEITLPLGFRSCMKACSTG 176          
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: D8LG97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG97_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 2.310e-45
Identity = 89/208 (42.79%), Postives = 131/208 (62.98%), Query Frame = 1
Query:    7 RARTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEG----EATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSN 618
            + R LH  LL+ H +A++  ++   KY LP +  +C AT +   A  +L+DASL+ FLL K  VTNG R L+ WEK + W  R +AW YLP  ++F+  + PG  +EEGTFC  G + +     E     +  G+   N+ML++Q+VLLL +FV+P+M+   G QSGGA+YR +V+RNI CTVA+V++Y ITT V V+++L   P   
Sbjct:   96 KVRFLHIALLLEHIVALIAIASTVLKYALPVTASNCNATHKVSTAFAILFDASLLTFLLFKVDVTNGIRKLSCWEKGVIWICRAFAWIYLPLASIFVSATYPGGTNEEGTFCENGFKRDEDVNYEREASDNAYGYAVTNAMLLVQYVLLLILFVRPLMVRLEGAQSGGAVYRSVVIRNISCTVAVVVSYIITTIVTVIALLRQHPNDT 303          
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: D8LN45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN45_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 2.960e-45
Identity = 86/148 (58.11%), Postives = 109/148 (73.65%), Query Frame = 1
Query:  292 FILTS-LPGVASEEGTFCLAGSRAEGEATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEIALPLGFSSFLKAVKA 732
            FIL S +  V S EG FCLA    E E  T SDT+GFV NN +L+IQFVLLLAMFVKP+MI  G  QSGGA+YRRLV+RN+ CT+ +   YA+TT +VVL  L  +PGS +A  +AD+ P  NI +TLC+TE++LPLGFSS +K++KA
Sbjct:   26 FILASQVSSVPSPEGNFCLALDLQENEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHIQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCVTEMSLPLGFSSCVKSIKA 173          
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: A0A6H5JQ65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ65_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.170e-42
Identity = 86/207 (41.55%), Postives = 129/207 (62.32%), Query Frame = 1
Query:   10 ARTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAG-SRAEG---EATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSN 618
            +R+LH  L++ H +A++  ++   KY LP +  +C AT +   A  +L+DASL+ FLL K  VTNG R L+ WEK + W  R +AW YLP  ++F+  + PG    +GTFC    +R E    E     +  G+   N+ML++Q+VLLL +FV+P+M+   G QSGGA+YR +VVRN+ CT A+V++Y ITT V V+++L   P   
Sbjct:   51 SRSLHVALVVEHIVALIAIASTVLKYALPVTASNCNATHKISTAFAILFDASLLTFLLFKVDVTNGMRKLSCWEKGVIWICRAFAWIYLPLASIFVSATYPGANIYQGTFCENSFNRDEDVNYEREASDNAFGYAVTNAMLLVQYVLLLILFVRPLMVRLEGVQSGGAVYRSVVVRNVSCTAAVVVSYIITTIVTVIALLRQHPNDT 257          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JPA3_9PHAE1.050e-9463.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPA0_9PHAE3.000e-7554.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN54_ECTSI1.360e-6860.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K249_9PHAE1.970e-6858.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY97_9PHAE4.700e-6246.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG96_ECTSI3.530e-4844.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2C9_ECTSI2.010e-4650.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LG97_ECTSI2.310e-4542.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LN45_ECTSI2.960e-4558.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQ65_9PHAE1.170e-4241.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8668contigEcto-sp13_S_contig8668:1662..5473 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size870
Hectar predicted targeting categorysignal peptide
Exons7
Cds size870
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8668.20114.1prot_Ecto-sp13_S_contig8668.20114.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8668 1662..5473 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464138.8635817-CDS-Ecto-sp13_S_contig8668:1661..18201681464138.8635817-CDS-Ecto-sp13_S_contig8668:1661..1820Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8668 1662..1820 +
1681464138.877196-CDS-Ecto-sp13_S_contig8668:2001..21171681464138.877196-CDS-Ecto-sp13_S_contig8668:2001..2117Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8668 2002..2117 +
1681464138.8915462-CDS-Ecto-sp13_S_contig8668:2374..24291681464138.8915462-CDS-Ecto-sp13_S_contig8668:2374..2429Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8668 2375..2429 +
1681464138.9075234-CDS-Ecto-sp13_S_contig8668:2573..26721681464138.9075234-CDS-Ecto-sp13_S_contig8668:2573..2672Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8668 2574..2672 +
1681464138.9184566-CDS-Ecto-sp13_S_contig8668:3086..32781681464138.9184566-CDS-Ecto-sp13_S_contig8668:3086..3278Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8668 3087..3278 +
1681464138.9286594-CDS-Ecto-sp13_S_contig8668:4463..45261681464138.9286594-CDS-Ecto-sp13_S_contig8668:4463..4526Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8668 4464..4526 +
1681464138.9423556-CDS-Ecto-sp13_S_contig8668:5287..54731681464138.9423556-CDS-Ecto-sp13_S_contig8668:5287..5473Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8668 5288..5473 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8668.20114.1

>prot_Ecto-sp13_S_contig8668.20114.1 ID=prot_Ecto-sp13_S_contig8668.20114.1|Name=mRNA_Ecto-sp13_S_contig8668.20114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=290bp
MRRARTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTV
LYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFIL
TSLPGVASEEGTFCLAGSRAEGEATTVSDTMGFVTNNSMLIIQFVLLLAM
FVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLG
ASPGSNQADLIADMAPPINIVMTLCLTEIALPLGFSSFLKAVKAGRNEGA
ASSRTVMVPATMKRVPCLRTSASATKKSGGSVVVPTEVA*
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mRNA from alignment at Ecto-sp13_S_contig8668:1662..5473+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8668.20114.1 ID=mRNA_Ecto-sp13_S_contig8668.20114.1|Name=mRNA_Ecto-sp13_S_contig8668.20114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3812bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8668:1662..5473+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCCGTGCTAGAACCCTTCACAAGAGGCTTCTGATGATGCACTTCAT CGCCGTTGTGAACGCGAGTGCCGGATGCTTCAAGTACATGCTCCCCGCTT CGGATGTGTCGTGCCTGGCTACTCAACGAGCGATGGCAGCTACAACGGTT CTCTACGATGTAAGCGGAAGACACATTTGTAGGAATGGTGACCTTATTTG TTCGTGGCACTCCGTCTAGGTATCTTTAGGCCACAAGATGTTTCAAATAA ATAGCGCCAGTACAGGTTGAAAGCCAAACGCCGTGTGCAACAACATGAAC CGGATGGTCCTGCGCCAAAAATGGTTGTGTTCGACATCAGGCGAGCCTGG TGTTGTTTCTCCTTGCGAAAACAAGTGTCACCAATGGAGGCAGGACCCTG ACTGTATGGGAAAAATGCATCTCGTGGTGGTCGCGCTTCTACGCCTGGGG ATATCTGTGAGTGTGTGTCGTACGGAGTAGCATTTCTGATGCTGGAACAG TGGTTGGCTGGAAGACAACGCCGTAGCGCGCAGAGATGCAACTACGGTAC CGGAATCGTTTTCTGTGCCACGGCTTCTCCGCGAAAGGTTTGAGCACCGC CGAACTTGTGCATGCTGCGGCGATTTATTCAATCATTGAACCACCAGATT CTGACCATCGGGAACACACCGCAAGGAGACTGCCTCTCTTCCTCCGATTA TTTTTTGGCGCAGGCCGTTCGTTGCCCTCTTCATACTTACCAGTCTTCCT GGGGTGGCAAGTGAAGAGGTGAGAATCTAGAGGTAGCACGCTTTTTCGAC AAATTATGTCCAATCGGCGACACTACAACCACAGCATCCGCTTTGTTCAG ATCTGGCCACGAGACACTTGTCCATCTCCAAGACGGATGCGCCCCCAACG GATGTTATGCAGGGGACGTTTTGCTTAGCTGGATCTCGAGCTGAGGGTGA GGCCACGACGGTTTCAGATACGATGGGATTCGTGACCAACAACAGTATGC TGATCATCCAGGTGGGCTGATGTATCACACAGGTTGCGAAACCTTGGAGT AACAAGGGCCCAAGCAGGGCCTCTCTGTTTGGGATGTTTGTCTGGGAACG ATCAGTGTACTCTTAAGGATGCACCACCCACTGAGTGGAGCGAAGAAGGG TTGGGTGGAGGCGGCGACGATGGCTGAGTGTGGGGAAGGGGGGAGTATCC TCAGGATTGGTTTCCCTCATCTCTCTCAAGTGGGCACCTGCCCAGAGACG CGCGCAGCGTTCGCCCGATCATCTAGCGGAAATCTGTTCTTGAGTGAATG ATCAAGGCCTTGGTGACGTGGTTGATCCTATTCTCCGCGGCAACTCCAAC CAGAGGTGCTTATCGTCAACGACTCAGTTTGTCTATAGTGTCCTCCCCGT GTGCCTGTCGTACGTTTCCTTTCAGTTTGTGCTTCTGCTGGCGATGTTCG TGAAGCCTATGATGATATCCAACGGCGGCACTCAATCGGGGGGGGCGATT TACCGCCGACTGGTTGTCCGAAACATTGTTTGCACTGTCGCTTTGGTCTT GGCATACGCCATCACAACTGCCGTTGTCGTCCTGAGCGTGCTCGGAGCTT CCCCCGGGAGCAACCAGGTGCGGAATGGCGACGTAGTCAAAAATAGGCGT GGTCCTTCGCGGATGCGGCGCTATCTGTGGTTGACTGGTTGGCTAGGGCG TACAACGTTTCACGGTTACTCAGTCCTGCATTAGAGAAGATTGTTGTCAG CATGCCCTTTTTCGTCCCATCTCGCAATTGATCCCGGCCTACGTTTGGGA AAAAGGCCACAAATCACTAGTACAGCATCGGGACAAAAACAAGAGCAGGG AAAACGCTGCAGTTACCAACAGGCACACAGCTACCATAGCAGATATTTTG CTTACCTCAGCTCCTCTATGGCTGAAATGGTTGGTTGCAGTTCTTCGAGC GAGACCCGCTGCAGTAGATGACGAATTGTTGGACAAGTATTTAGCCTTTC GTCCTGCCGTGTGTCGCCCGAGACTCTAGTACAAGCGTCTGAGATTCGTG AACGCGCACGTACAAAGCTTTGGAAACCGCTTCATGGTGAACATCATTTG GGTTTTCAAAGAGGAAATAAAGGCAACGGTACGAATGGGTGAATGGTTGA AACACTCACGCTGGGCAGTTGTGGGTTTGGCCCGACACCAGAATATGTGC AATTGCTATCCCAAGTCATGCGTGTCGGGAAGAACATTTTGCGCGTATTG TCAAGGCTAGTTGCAGGCAGACACGGTCGTCGCCGGCCTCTTCGTGGCAC CCTGAACCAAGCAGCAAGTGTACCTTGTACTATTTACCTCAGTCGGGAAT CAGTCGGAGCGGCATCTTCCCATGCCTGGCCGTACCCCATGGCCTTTGAC GGTGCCTTACGTGTCTAAGCATGTACGCTCGCGAGTTCGTCGTTCCATGT GCGACAGAGAGGGAAATAGAAATAATGTGAGGTAGTTGTCTGTTGGGAGG GACTTATGTACTGGGAGAAGCACCGCCCGAGCGCAGGTGTAAGCTCAGGG TAAGTAAATCGCTCAGATGAAGTTGGTTGGAAAGACCGAGAAGGCCATGG CCGCCACATGACGACGTCACAGCAAATACCCCAAACGTGTGACAAGCGCA CCCATCAGACTCTGTAGTTCTCTGCCATTGCGTTTGATGGGAGCGACAAT GCGCACGAGGTGCTTTCCGAGGTGGGCGAAACGATGAACGCAACCCGTGT CCCACAACTGTTACCTGATCTGAGCCGTGCTTGACGGCGCCCCTCTTTGC AGGCGGATCTTATCGCGGACATGGCGCCTCCGATCAACATTGTCATGACG CTCTGCCTGACTGAGGTGGGCAGACAGAAGAGGGGTGTGTCCTTAGCACG AAGTATCCAGTATTCCACGGAGTAAACACGCGTGGATACACCGTACCGTG CACAACTATTGTAGAAAGCAGGGCTGAGAAAGCACTTTGATAGAGTAGAC AGTTTCGCACCCGTCCCTGTATTTCGTATTGAGCTTGCAGATATGGCAAA GCCTCTGCTATGCACACGGGTCTGACTTAAAATCACTCAAATGCGAAAGA AAACTTTTCAGATCCCCACAAGTAAAGGAACGTTCGCGTCGGAGAGCGCC TCCTTTTGAAATGCTTTTTCAACAGTTTTTTCCACGAGCGCTGGTTGAGT ACAGCCAGCACCAAGGCCTCCAACCGCCCATGTGATCACTGTAGTTCGTA GCCGTGCTTCTCATTGTACCCGTTGCAGCAAATATGTTGCATCTCTCAAA CGCGTCGAATGGTGCCACAGTACGCCGATGGGGACATGAATTATTTGTCA TCGGGGGCTCAGCTGGTGCTAAAGTAGTCCAACCTCGACCTGGCAAGCCC GTTGCAGCAAATATGTTGCATCTCTCAAACGCGTCGAATGGTGCCACAGT ACGCCGATGGGGACATGAATTATTTGTCATCGGGGGCTCAGCTGGTGCTA AAGTAGTCCAACCTCGACCTGGCAAGCATATGTTTCGGGGCATTTCAAGG CCCCTCAAAACCTGTGATGTACAAATGGTATTTCAGATGTGCATGTGGGC TCCGCGTTATTTCTCTTTTGAAACAGATAGCCTTACCTCTCGGGTTCTCC AGCTTTTTGAAGGCTGTCAAGGCTGGAAGGAACGAGGGAGCCGCCTCATC ACGGACGGTGATGGTCCCCGCAACAATGAAGCGGGTACCATGTCTGCGAA CTAGCGCCAGCGCCACGAAGAAGTCGGGAGGGTCTGTTGTTGTTCCCACC GAAGTGGCGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8668:1662..5473+

>mRNA_Ecto-sp13_S_contig8668.20114.1 ID=mRNA_Ecto-sp13_S_contig8668.20114.1|Name=mRNA_Ecto-sp13_S_contig8668.20114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=870bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8668:1662..5473+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCCGTGCTAGAACCCTTCACAAGAGGCTTCTGATGATGCACTTCAT
CGCCGTTGTGAACGCGAGTGCCGGATGCTTCAAGTACATGCTCCCCGCTT
CGGATGTGTCGTGCCTGGCTACTCAACGAGCGATGGCAGCTACAACGGTT
CTCTACGATGCGAGCCTGGTGTTGTTTCTCCTTGCGAAAACAAGTGTCAC
CAATGGAGGCAGGACCCTGACTGTATGGGAAAAATGCATCTCGTGGTGGT
CGCGCTTCTACGCCTGGGGATATCTGCCGTTCGTTGCCCTCTTCATACTT
ACCAGTCTTCCTGGGGTGGCAAGTGAAGAGGGGACGTTTTGCTTAGCTGG
ATCTCGAGCTGAGGGTGAGGCCACGACGGTTTCAGATACGATGGGATTCG
TGACCAACAACAGTATGCTGATCATCCAGTTTGTGCTTCTGCTGGCGATG
TTCGTGAAGCCTATGATGATATCCAACGGCGGCACTCAATCGGGGGGGGC
GATTTACCGCCGACTGGTTGTCCGAAACATTGTTTGCACTGTCGCTTTGG
TCTTGGCATACGCCATCACAACTGCCGTTGTCGTCCTGAGCGTGCTCGGA
GCTTCCCCCGGGAGCAACCAGGCGGATCTTATCGCGGACATGGCGCCTCC
GATCAACATTGTCATGACGCTCTGCCTGACTGAGATAGCCTTACCTCTCG
GGTTCTCCAGCTTTTTGAAGGCTGTCAAGGCTGGAAGGAACGAGGGAGCC
GCCTCATCACGGACGGTGATGGTCCCCGCAACAATGAAGCGGGTACCATG
TCTGCGAACTAGCGCCAGCGCCACGAAGAAGTCGGGAGGGTCTGTTGTTG
TTCCCACCGAAGTGGCGTGA
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