mRNA_Ecto-sp13_S_contig8668.20114.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: A0A6H5JPA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA3_9PHAE) HSP 1 Score: 292 bits (748), Expect = 1.050e-94 Identity = 153/242 (63.22%), Postives = 180/242 (74.38%), Query Frame = 1
Query: 7 RARTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEGEATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEIALPLGFSSFLKAVKA 732
R R LHKRLL MHFIA+ N SAGC KYM S++SCLAT+RAM AT +LYDASLVLFL+ KTSVTNG R L +WE CI+WWSRFY W L ALF+ V S EGTFCL E E T SDT+GFV NN +LIIQF LLLAMFVKP+MI G TQSGGA+YRRLV+RN+ CT+A+ YA+TT +VVL L +PGS +A +AD+ P NI +TLCLTEI+LPLGFSS +KA+KA
Sbjct: 63 RVRALHKRLLAMHFIAIANMSAGCAKYMPDVSELSCLATRRAMVATILLYDASLVLFLVGKTSVTNGNRALAIWEACITWWSRFYGWVVLTTGALFLAAQASSVPSLEGTFCLTLDLKEDEDVTFSDTLGFVINNGILIIQFALLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEISLPLGFSSCVKAIKA 304
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: A0A6H5JPA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA0_9PHAE) HSP 1 Score: 241 bits (614), Expect = 3.000e-75 Identity = 128/235 (54.47%), Postives = 159/235 (67.66%), Query Frame = 1
Query: 13 RTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDAS----------LVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEGEATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEI 687
RTLH+RLL MH +A VN AG KYMLP SD SC + RA A+ + YD S LVLFLLAKTSVTNG RTLT WE I+WWSRF+AW YLP + S PG + EGT C E E V D GF NN +L +Q+VLLLAMF+KPM++S+G TQSGGA+YRR+V+RNIVCT+ + AY ITT VVVL++L + P +++A + D+ P INI +TLCLTE+
Sbjct: 9 RTLHRRLLAMHVVASVNMGAGAAKYMLPPSDTSCRVSHRAWIASLLFYDVSAPQAVADGACLVLFLLAKTSVTNGNRTLTSWENGITWWSRFWAWIYLPVSGTVLGLSFPGEVNSEGTACFNSYGEETETREVGDVAGFAGNNVLLTVQYVLLLAMFIKPMLVSHGNTQSGGAVYRRVVIRNIVCTIGIACAYVITTVVVVLALLSSRPDTDKAAAVGDIVPSINICVTLCLTEV 243
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: D8LN54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN54_ECTSI) HSP 1 Score: 221 bits (564), Expect = 1.360e-68 Identity = 113/187 (60.43%), Postives = 135/187 (72.19%), Query Frame = 1
Query: 13 RTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEGEATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITT 573
RTLH+RLL MH IA VN SAG KYMLP SD SC + RA A+ + YDA LVLFLLAKT VTNG RTLT WEK I+WWSRF+AW YLP A F+ + PG + EGT C R E + V D GF +NN +L +Q+VLLLAMF+KPM++S G TQSGGA+YRR+V+RNIVCT+ + AY ITT
Sbjct: 9 RTLHRRLLAMHVIASVNMSAGAAKYMLPLSDTSCRVSHRAWIASLLFYDACLVLFLLAKTGVTNGNRTLTCWEKGITWWSRFWAWIYLPVSATFLGLTFPGEVNSEGTACFNSYREETDTAEVGDVAGFASNNVLLTVQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTIGIACAYVITT 195
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: A0A6H5K249_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K249_9PHAE) HSP 1 Score: 220 bits (561), Expect = 1.970e-68 Identity = 114/195 (58.46%), Postives = 138/195 (70.77%), Query Frame = 1
Query: 148 VLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEGEATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEIALPLGFSSFLKAVKA 732
V ASLVLFL+ K SVTNG R L +WE CI+WWSRFY W L A F+ V S EGTFCL E E T SD +GFV NN +LIIQF LLLA+FVKP+MI G TQSGGA+YRRLV+RN+ CT+A+ YA+TT +VVL L +PGS +A +AD+ P NI +TLCLTE++LPLGFSS +KA+KA
Sbjct: 9 VRQQASLVLFLVGKASVTNGNRALAIWEACITWWSRFYGWVVLTTGAFFLAAQASSVPSLEGTFCLTLDLQEDEDVTFSDALGFVINNGILIIQFALLLAIFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTELSLPLGFSSCVKAIKA 203
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: A0A6H5JY97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY97_9PHAE) HSP 1 Score: 209 bits (533), Expect = 4.700e-62 Identity = 122/264 (46.21%), Postives = 167/264 (63.26%), Query Frame = 1
Query: 13 RTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEG---TFCLAGSRAEGEATTVSDT-MGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEIALPLGFSSFLKAVK-------AGRNEGAASSRTVM 771
R LH LL+ HF++V+ A FKY LP ++ +C AT + + + +LYDASL+ FLLAK VTNG R L WE I W SR YAW YLP VA+ I G ++E TFC+ G + + V+D +G+ +N L+IQFVLLL +FV+P+++ G+QSG A+YR +V++NI CT+A+V AYA+TT VV+ +++ S SN A L AD+ P +N +TLCLTEIALPLGFSS KA + NEG + T M
Sbjct: 82 RFLHITLLVTHFVSVITGVAAVFKYTLPVTEANCTATHKVLVSMILLYDASLLTFLLAKVHVTNGHRKLAWWETVIVWISRGYAWIYLPIVAVVIPYQFRGGTNDEASVKTFCVNGYHMDDDTDEVNDNVLGYGSNMGSLVIQFVLLLILFVRPLLVRLEGSQSGEAMYRMVVIKNITCTIAVVTAYAVTTVVVIAALIRQSNDSNTASLFADITPLVNQFVTLCLTEIALPLGFSSCWKACSLELCSWSSSPNEGPSDLETAM 345
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: D8LG96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG96_ECTSI) HSP 1 Score: 172 bits (437), Expect = 3.530e-48 Identity = 106/238 (44.54%), Postives = 144/238 (60.50%), Query Frame = 1
Query: 13 RTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEGEATTVSDTM-GFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEIALPLGFSSFLKA 723
R LH LL+ H ++V+ A FKY LP + +C AT + + + +LYDASL+ FLLAK VTNG R L WE I W SR YAW YLP VA+ I G ++E TFC+ G + +A V + + G+ +N LIIQFVLLL +FV+P+++ G+QSG AIYRR+V++NI CT+A+V AYA+TT VV+ ++L + SN IALPLGF+S KA
Sbjct: 82 RFLHITLLVTHVVSVMAVVAALFKYTLPVTVENCTATHKVLVSMLLLYDASLLTFLLAKVHVTNGHRKLAWWETAIVWISRGYAWIYLPIVAVAIPYQFRGGTNDERTFCINGYNMDDDADEVHENIRGYGSNMGSLIIQFVLLLILFVRPLLVRLEGSQSGEAIYRRVVIKNITCTIAVVTAYAVTTVVVIAALLRQNNDSNT---------------------IALPLGFTSCWKA 298
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: D7G2C9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C9_ECTSI) HSP 1 Score: 164 bits (416), Expect = 2.010e-46 Identity = 88/175 (50.29%), Postives = 115/175 (65.71%), Query Frame = 1
Query: 217 LTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEG--EATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEIALPLGFSSFLKAVKAG 735
L WEK I WWSR Y W YLP +AL + T PG GTFC G G E TT ++ F NN +L++QF+LLL +FV+PM++ G QSGGA+YRR+V+RN+ CT +V++YAITT VVV+++L S SN++ I D+A N + TLCLTEI LPLGF S +KA G
Sbjct: 2 LAWWEKAIRWWSRLYGWVYLPLMALMLGTRFPGGTDPAGTFCYNGIVPTGASELTTSNNAQSFGINNVLLVVQFILLLGLFVQPMLVRVEGAQSGGAVYRRVVLRNVFCTAGIVISYAITTLVVVIALLRESVESNKSAQIRDVALAANSLGTLCLTEITLPLGFRSCMKACSTG 176
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: D8LG97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG97_ECTSI) HSP 1 Score: 165 bits (417), Expect = 2.310e-45 Identity = 89/208 (42.79%), Postives = 131/208 (62.98%), Query Frame = 1
Query: 7 RARTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAGSRAEG----EATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSN 618
+ R LH LL+ H +A++ ++ KY LP + +C AT + A +L+DASL+ FLL K VTNG R L+ WEK + W R +AW YLP ++F+ + PG +EEGTFC G + + E + G+ N+ML++Q+VLLL +FV+P+M+ G QSGGA+YR +V+RNI CTVA+V++Y ITT V V+++L P
Sbjct: 96 KVRFLHIALLLEHIVALIAIASTVLKYALPVTASNCNATHKVSTAFAILFDASLLTFLLFKVDVTNGIRKLSCWEKGVIWICRAFAWIYLPLASIFVSATYPGGTNEEGTFCENGFKRDEDVNYEREASDNAYGYAVTNAMLLVQYVLLLILFVRPLMVRLEGAQSGGAVYRSVVIRNISCTVAVVVSYIITTIVTVIALLRQHPNDT 303
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: D8LN45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN45_ECTSI) HSP 1 Score: 160 bits (405), Expect = 2.960e-45 Identity = 86/148 (58.11%), Postives = 109/148 (73.65%), Query Frame = 1
Query: 292 FILTS-LPGVASEEGTFCLAGSRAEGEATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSNQADLIADMAPPINIVMTLCLTEIALPLGFSSFLKAVKA 732
FIL S + V S EG FCLA E E T SDT+GFV NN +L+IQFVLLLAMFVKP+MI G QSGGA+YRRLV+RN+ CT+ + YA+TT +VVL L +PGS +A +AD+ P NI +TLC+TE++LPLGFSS +K++KA
Sbjct: 26 FILASQVSSVPSPEGNFCLALDLQENEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHIQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCVTEMSLPLGFSSCVKSIKA 173
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Match: A0A6H5JQ65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ65_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.170e-42 Identity = 86/207 (41.55%), Postives = 129/207 (62.32%), Query Frame = 1
Query: 10 ARTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVLYDASLVLFLLAKTSVTNGGRTLTVWEKCISWWSRFYAWGYLPFVALFILTSLPGVASEEGTFCLAG-SRAEG---EATTVSDTMGFVTNNSMLIIQFVLLLAMFVKPMMISNGGTQSGGAIYRRLVVRNIVCTVALVLAYAITTAVVVLSVLGASPGSN 618
+R+LH L++ H +A++ ++ KY LP + +C AT + A +L+DASL+ FLL K VTNG R L+ WEK + W R +AW YLP ++F+ + PG +GTFC +R E E + G+ N+ML++Q+VLLL +FV+P+M+ G QSGGA+YR +VVRN+ CT A+V++Y ITT V V+++L P
Sbjct: 51 SRSLHVALVVEHIVALIAIASTVLKYALPVTASNCNATHKISTAFAILFDASLLTFLLFKVDVTNGMRKLSCWEKGVIWICRAFAWIYLPLASIFVSATYPGANIYQGTFCENSFNRDEDVNYEREASDNAFGYAVTNAMLLVQYVLLLILFVRPLMVRLEGVQSGGAVYRSVVVRNVSCTAAVVVSYIITTIVTVIALLRQHPNDT 257 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8668.20114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8668.20114.1 >prot_Ecto-sp13_S_contig8668.20114.1 ID=prot_Ecto-sp13_S_contig8668.20114.1|Name=mRNA_Ecto-sp13_S_contig8668.20114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=290bp MRRARTLHKRLLMMHFIAVVNASAGCFKYMLPASDVSCLATQRAMAATTVback to top mRNA from alignment at Ecto-sp13_S_contig8668:1662..5473+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8668.20114.1 ID=mRNA_Ecto-sp13_S_contig8668.20114.1|Name=mRNA_Ecto-sp13_S_contig8668.20114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3812bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8668:1662..5473+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8668:1662..5473+ >mRNA_Ecto-sp13_S_contig8668.20114.1 ID=mRNA_Ecto-sp13_S_contig8668.20114.1|Name=mRNA_Ecto-sp13_S_contig8668.20114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=870bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8668:1662..5473+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |