prot_Ecto-sp13_S_contig1241.2002.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1241.2002.1
Unique Nameprot_Ecto-sp13_S_contig1241.2002.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length483
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1241.2002.1 vs. uniprot
Match: D8LEL2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL2_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 7.580e-122
Identity = 198/234 (84.62%), Postives = 204/234 (87.18%), Query Frame = 0 
Query:  248 VRGYYVGPLLDSSFDLLMLREPVADPTDQSLYVNRTRDKIEKRRALREQQHRDGCAGGVESGGVGGAVXXXDCGSXXSNSRGGGHGQRGVVENVVAATGNSAGEKTSAAPSAALEKCTPVEPLRAGDLVSPITINLEREHVMAERRRLYQIDSDFAARKIARVAGYGRSNYTRSKLLTHKAKNAAFTKELLKQPPGVGGVAAKCPRGLRSHFLGLQNFEYDWGGGGRRGGGVTG 481
            +RGYYVGPLLDSSFDLLMLREPV DPTDQS+YVNRTRDKIE+RRALREQQHR GCAGG  SGG     XXX    XX       HGQRG VENV AA GNSAGEKTSAAPSAA EK TPVEPLRAGDLVSPIT NLEREHVMAERRRLYQIDSDFAARK ARVAG GRSNY+RSK+LTHK KNAAFTKELLKQ PGVGGVAAKCPRGL+SHFLGLQNFEYDWGGGGRRGGGVTG
Sbjct:    1 MRGYYVGPLLDSSFDLLMLREPVVDPTDQSVYVNRTRDKIEQRRALREQQHRGGCAGGAGSGGXXXXXXXXXXXXXXXXXXXXXHGQRGAVENVAAAAGNSAGEKTSAAPSAAPEKWTPVEPLRAGDLVSPITTNLEREHVMAERRRLYQIDSDFAARKNARVAGCGRSNYSRSKMLTHKTKNAAFTKELLKQAPGVGGVAAKCPRGLKSHFLGLQNFEYDWGGGGRRGGGVTG 234
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1241.2002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEL2_ECTSI7.580e-12284.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1241contigEcto-sp13_S_contig1241:11955..15076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1241.2002.1mRNA_Ecto-sp13_S_contig1241.2002.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1241 11955..15076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1241.2002.1 ID=prot_Ecto-sp13_S_contig1241.2002.1|Name=mRNA_Ecto-sp13_S_contig1241.2002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=483bp
MPPSDVSGESSTTTEAPGEGFLGLDLAFNCIGRAGTTALHRALSSDATSV
LFLELRGNETKGSTERRATTSLEPRNHRSDHNGGGGGGGGGVNNNSNGVH
TNSRGVTKSNKYDDDDDVSNSIPVETPPLEVLLEEIGHVCAERRRARRLR
GEHLRPHHRRCSAAADRQELGAPTSLPPRRTAVAAQRQRSTPQSAVLHPG
RDQRPAPGTSTAAFGVGGDTGDIGSTPRLPGHGNSVAKPRPLEGALPVRG
YYVGPLLDSSFDLLMLREPVADPTDQSLYVNRTRDKIEKRRALREQQHRD
GCAGGVESGGVGGAVGGGDCGSGGSNSRGGGHGQRGVVENVVAATGNSAG
EKTSAAPSAALEKCTPVEPLRAGDLVSPITINLEREHVMAERRRLYQIDS
DFAARKIARVAGYGRSNYTRSKLLTHKAKNAAFTKELLKQPPGVGGVAAK
CPRGLRSHFLGLQNFEYDWGGGGRRGGGVTGM*
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