prot_Ecto-sp13_S_contig1242.2008.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1242.2008.1
Unique Nameprot_Ecto-sp13_S_contig1242.2008.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length193
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1242.2008.1 vs. uniprot
Match: D7FQ92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ92_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 4.890e-58
Identity = 108/114 (94.74%), Postives = 110/114 (96.49%), Query Frame = 0 
Query:   80 MARRNATGAQPLGRRKRKIGSDAACGGVVGGVLRRQATGGRGRRRSTGQSFVLSATGNFHRRLRKDLEGVPELIADVRKSLTSGDNAALFTAIIEVRSKLIEGNSAPFDLPIRS 193
            MARRNATGAQPLGRRKRKIGSDA CGGVVGGV RRQATGGRGRRRSTGQSFVLSATGNFHRRLR+DLEGVPELIADVRKSL SG NAALFTA+IEVRSKLIEGNSAPFDLPIRS
Sbjct:    1 MARRNATGAQPLGRRKRKIGSDADCGGVVGGVFRRQATGGRGRRRSTGQSFVLSATGNFHRRLRRDLEGVPELIADVRKSLISGANAALFTAVIEVRSKLIEGNSAPFDLPIRS 114
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BLAST of mRNA_Ecto-sp13_S_contig1242.2008.1 vs. uniprot
Match: A0A6H5L4F9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4F9_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 6.500e-56
Identity = 105/114 (92.11%), Postives = 106/114 (92.98%), Query Frame = 0 
Query:   80 MARRNATGAQPLGRRKRKIGSDAACGGVVGGVLRRQATGGRGRRRSTGQSFVLSATGNFHRRLRKDLEGVPELIADVRKSLTSGDNAALFTAIIEVRSKLIEGNSAPFDLPIRS 193
            MARRNATG QPLGRRKRKIGSDA CGGVVGGV RRQATGGRGRRRSTGQSFVLSATGNFHRRLRKDLEGVPELIADVRKSL S DNAAL  A+IEVRSKLIEGNSAPFD PIRS
Sbjct:    1 MARRNATGVQPLGRRKRKIGSDADCGGVVGGVFRRQATGGRGRRRSTGQSFVLSATGNFHRRLRKDLEGVPELIADVRKSLISRDNAALIAAVIEVRSKLIEGNSAPFDRPIRS 114
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1242.2008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ92_ECTSI4.890e-5894.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4F9_9PHAE6.500e-5692.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1242contigEcto-sp13_S_contig1242:15507..16879 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1242.2008.1mRNA_Ecto-sp13_S_contig1242.2008.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1242 15507..16880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1242.2008.1 ID=prot_Ecto-sp13_S_contig1242.2008.1|Name=mRNA_Ecto-sp13_S_contig1242.2008.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=193bp
AFCVSLSQTAPVCASLWSACCLARDCPWVEIDSQTRGDIEGAEVWQHADQ
LVKAKKRKEKRGLRRDTRDRQQAAEAPREMARRNATGAQPLGRRKRKIGS
DAACGGVVGGVLRRQATGGRGRRRSTGQSFVLSATGNFHRRLRKDLEGVP
ELIADVRKSLTSGDNAALFTAIIEVRSKLIEGNSAPFDLPIRS
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