mRNA_Ecto-sp13_S_contig8382.19748.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8382.19748.1 vs. uniprot
Match: D8LHY7_ECTSI (Heat shock protein 90 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHY7_ECTSI) HSP 1 Score: 102 bits (255), Expect = 4.640e-24 Identity = 56/62 (90.32%), Postives = 56/62 (90.32%), Query Frame = 1
Query: 1 SEETADLSWLLYETALTASGFQARRLPVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE 186
SEET DLSWLLYETALTASGFQ VEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE
Sbjct: 693 SEETKDLSWLLYETALTASGFQ-----VEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE 749
BLAST of mRNA_Ecto-sp13_S_contig8382.19748.1 vs. uniprot
Match: G3G5W9_9PHAE (Heat shock protein 90 family (Fragment) n=24 Tax=Fucaceae TaxID=3010 RepID=G3G5W9_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 6.100e-22 Identity = 47/62 (75.81%), Postives = 54/62 (87.10%), Query Frame = 1
Query: 1 SEETADLSWLLYETALTASGFQARRLPVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE 186
SEET D+SWLLY+TALTASGFQ VEDTE+FA+RVQR MAKTLNLSS++LL+E EIPDE
Sbjct: 24 SEETKDMSWLLYDTALTASGFQ-----VEDTESFASRVQRIMAKTLNLSSLELLDEAEIPDE 80
BLAST of mRNA_Ecto-sp13_S_contig8382.19748.1 vs. uniprot
Match: A0A812QET3_SYMMI (HSP90B1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QET3_SYMMI) HSP 1 Score: 60.8 bits (146), Expect = 2.650e-9 Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 4 EETADLSWLLYETALTASGFQARRLPVEDTEAFANRVQRAMAKTLNLSSMDLLEEME 174
E TADL+WLLY+TAL +SGF +TE FA R+ R MAK +N+ SMDL EE+E
Sbjct: 381 EYTADLAWLLYDTALLSSGFTQT-----ETELFAERMYRTMAKNMNIESMDLAEEIE 432
BLAST of mRNA_Ecto-sp13_S_contig8382.19748.1 vs. uniprot
Match: A0A3M6VNG1_9STRA (HATPase_c domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNG1_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 1.150e-7 Identity = 26/62 (41.94%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 1 SEETADLSWLLYETALTASGFQARRLPVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE 186
+EET DL+WLLY+TAL SGF + DT+ F++R+ R M ++ ++S++L E+E+P++
Sbjct: 744 NEETKDLAWLLYDTALINSGFD-----LSDTDHFSSRIHRIMRNSMGITSLELEPEIEVPED 800
BLAST of mRNA_Ecto-sp13_S_contig8382.19748.1 vs. uniprot
Match: A0A0P1AEL2_PLAHL (Heat shock protein 90 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEL2_PLAHL) HSP 1 Score: 56.2 bits (134), Expect = 1.150e-7 Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 4 EETADLSWLLYETALTASGFQARRLPVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE 186
EET DL+WLLY+TAL SGF + DT F+ RV R M ++ ++S+DL E+EIP++
Sbjct: 741 EETEDLAWLLYDTALVNSGFD-----MADTSHFSARVHRIMKSSMGIASLDLEPEIEIPED 796
BLAST of mRNA_Ecto-sp13_S_contig8382.19748.1 vs. uniprot
Match: F0Y644_AURAN (HATPase_c domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y644_AURAN) HSP 1 Score: 55.5 bits (132), Expect = 2.140e-7 Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 4 EETADLSWLLYETALTASGFQARRLPVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE 186
E T+DLSWLL + AL SGF+A D AF+ R R + L++ SMDLL E+E+PDE
Sbjct: 692 EYTSDLSWLLLDNALMQSGFEA-----SDVAAFSERALRILKSGLSVESMDLLPEIEVPDE 747
BLAST of mRNA_Ecto-sp13_S_contig8382.19748.1 vs. uniprot
Match: A0A835YKX1_9STRA (Hsp90 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKX1_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 2.930e-7 Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 1 SEETADLSWLLYETALTASGFQARRLPVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE 186
S E DL+WLLY+TA+ ASGF +ED +F++R+ R + +TL + S+DLL E E PDE
Sbjct: 708 SAEAEDLAWLLYDTAMAASGFT-----MEDAGSFSSRMYRVLGQTLKVESLDLLPEAE-PDE 763
BLAST of mRNA_Ecto-sp13_S_contig8382.19748.1 vs. uniprot
Match: A0A6G0WLA2_9STRA (HATPase_c domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLA2_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 2.930e-7 Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 1
Query: 1 SEETADLSWLLYETALTASGFQARRLPVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE 186
S ET DLSWLLY+ ALT SGF ++D + FA+RV R M T+ L S++L E+ +P E
Sbjct: 713 STETQDLSWLLYDAALTNSGFA-----MDDVDHFASRVYRLMKHTMGLDSLELEPELALPAE 769
BLAST of mRNA_Ecto-sp13_S_contig8382.19748.1 vs. uniprot
Match: A0A484E8C8_BRELC (HATPase_c domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8C8_BRELC) HSP 1 Score: 55.1 bits (131), Expect = 2.940e-7 Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = 1
Query: 4 EETADLSWLLYETALTASGFQARRLPVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE 186
EET DL+WLLY+TAL SGF + DT F+ RV R M + + S +L E+E+P+E
Sbjct: 754 EETKDLAWLLYDTALVNSGFD-----MSDTSQFSARVHRVMRSVMGIDSFELEPEIEVPEE 809
BLAST of mRNA_Ecto-sp13_S_contig8382.19748.1 vs. uniprot
Match: W4FIT1_9STRA (HATPase_c domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FIT1_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 4.010e-7 Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 1
Query: 7 ETADLSWLLYETALTASGFQARRLPVEDTEAFANRVQRAMAKTLNLSSMDLLEEMEIPDE 186
ET DLSWLLY+ ALT SGF ++D + FA+RV R M T+ L S+DL E+ +P E
Sbjct: 724 ETHDLSWLLYDAALTNSGFA-----MDDVDHFASRVYRLMKTTMGLDSLDLDPEINLPAE 778 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8382.19748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8382.19748.1 >prot_Ecto-sp13_S_contig8382.19748.1 ID=prot_Ecto-sp13_S_contig8382.19748.1|Name=mRNA_Ecto-sp13_S_contig8382.19748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp SEETADLSWLLYETALTASGFQARRLPVEDTEAFANRVQRAMAKTLNLSSback to top mRNA from alignment at Ecto-sp13_S_contig8382:1..728+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8382.19748.1 ID=mRNA_Ecto-sp13_S_contig8382.19748.1|Name=mRNA_Ecto-sp13_S_contig8382.19748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=728bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8382:1..728+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8382:1..728+ >mRNA_Ecto-sp13_S_contig8382.19748.1 ID=mRNA_Ecto-sp13_S_contig8382.19748.1|Name=mRNA_Ecto-sp13_S_contig8382.19748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=186bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8382:1..728+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |