prot_Ecto-sp13_S_contig8482.19875.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8482.19875.1
Unique Nameprot_Ecto-sp13_S_contig8482.19875.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length248
Homology
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A6H5KI28_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI28_9PHAE)

HSP 1 Score: 484 bits (1246), Expect = 9.510e-173
Identity = 241/247 (97.57%), Postives = 242/247 (97.98%), Query Frame = 0
Query:    1 MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGSSLRGEYVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTLYGVSDL 247
            MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRG SLRGEYVSPA  NHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGG ESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLE AFQLAVHHPATLP+VHCISAHKGQGMGEFQNTLYGVSDL
Sbjct:    1 MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGLSLRGEYVSPASFNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGAESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLEGAFQLAVHHPATLPIVHCISAHKGQGMGEFQNTLYGVSDL 247          
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A835YYM3_9STRA (YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM3_9STRA)

HSP 1 Score: 207 bits (527), Expect = 2.560e-63
Identity = 109/240 (45.42%), Postives = 146/240 (60.83%), Query Frame = 0
Query:   18 TSSPWVWVATGVDPASAIH--PPPRKRGS-SLRGEYVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALR-----EGGPESPQA--FLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTLYGVSDL 247
            T SPWVW   G+D  SA+H   P   RG  +++  +  P     +LP AG PEVAF GRSN GKSTLVG L+ N KLVRASK PGCT+TVNYF L      + G E  +A  ++VDLPGYGFA+   + V+ W  AV  ++  R  ++LRRTFVL+DGRHG++  DE M++ L    V   +VLTK D+ +   +   +E   + A  H A  PVVH +SA  G G+ +  +T+Y V+ L
Sbjct:    3 TKSPWVWTMKGMDADSAVHRTDPDIARGCRAMQAGFFPPNLFKFDLPKAGVPEVAFCGRSNVGKSTLVGTLINNTKLVRASKEPGCTRTVNYFGLTAPTRIKKGSEVDRAAVYMVDLPGYGFAKAPVQEVQAWTAAVEGFIVNRDCALLRRTFVLIDGRHGVKQHDEDMMTLLDDHGVSYQIVLTKADQLTKRDIAVVVEGVMRAAARHAACYPVVHVVSARDGHGVLQLLDTIYYVTGL 242          
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A482SLS6_9ARCH (Probable GTP-binding protein EngB n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLS6_9ARCH)

HSP 1 Score: 175 bits (443), Expect = 2.060e-50
Identity = 91/212 (42.92%), Postives = 131/212 (61.79%), Query Frame = 0
Query:   36 HPPPRKRGSSLRGEYVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQA-FLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVH--HPATLPVVHCISAHKGQGMGEFQNTLYGV 244
            H    K+  SL   Y+ P+Y NH+LP+AG PEVAF+GRSN GKS+LV  LLG   L+R SK PGCT T+NY+AL +G      A +L+D+PGYGFA+ +K+  + W + V SYL  R   +LRR FVL+D R G+Q  D +M+  L+   +   VVLTK D  S  ++ + L   F +     + + LP+VH +SA KG G+ + + ++  +
Sbjct:   61 HKSDAKKIFSLNPTYIPPSYFNHQLPSAGRPEVAFVGRSNVGKSSLVEALLGTKGLLRISKEPGCTTTLNYYALAKGSALDDHACYLIDMPGYGFAKIAKQQQKKWLEIVNSYLMNRDQLLLRRVFVLIDSRRGVQMQDVEMMEMLNHAHIPYQVVLTKKDLVSDKEIKEKLFELFCVISRKKNNSCLPLVHVVSALKGLGLEDLRLSIVEI 272          
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A7S3GRN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GRN4_9STRA)

HSP 1 Score: 166 bits (421), Expect = 4.090e-47
Identity = 93/231 (40.26%), Postives = 131/231 (56.71%), Query Frame = 0
Query:   16 VATSSPWVWVATGVDPASAIHP--PPRKRGSSLRGEYVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFAL-REGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQL--AVHHPATLPVVHCISAHKGQGMGEFQNTL 241
            V T++  ++  T +DP   +    P  K   S+   Y+ P+ LN+ LPT G PE AF+GRSN GKS+L+  L+GN KLV  SK PGCT+++NY+ L +E   +   A+ VDLPGYGFAR+SK   + W   +  Y+  R  SVLRR FVLVD R G+   D  M+  L+   +   +V TKVD  S  +L  SL  AF +  +    A LP +  +S     G+  F+ T+
Sbjct:   37 VQTTTSSIYTTTELDPQYDLTKWGPAAKTLFSMHPSYIHPSELNYGLPTNGVPEFAFVGRSNVGKSSLIDALMGNRKLVNVSKEPGCTRSINYYGLSKEKTGKDYSAYFVDLPGYGFARKSKEEQQKWTNMIHQYVSSRDQSVLRRVFVLVDSRRGINNHDATMMDTLNKTFIPYQIVFTKVDLTSKQELYTSLGQAFSVINSSMGGACLPFIPTLSTVDKTGLDHFKLTM 267          
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A6N6VR93_9HYPH (Probable GTP-binding protein EngB n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VR93_9HYPH)

HSP 1 Score: 161 bits (407), Expect = 2.940e-45
Identity = 85/187 (45.45%), Postives = 113/187 (60.43%), Query Frame = 0
Query:   60 LPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTLYGVSD 246
            LP  G PE+AF GRSN GKS+LV  L G   L R S  PG T+ +N+FAL  G P +P   LVDLPGYG+ARE+K  V  W + V  YL GR+S  LRR  VL+D RHGL+ +D + +  L +  V   VVLTK+DK  P+++   LE   +    H A  P V   S+ KG+G+ E +  + G++D
Sbjct:   62 LPPMGGPEIAFAGRSNVGKSSLVNALTGRSTLARTSNTPGRTQQLNFFAL--GQPGNPALILVDLPGYGYARETKATVAAWTRLVMDYLRGRTS--LRRVIVLIDARHGLKENDHETMKLLDTAAVSYQVVLTKIDKLKPSEVAPRLEEVREGIRRHVAAHPTVIATSSVKGEGIAELRAEIAGLAD 244          
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A1G7WQA0_9PROT (Probable GTP-binding protein EngB n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7WQA0_9PROT)

HSP 1 Score: 159 bits (401), Expect = 8.350e-45
Identity = 86/192 (44.79%), Postives = 111/192 (57.81%), Query Frame = 0
Query:   50 YVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTL 241
            +V  A  N +LP AG PEVAFIGRSN GKS+L+  L G+  L R S  PG T+ +N+F L      + +  LVDLPGYG+A+  K+ V  WN  + +YL+GR+   LRRT VL+D RHGL+  D  M+  L    V    VLTK DK  P  L   L++  Q    HPA  P +   SA KG G+ E + TL
Sbjct:   29 FVRGATKNADLPPAGPPEVAFIGRSNVGKSSLINALTGHNGLARTSVTPGRTQQINFFDL------AGRLTLVDLPGYGYAKAPKKLVESWNGLIRNYLKGRAP--LRRTLVLIDARHGLKDSDHAMMDLLDKAAVNYQAVLTKADKIGPTSLATRLKDTAQQLARHPAAHPEIAATSAEKGTGIAELRATL 212          
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A0P0EPD7_AZOBR (Probable GTP-binding protein EngB n=11 Tax=Azospirillum TaxID=191 RepID=A0A0P0EPD7_AZOBR)

HSP 1 Score: 155 bits (393), Expect = 1.370e-43
Identity = 84/199 (42.21%), Postives = 115/199 (57.79%), Query Frame = 0
Query:   49 EYVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTLYGVSDL 247
            +++  A    +LP A  PEVAF GRSN GKS+LV  L G   L R S  PG T+ +N+F L        +  LVD+PGYG+A+ESK  +  WN  V  +L GR +  LRR  VLVD RHGL+P+DE++++ L    V  +VVLTK DK    +L +  +        HPA  P +H  SA KGQG+ E + +L  ++ L
Sbjct:   29 DFIWGAQTAEQLPEADLPEVAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQQLNFFNLGN------RLKLVDMPGYGYAKESKEKIEIWNDMVRRFLRGRVT--LRRALVLVDSRHGLKPNDEEIMTMLDQAAVPYVVVLTKSDKVRSQELAEVSKRTVAAIKKHPAAFPEIHATSAEKGQGIAELRASLAQLASL 219          
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A0F2KYA2_9PROT (Probable GTP-binding protein EngB n=1 Tax=Azospirillum thiophilum TaxID=528244 RepID=A0A0F2KYA2_9PROT)

HSP 1 Score: 154 bits (390), Expect = 4.710e-43
Identity = 85/198 (42.93%), Postives = 120/198 (60.61%), Query Frame = 0
Query:   49 EYVSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVH-HPATLPVVHCISAHKGQGMGEFQNTLYGVS 245
            ++V  A   ++LP A  PEVAF GRSN GKS+LV  L G   L R S  PG T+ +N+F L +      +  LVD+PGYG+A+ESK  V  WN  V  +L GR +  LRR  VL+D RHGL+P+D+++++ L    V  +VVLTK DK  PA+L   +  A +L +  HPA  P +H  S+ KG G+ E + +L  ++
Sbjct:   35 DFVWGANALNQLPEADLPEVAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQQLNFFNLGD------RLKLVDMPGYGYAKESKEKVEAWNDMVRRFLRGRVT--LRRALVLIDARHGLKPNDDEIMAMLDRTAVPYVVVLTKADKVKPAEL-DKVRKATELGLKKHPAAFPDIHVTSSEKGTGIAELRASLAALA 223          
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: A0A1I7NU75_9HYPH (Probable GTP-binding protein EngB n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7NU75_9HYPH)

HSP 1 Score: 153 bits (386), Expect = 1.450e-42
Identity = 81/186 (43.55%), Postives = 108/186 (58.06%), Query Frame = 0
Query:   56 LNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTL 241
            L+H LP    PE+AF GRSN GKS+L+  L+G  +L RAS  PG T+ +N+F      PE    FLVD+PGYGFA   K  V  WN+ + +YL GR +  L R F+L+D RHGL+P D+++L  L    V   VVLTK DK  P  L + +E   +    HPA  P +   S+ KG G  E + T+
Sbjct:   32 LDH-LPPDDRPEIAFAGRSNVGKSSLINALVGQLRLARASNTPGRTQELNFFT----DPER-DLFLVDMPGYGFAEAPKEKVAAWNKVIRAYLAGRRT--LLRVFLLIDARHGLKPPDDEILDLLDGAAVSYQVVLTKADKIKPTDLEKVMERTLKALAKHPAAFPAIIATSSEKGLGFEELRGTI 209          
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Match: UPI001FE65B25 (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Azospirillum rugosum TaxID=416170 RepID=UPI001FE65B25)

HSP 1 Score: 152 bits (384), Expect = 2.360e-42
Identity = 83/187 (44.39%), Postives = 112/187 (59.89%), Query Frame = 0
Query:   59 ELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTLYGVS 245
            +LP A  PEVAF GRSN GKS+LV  L G   L R S  PG T+ +N+F L  GG    +  LVD+PGYG+A+ESK  V  WN  V  YL+GR +  LRR  VL+D RHGL+P+D+++++ L    V  +VVLTK DK    +L +  +        HPA  P VH  S+ KG G+ E + +L  ++
Sbjct:   31 QLPEADLPEVAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQQLNFFDL--GG----RLKLVDMPGYGYAKESKEKVEAWNDMVRRYLKGRVT--LRRALVLIDSRHGLKPNDDEIMTMLDKAAVPYVVVLTKADKVRSQELAEVTKRCEAGLKKHPAAFPQVHITSSEKGLGIAELRASLAALA 209          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8482.19875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI28_9PHAE9.510e-17397.57EngB-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A835YYM3_9STRA2.560e-6345.42YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema min... [more]
A0A482SLS6_9ARCH2.060e-5042.92Probable GTP-binding protein EngB n=1 Tax=archaeon... [more]
A0A7S3GRN4_9STRA4.090e-4740.26Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A6N6VR93_9HYPH2.940e-4545.45Probable GTP-binding protein EngB n=1 Tax=Parvibac... [more]
A0A1G7WQA0_9PROT8.350e-4544.79Probable GTP-binding protein EngB n=1 Tax=Roseospi... [more]
A0A0P0EPD7_AZOBR1.370e-4342.21Probable GTP-binding protein EngB n=11 Tax=Azospir... [more]
A0A0F2KYA2_9PROT4.710e-4342.93Probable GTP-binding protein EngB n=1 Tax=Azospiri... [more]
A0A1I7NU75_9HYPH1.450e-4243.55Probable GTP-binding protein EngB n=4 Tax=Hyphomic... [more]
UPI001FE65B252.360e-4244.39ribosome biogenesis GTP-binding protein YihA/YsxC ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 67..193
e-value: 2.2E-15
score: 56.7
NoneNo IPR availableGENE3D3.40.50.300coord: 49..245
e-value: 5.5E-41
score: 142.2
NoneNo IPR availablePANTHERPTHR11649:SF13GTP-BINDING PROTEIN ENGB-RELATEDcoord: 49..242
NoneNo IPR availablePANTHERPTHR11649MSS1/TRME-RELATED GTP-BINDING PROTEINcoord: 49..242
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..247
IPR019987GTP-binding protein, ribosome biogenesis, YsxCTIGRFAMTIGR03598TIGR03598coord: 50..241
e-value: 2.3E-47
score: 159.1
IPR019987GTP-binding protein, ribosome biogenesis, YsxCHAMAPMF_00321GTPase_EngBcoord: 52..245
score: 22.142
IPR030393EngB-type guanine nucleotide-binding (G) domainPROSITEPS51706G_ENGBcoord: 64..247
score: 35.897
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 60..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8482contigEcto-sp13_S_contig8482:2560..3303 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8482.19875.1mRNA_Ecto-sp13_S_contig8482.19875.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8482 2560..3743 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8482.19875.1 ID=prot_Ecto-sp13_S_contig8482.19875.1|Name=mRNA_Ecto-sp13_S_contig8482.19875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=248bp
MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGSSLRGEY
VSPAYLNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGC
TKTVNYFALREGGPESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEG
RSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPA
QLVQSLENAFQLAVHHPATLPVVHCISAHKGQGMGEFQNTLYGVSDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR019987GTP-bd_ribosome_bio_YsxC
IPR030393G_ENGB_dom
IPR027417P-loop_NTPase