prot_Ecto-sp13_S_contig8628.20065.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8628.20065.1
Unique Nameprot_Ecto-sp13_S_contig8628.20065.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length61
Homology
BLAST of mRNA_Ecto-sp13_S_contig8628.20065.1 vs. uniprot
Match: D8LDQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ9_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 2.000e-24
Identity = 51/62 (82.26%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 MPVFFFLDPEMLDDPAMDSVNNVTLSYTFFQTAEEDAVLEEEKADEDE--DGRGGRLAVAAQ 60
            MPVFFFLDPEMLDDPAMDSVNNVTLSYTFFQTAEEDAV EE         DGRGGRLAV AQ
Sbjct:    1 MPVFFFLDPEMLDDPAMDSVNNVTLSYTFFQTAEEDAVPEEXXXXXXXXXDGRGGRLAVTAQ 62          
BLAST of mRNA_Ecto-sp13_S_contig8628.20065.1 vs. uniprot
Match: A0A835ZEK6_9STRA (Cytochrome c oxidase assembly protein CtaG/Cox11-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEK6_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.690e-14
Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    1 MPVFFFLDPEMLDDPAMDSVNNVTLSYTFFQTAEEDAVLEEEKADEDED-----------GRGGRL 55
            MPV FF+DPEMLDDPAMD+V+++TLSYTFF+T EEDAV E +  DE E+           GRG RL
Sbjct:  189 MPVLFFIDPEMLDDPAMDNVSDITLSYTFFKTGEEDAVEEPQVVDEVEEEDEEDVGVTAAGRGWRL 254          
BLAST of mRNA_Ecto-sp13_S_contig8628.20065.1 vs. uniprot
Match: A0A5D6YBM5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBM5_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.710e-10
Identity = 29/56 (51.79%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    1 MPVFFFLDPEMLDDPAMDSVNNVTLSYTFFQTAEEDAVLEEEKADEDEDGRGGRLA 56
            MPVFFF+DPE+ DDP+M +V+N+TLSYTFF+T +    + EE  +E+E+G+    A
Sbjct:  178 MPVFFFIDPEICDDPSMSAVHNITLSYTFFKTDD----VNEEDVEEEEEGKASAEA 229          
BLAST of mRNA_Ecto-sp13_S_contig8628.20065.1 vs. uniprot
Match: A0A482RTI3_9ARCH (Cytochrome c oxidase assembly protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTI3_9ARCH)

HSP 1 Score: 63.2 bits (152), Expect = 1.830e-10
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 MPVFFFLDPEMLDDPAMDSVNNVTLSYTFFQTAEEDA 37
            MPVFFF+DP+  DDPAMD+VN++TLSYTFF+T +E A
Sbjct:  184 MPVFFFIDPQFADDPAMDTVNSITLSYTFFKTGDETA 220          
BLAST of mRNA_Ecto-sp13_S_contig8628.20065.1 vs. uniprot
Match: A0A485LJQ5_9STRA (Aste57867_22012 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJQ5_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.080e-10
Identity = 26/36 (72.22%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 MPVFFFLDPEMLDDPAMDSVNNVTLSYTFFQTAEED 36
            MPVFFF+DPEM+DDP+M +V+N+TLSYTFFQT + D
Sbjct:  182 MPVFFFIDPEMVDDPSMHNVSNITLSYTFFQTNDVD 217          
BLAST of mRNA_Ecto-sp13_S_contig8628.20065.1 vs. uniprot
Match: A0A662WVH6_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVH6_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.140e-10
Identity = 28/47 (59.57%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 MPVFFFLDPEMLDDPAMDSVNNVTLSYTFFQTAEEDAVLEEEKADED 47
            MPVFFF+DPE+ DDP+M+ V+N+TLSYTFF+T   D V E++  DE+
Sbjct:   49 MPVFFFIDPEICDDPSMNGVHNITLSYTFFKT---DDVNEDDVDDEE 92          
BLAST of mRNA_Ecto-sp13_S_contig8628.20065.1 vs. uniprot
Match: W7T859_9STRA (Cox11 cytochrome c oxidase assembly protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T859_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 4.100e-10
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 0
Query:    1 MPVFFFLDPEMLDDPAMDSVNNVTLSYTFFQTAEE--DAVLEEEKADEDEDGRGGRLAV 57
            MPVFFF+DPEML+DP+MD+V+ +TLSYTFF+T EE  + V E  + + +  G GG  AV
Sbjct:  228 MPVFFFVDPEMLNDPSMDNVHEITLSYTFFKTDEENEEEVQEILRRNPNFPGSGGAHAV 286          
BLAST of mRNA_Ecto-sp13_S_contig8628.20065.1 vs. uniprot
Match: A0A4D9CVM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVM6_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 4.660e-10
Identity = 26/35 (74.29%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    1 MPVFFFLDPEMLDDPAMDSVNNVTLSYTFFQTAEE 35
            MPVFFF+DPEML+DP+MD+V+ +TLSYTFF+T EE
Sbjct:  160 MPVFFFVDPEMLNDPSMDNVHEITLSYTFFKTDEE 194          
BLAST of mRNA_Ecto-sp13_S_contig8628.20065.1 vs. uniprot
Match: A0A0W8D1I8_PHYNI (Cytochrome c oxidase assembly protein COX11 n=16 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D1I8_PHYNI)

HSP 1 Score: 62.8 bits (151), Expect = 5.180e-10
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 MPVFFFLDPEMLDDPAMDSVNNVTLSYTFFQTAEEDAVLEEEKADED 47
            MPVFFF+DPE+ DDP+M+ V+N+TLSYTFF+T   D V E+E  DED
Sbjct:  349 MPVFFFIDPEICDDPSMNGVHNITLSYTFFKT---DDVSEDEVDDED 392          
BLAST of mRNA_Ecto-sp13_S_contig8628.20065.1 vs. uniprot
Match: M4QL95_JAKLI (Heme biosynthesis protein n=1 Tax=Jakoba libera TaxID=143017 RepID=M4QL95_JAKLI)

HSP 1 Score: 60.5 bits (145), Expect = 1.070e-9
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0
Query:    1 MPVFFFLDPEMLDDPAMDSVNNVTLSYTFFQTAEE 35
            MPVFFFLDP++LDDP M  +++VTLSYTFFQ AE+
Sbjct:  155 MPVFFFLDPDLLDDPLMSDIDHVTLSYTFFQVAED 189          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8628.20065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDQ9_ECTSI2.000e-2482.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZEK6_9STRA2.690e-1459.09Cytochrome c oxidase assembly protein CtaG/Cox11-d... [more]
A0A5D6YBM5_9STRA1.710e-1051.79Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A482RTI3_9ARCH1.830e-1070.27Cytochrome c oxidase assembly protein n=1 Tax=arch... [more]
A0A485LJQ5_9STRA3.080e-1072.22Aste57867_22012 protein n=1 Tax=Aphanomyces stella... [more]
A0A662WVH6_9STRA3.140e-1059.57Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
W7T859_9STRA4.100e-1055.93Cox11 cytochrome c oxidase assembly protein n=1 Ta... [more]
A0A4D9CVM6_9STRA4.660e-1074.29Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A0W8D1I8_PHYNI5.180e-1063.83Cytochrome c oxidase assembly protein COX11 n=16 T... [more]
M4QL95_JAKLI1.070e-971.43Heme biosynthesis protein n=1 Tax=Jakoba libera Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007533Cytochrome c oxidase assembly protein CtaG/Cox11PFAMPF04442CtaG_Cox11coord: 1..31
e-value: 5.7E-10
score: 39.4
IPR023471Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamilyGENE3D2.60.370.10coord: 1..49
e-value: 9.9E-13
score: 49.7
IPR023471Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamilySUPERFAMILY110111Ctag/Cox11coord: 1..34
NoneNo IPR availablePANTHERPTHR21320:SF3CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11, MITOCHONDRIALcoord: 1..42
NoneNo IPR availablePANTHERPTHR21320CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATEDcoord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8628contigEcto-sp13_S_contig8628:496..678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8628.20065.1mRNA_Ecto-sp13_S_contig8628.20065.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8628 496..678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8628.20065.1 ID=prot_Ecto-sp13_S_contig8628.20065.1|Name=mRNA_Ecto-sp13_S_contig8628.20065.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=61bp
MPVFFFLDPEMLDDPAMDSVNNVTLSYTFFQTAEEDAVLEEEKADEDEDG
RGGRLAVAAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007533Cyt_c_oxidase_assmbl_CtaG
IPR023471CtaG/Cox11_dom_sf