prot_Ecto-sp13_S_contig10169.197.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10169.197.1
Unique Nameprot_Ecto-sp13_S_contig10169.197.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length133
Homology
BLAST of mRNA_Ecto-sp13_S_contig10169.197.1 vs. uniprot
Match: D8LRP2_ECTSI (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP2_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 1.130e-80
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
Query:    1 GGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDLEAVGEA 132
            GGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDLEAVGEA
Sbjct: 1164 GGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDLEAVGEA 1295          
BLAST of mRNA_Ecto-sp13_S_contig10169.197.1 vs. uniprot
Match: A0A7S2AZM0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZM0_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.160e-73
Identity = 109/132 (82.58%), Postives = 124/132 (93.94%), Query Frame = 0
Query:    1 GGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDLEAVGEA 132
            GGNA+LSLD+ EEPY GG+K+N MPPMKRFRDM+QLSGGEKTVAAL LLFAIHS+RPAPFFVMDE+DAALDN+NVKKVCNYI+ RSGDFQ IVISLKDMFYE+AD+LVGICRD +TNSSRTLTLDLE+ G++
Sbjct:  183 GGNAYLSLDDTEEPYAGGIKYNTMPPMKRFRDMDQLSGGEKTVAALALLFAIHSYRPAPFFVMDEVDAALDNVNVKKVCNYIKQRSGDFQCIVISLKDMFYEQADSLVGICRDVSTNSSRTLTLDLESFGDS 314          
BLAST of mRNA_Ecto-sp13_S_contig10169.197.1 vs. uniprot
Match: A0A7S2CTE2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTE2_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.330e-72
Identity = 107/131 (81.68%), Postives = 119/131 (90.84%), Query Frame = 0
Query:    1 GGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDLEAVGE 131
            GGNA+LSLD+ EEPYLGG+K+NAMPPMKRFRDMEQLSGGEKTVAAL  LF+IHSFRPAPFFVMDE+DAALDN+NVKKVCNYI+ RS +FQ IVISLKD+FYE+AD+LVGICRD  TNSSRTLTLDL    E
Sbjct:   33 GGNAYLSLDDTEEPYLGGIKYNAMPPMKRFRDMEQLSGGEKTVAALAFLFSIHSFRPAPFFVMDEVDAALDNVNVKKVCNYIKQRSHEFQCIVISLKDIFYEQADSLVGICRDAGTNSSRTLTLDLSQFDE 163          
BLAST of mRNA_Ecto-sp13_S_contig10169.197.1 vs. uniprot
Match: A0A7S2V1Q0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Q0_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.060e-71
Identity = 112/128 (87.50%), Postives = 118/128 (92.19%), Query Frame = 0
Query:    1 GGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRS--GDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDL 126
            GGNA+LSLD+ EEP+ GGVKFNAMPPMKRFRDMEQLSGGEKTVAAL LLFAIHSFRPAPFFVMDE+DAALDNINVKKVCNYI+ RS  G  QSIVISLKDMFYEKAD+LVGICRD  TNSSRTLTLDL
Sbjct:   37 GGNAYLSLDDQEEPFHGGVKFNAMPPMKRFRDMEQLSGGEKTVAALALLFAIHSFRPAPFFVMDEVDAALDNINVKKVCNYIRQRSTDGGCQSIVISLKDMFYEKADSLVGICRDVGTNSSRTLTLDL 164          
BLAST of mRNA_Ecto-sp13_S_contig10169.197.1 vs. uniprot
Match: A0A7S2E6E8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6E8_9STRA)

HSP 1 Score: 221 bits (563), Expect = 2.590e-71
Identity = 106/126 (84.13%), Postives = 117/126 (92.86%), Query Frame = 0
Query:    1 GGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDL 126
            GGNA+LSLD+ EEPY GG+KFNAMPPMKRFRDMEQLSGGEKTVAAL LLFAIHSFRPAPFFVMDE+DAALDN+NV KVCNYI+ RSGDFQ IVISLKDMFYE++ +L+GICRD  TNSSRT+TLDL
Sbjct:   45 GGNAYLSLDDAEEPYRGGMKFNAMPPMKRFRDMEQLSGGEKTVAALALLFAIHSFRPAPFFVMDEVDAALDNVNVLKVCNYIRQRSGDFQCIVISLKDMFYERSHSLIGICRDVGTNSSRTMTLDL 170          
BLAST of mRNA_Ecto-sp13_S_contig10169.197.1 vs. uniprot
Match: A0A7S2SBG7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SBG7_9STRA)

HSP 1 Score: 222 bits (566), Expect = 1.790e-70
Identity = 108/126 (85.71%), Postives = 118/126 (93.65%), Query Frame = 0
Query:    1 GGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDL 126
            GG AFLSLD+ EEPY GG+KFNAMPPMKRFRDMEQLSGGEKTVAAL LLFAIHSFRPAPFFVMDEIDAALDN+NV KVCNYI+ RSGDFQ IVISLKDMFYE++++L+GICRD ATNSS+TLTLDL
Sbjct:  142 GGKAFLSLDDSEEPYRGGMKFNAMPPMKRFRDMEQLSGGEKTVAALSLLFAIHSFRPAPFFVMDEIDAALDNVNVLKVCNYIRQRSGDFQCIVISLKDMFYERSNSLIGICRDVATNSSKTLTLDL 267          
BLAST of mRNA_Ecto-sp13_S_contig10169.197.1 vs. uniprot
Match: A0A7S3YCQ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCQ0_HETAK)

HSP 1 Score: 221 bits (564), Expect = 1.850e-69
Identity = 106/126 (84.13%), Postives = 118/126 (93.65%), Query Frame = 0
Query:    1 GGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDL 126
            GG A+L+LD+PEEPYL GVKFNAMPPMKRFRDMEQLSGGE+TVA+L LLF++HSFRPAPFFVMDEIDAALDNINVKKVCNYI+ RSGD QSIVISLKDMFYE+AD+LVG+CRD AT  SR+LTLDL
Sbjct:  229 GGTAYLTLDDPEEPYLAGVKFNAMPPMKRFRDMEQLSGGERTVASLALLFSVHSFRPAPFFVMDEIDAALDNINVKKVCNYIKRRSGDCQSIVISLKDMFYERADSLVGVCRDRATMGSRSLTLDL 354          
BLAST of mRNA_Ecto-sp13_S_contig10169.197.1 vs. uniprot
Match: K0R031_THAOC (SMC_N domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R031_THAOC)

HSP 1 Score: 219 bits (558), Expect = 1.490e-66
Identity = 104/126 (82.54%), Postives = 118/126 (93.65%), Query Frame = 0
Query:    1 GGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDL 126
            GGNA+LSLD+ +EPYL G+KFNAMPPMKRFRDMEQLSGGEKTVAAL LLFAIHSFRPAPFF+MDE+DAALDN+NV KVCNYIQ RS DFQ IVISLKDMFYE++++LVGICRD ++NSSRT+TLDL
Sbjct:  383 GGNAYLSLDDTDEPYLSGMKFNAMPPMKRFRDMEQLSGGEKTVAALSLLFAIHSFRPAPFFIMDEVDAALDNVNVLKVCNYIQQRSSDFQCIVISLKDMFYERSESLVGICRDVSSNSSRTMTLDL 508          
BLAST of mRNA_Ecto-sp13_S_contig10169.197.1 vs. uniprot
Match: A0A6T7JRG2_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7JRG2_9STRA)

HSP 1 Score: 225 bits (574), Expect = 8.350e-66
Identity = 110/126 (87.30%), Postives = 118/126 (93.65%), Query Frame = 0
Query:    1 GGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDL 126
            GGNA+LSLD+ EEPYLGG+KFNAMPPMKRFRDMEQLSGGEKTVAAL LLFAIHSFRPAPFFVMDEIDAALDN+NV KVCNYI+ RSGDFQ IVISLKDMFYE++ +LVGICRD  TNSSRTLTLDL
Sbjct: 1148 GGNAYLSLDDTEEPYLGGMKFNAMPPMKRFRDMEQLSGGEKTVAALALLFAIHSFRPAPFFVMDEIDAALDNVNVLKVCNYIRQRSGDFQCIVISLKDMFYERSQSLVGICRDVGTNSSRTLTLDL 1273          
BLAST of mRNA_Ecto-sp13_S_contig10169.197.1 vs. uniprot
Match: A0A8J9TE18_PHATR (Hypothetical protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TE18_PHATR)

HSP 1 Score: 206 bits (525), Expect = 1.200e-65
Identity = 103/127 (81.10%), Postives = 112/127 (88.19%), Query Frame = 0
Query:    1 GGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLFAIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSG-DFQSIVISLKDMFYEKADALVGICRDHATNSSRTLTLDL 126
            GGNA+LSLD+ EEPY GG+KFNAMPPMKRFRDMEQLSGGEKTVAAL LLFAIHSF PAPFF+MDEIDAALDN+N++KVCNYI+ RS  DFQ IVISLKDMFYE +  LVGI RD  TNSS TLTLDL
Sbjct:   71 GGNAYLSLDDAEEPYKGGIKFNAMPPMKRFRDMEQLSGGEKTVAALSLLFAIHSFHPAPFFIMDEIDAALDNVNLRKVCNYIKQRSQTDFQCIVISLKDMFYEHSQGLVGIYRDVGTNSSHTLTLDL 197          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10169.197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRP2_ECTSI1.130e-80100.00Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S2AZM0_9STRA1.160e-7382.58Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2CTE2_9STRA1.330e-7281.68Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2V1Q0_9STRA1.060e-7187.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2E6E8_9STRA2.590e-7184.13Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2SBG7_9STRA1.790e-7085.71Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S3YCQ0_HETAK1.850e-6984.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K0R031_THAOC1.490e-6682.54SMC_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A6T7JRG2_9STRA8.350e-6687.30Structural maintenance of chromosomes protein n=1 ... [more]
A0A8J9TE18_PHATR1.200e-6581.10Hypothetical protein (Fragment) n=3 Tax=Phaeodacty... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 33..115
e-value: 1.1E-29
score: 103.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..131
e-value: 1.5E-41
score: 145.1
NoneNo IPR availablePANTHERPTHR18937STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBERcoord: 2..128
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10169contigEcto-sp13_S_contig10169:4787..5968 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10169.197.1mRNA_Ecto-sp13_S_contig10169.197.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10169 4787..5968 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10169.197.1 ID=prot_Ecto-sp13_S_contig10169.197.1|Name=mRNA_Ecto-sp13_S_contig10169.197.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp
GGNAFLSLDNPEEPYLGGVKFNAMPPMKRFRDMEQLSGGEKTVAALGLLF
AIHSFRPAPFFVMDEIDAALDNINVKKVCNYIQGRSGDFQSIVISLKDMF
YEKADALVGICRDHATNSSRTLTLDLEAVGEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027417P-loop_NTPase