mRNA_Ecto-sp13_S_contig8482.19875.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A6H5KI28_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI28_9PHAE) HSP 1 Score: 483 bits (1244), Expect = 5.860e-170 Identity = 241/247 (97.57%), Postives = 242/247 (97.98%), Query Frame = 1
Query: 1 MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGSSLRGEYVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTLYGVSDL 741
MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRG SLRGEYVSPA NHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGG ESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLE AFQLAVHHPATLP+VHCISAHKGQGMGEFQNTLYGVSDL
Sbjct: 1 MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGLSLRGEYVSPASFNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGAESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLEGAFQLAVHHPATLPIVHCISAHKGQGMGEFQNTLYGVSDL 247
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A835YYM3_9STRA (YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM3_9STRA) HSP 1 Score: 206 bits (525), Expect = 5.290e-61 Identity = 109/240 (45.42%), Postives = 146/240 (60.83%), Query Frame = 1
Query: 52 TSSPWVWVATGVDPASAIH--PPPRKRGS-SLRGEYVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALR-----EGGPESPQA--FLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTLYGVSDL 741
T SPWVW G+D SA+H P RG +++ + P +LP AG PEVAF GRSN GKSTLVG L+ N KLVRASK PGCT+TVNYF L + G E +A ++VDLPGYGFA+ + V+ W AV ++ R ++LRRTFVL+DGRHG++ DE M++ L V +VLTK D+ + + +E + A H A PVVH +SA G G+ + +T+Y V+ L
Sbjct: 3 TKSPWVWTMKGMDADSAVHRTDPDIARGCRAMQAGFFPPNLFKFDLPKAGVPEVAFCGRSNVGKSTLVGTLINNTKLVRASKEPGCTRTVNYFGLTAPTRIKKGSEVDRAAVYMVDLPGYGFAKAPVQEVQAWTAAVEGFIVNRDCALLRRTFVLIDGRHGVKQHDEDMMTLLDDHGVSYQIVLTKADQLTKRDIAVVVEGVMRAAARHAACYPVVHVVSARDGHGVLQLLDTIYYVTGL 242
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A482SLS6_9ARCH (Probable GTP-binding protein EngB n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLS6_9ARCH) HSP 1 Score: 174 bits (442), Expect = 2.110e-48 Identity = 91/206 (44.17%), Postives = 128/206 (62.14%), Query Frame = 1
Query: 106 HPPPRKRGSSLRGEYVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQA-FLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVH--HPATLPVVHCISAHKGQGMGEFQ 714
H K+ SL Y+ P+Y NH+LP+AG PEVAF+GRSN GKS+LV LLG L+R SK PGCT T+NY+AL +G A +L+D+PGYGFA+ +K+ + W + V SYL R +LRR FVL+D R G+Q D +M+ L+ + VVLTK D S ++ + L F + + + LP+VH +SA KG G+ + +
Sbjct: 61 HKSDAKKIFSLNPTYIPPSYFNHQLPSAGRPEVAFVGRSNVGKSSLVEALLGTKGLLRISKEPGCTTTLNYYALAKGSALDDHACYLIDMPGYGFAKIAKQQQKKWLEIVNSYLMNRDQLLLRRVFVLIDSRRGVQMQDVEMMEMLNHAHIPYQVVLTKKDLVSDKEIKEKLFELFCVISRKKNNSCLPLVHVVSALKGLGLEDLR 266
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A7S3GRN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GRN4_9STRA) HSP 1 Score: 166 bits (421), Expect = 2.660e-45 Identity = 93/231 (40.26%), Postives = 131/231 (56.71%), Query Frame = 1
Query: 46 VATSSPWVWVATGVDPASAIHP--PPRKRGSSLRGEYVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFAL-REGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQL--AVHHPATLPVVHCISAHKGQGMGEFQNTL 723
V T++ ++ T +DP + P K S+ Y+ P+ LN+ LPT G PE AF+GRSN GKS+L+ L+GN KLV SK PGCT+++NY+ L +E + A+ VDLPGYGFAR+SK + W + Y+ R SVLRR FVLVD R G+ D M+ L+ + +V TKVD S +L SL AF + + A LP + +S G+ F+ T+
Sbjct: 37 VQTTTSSIYTTTELDPQYDLTKWGPAAKTLFSMHPSYIHPSELNYGLPTNGVPEFAFVGRSNVGKSSLIDALMGNRKLVNVSKEPGCTRSINYYGLSKEKTGKDYSAYFVDLPGYGFARKSKEEQQKWTNMIHQYVSSRDQSVLRRVFVLVDSRRGINNHDATMMDTLNKTFIPYQIVFTKVDLTSKQELYTSLGQAFSVINSSMGGACLPFIPTLSTVDKTGLDHFKLTM 267
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A6N6VR93_9HYPH (Probable GTP-binding protein EngB n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VR93_9HYPH) HSP 1 Score: 160 bits (406), Expect = 2.480e-43 Identity = 85/187 (45.45%), Postives = 113/187 (60.43%), Query Frame = 1
Query: 178 LPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTLYGVSD 738
LP G PE+AF GRSN GKS+LV L G L R S PG T+ +N+FAL G P +P LVDLPGYG+ARE+K V W + V YL GR+S LRR VL+D RHGL+ +D + + L + V VVLTK+DK P+++ LE + H A P V S+ KG+G+ E + + G++D
Sbjct: 62 LPPMGGPEIAFAGRSNVGKSSLVNALTGRSTLARTSNTPGRTQQLNFFAL--GQPGNPALILVDLPGYGYARETKATVAAWTRLVMDYLRGRTS--LRRVIVLIDARHGLKENDHETMKLLDTAAVSYQVVLTKIDKLKPSEVAPRLEEVREGIRRHVAAHPTVIATSSVKGEGIAELRAEIAGLAD 244
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A1G7WQA0_9PROT (Probable GTP-binding protein EngB n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7WQA0_9PROT) HSP 1 Score: 159 bits (401), Expect = 4.840e-43 Identity = 86/192 (44.79%), Postives = 111/192 (57.81%), Query Frame = 1
Query: 148 YVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTL 723
+V A N +LP AG PEVAFIGRSN GKS+L+ L G+ L R S PG T+ +N+F L + + LVDLPGYG+A+ K+ V WN + +YL+GR+ LRRT VL+D RHGL+ D M+ L V VLTK DK P L L++ Q HPA P + SA KG G+ E + TL
Sbjct: 29 FVRGATKNADLPPAGPPEVAFIGRSNVGKSSLINALTGHNGLARTSVTPGRTQQINFFDL------AGRLTLVDLPGYGYAKAPKKLVESWNGLIRNYLKGRAP--LRRTLVLIDARHGLKDSDHAMMDLLDKAAVNYQAVLTKADKIGPTSLATRLKDTAQQLARHPAAHPEIAATSAEKGTGIAELRATL 212
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A0P0EPD7_AZOBR (Probable GTP-binding protein EngB n=11 Tax=Azospirillum TaxID=191 RepID=A0A0P0EPD7_AZOBR) HSP 1 Score: 155 bits (391), Expect = 1.490e-41 Identity = 84/199 (42.21%), Postives = 115/199 (57.79%), Query Frame = 1
Query: 145 EYVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTLYGVSDL 741
+++ A +LP A PEVAF GRSN GKS+LV L G L R S PG T+ +N+F L + LVD+PGYG+A+ESK + WN V +L GR + LRR VLVD RHGL+P+DE++++ L V +VVLTK DK +L + + HPA P +H SA KGQG+ E + +L ++ L
Sbjct: 29 DFIWGAQTAEQLPEADLPEVAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQQLNFFNLGN------RLKLVDMPGYGYAKESKEKIEIWNDMVRRFLRGRVT--LRRALVLVDSRHGLKPNDEEIMTMLDQAAVPYVVVLTKSDKVRSQELAEVSKRTVAAIKKHPAAFPEIHATSAEKGQGIAELRASLAQLASL 219
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A0F2KYA2_9PROT (Probable GTP-binding protein EngB n=1 Tax=Azospirillum thiophilum TaxID=528244 RepID=A0A0F2KYA2_9PROT) HSP 1 Score: 154 bits (389), Expect = 3.580e-41 Identity = 85/194 (43.81%), Postives = 118/194 (60.82%), Query Frame = 1
Query: 145 EYVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVH-HPATLPVVHCISAHKGQGMGEFQNTL 723
++V A ++LP A PEVAF GRSN GKS+LV L G L R S PG T+ +N+F L + + LVD+PGYG+A+ESK V WN V +L GR + LRR VL+D RHGL+P+D+++++ L V +VVLTK DK PA+L + A +L + HPA P +H S+ KG G+ E + +L
Sbjct: 35 DFVWGANALNQLPEADLPEVAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQQLNFFNLGD------RLKLVDMPGYGYAKESKEKVEAWNDMVRRFLRGRVT--LRRALVLIDARHGLKPNDDEIMAMLDRTAVPYVVVLTKADKVKPAEL-DKVRKATELGLKKHPAAFPDIHVTSSEKGTGIAELRASL 219
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A1I7NU75_9HYPH (Probable GTP-binding protein EngB n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7NU75_9HYPH) HSP 1 Score: 153 bits (386), Expect = 7.650e-41 Identity = 81/186 (43.55%), Postives = 108/186 (58.06%), Query Frame = 1
Query: 166 LNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTL 723
L+H LP PE+AF GRSN GKS+L+ L+G +L RAS PG T+ +N+F PE FLVD+PGYGFA K V WN+ + +YL GR + L R F+L+D RHGL+P D+++L L V VVLTK DK P L + +E + HPA P + S+ KG G E + T+
Sbjct: 32 LDH-LPPDDRPEIAFAGRSNVGKSSLINALVGQLRLARASNTPGRTQELNFFT----DPER-DLFLVDMPGYGFAEAPKEKVAAWNKVIRAYLAGRRT--LLRVFLLIDARHGLKPPDDEILDLLDGAAVSYQVVLTKADKIKPTDLEKVMERTLKALAKHPAAFPAIIATSSEKGLGFEELRGTI 209
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: UPI001FE65B25 (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Azospirillum rugosum TaxID=416170 RepID=UPI001FE65B25) HSP 1 Score: 152 bits (383), Expect = 1.730e-40 Identity = 83/183 (45.36%), Postives = 110/183 (60.11%), Query Frame = 1
Query: 175 ELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTL 723
+LP A PEVAF GRSN GKS+LV L G L R S PG T+ +N+F L GG + LVD+PGYG+A+ESK V WN V YL+GR + LRR VL+D RHGL+P+D+++++ L V +VVLTK DK +L + + HPA P VH S+ KG G+ E + +L
Sbjct: 31 QLPEADLPEVAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQQLNFFDL--GG----RLKLVDMPGYGYAKESKEKVEAWNDMVRRYLKGRVT--LRRALVLIDSRHGLKPNDDEIMTMLDKAAVPYVVVLTKADKVRSQELAEVTKRCEAGLKKHPAAFPQVHITSSEKGLGIAELRASL 205 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8482.19875.1 >prot_Ecto-sp13_S_contig8482.19875.1 ID=prot_Ecto-sp13_S_contig8482.19875.1|Name=mRNA_Ecto-sp13_S_contig8482.19875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=248bp MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGSSLRGEYback to top mRNA from alignment at Ecto-sp13_S_contig8482:2560..3743+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8482.19875.1 ID=mRNA_Ecto-sp13_S_contig8482.19875.1|Name=mRNA_Ecto-sp13_S_contig8482.19875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1184bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8482:2560..3743+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8482:2560..3743+ >mRNA_Ecto-sp13_S_contig8482.19875.1 ID=mRNA_Ecto-sp13_S_contig8482.19875.1|Name=mRNA_Ecto-sp13_S_contig8482.19875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=744bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8482:2560..3743+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |