prot_Ecto-sp13_S_contig83764.19745.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig83764.19745.1
Unique Nameprot_Ecto-sp13_S_contig83764.19745.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length104
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig83764.19745.1 vs. uniprot
Match: D8LN30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN30_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 2.160e-41
Identity = 76/88 (86.36%), Postives = 80/88 (90.91%), Query Frame = 0 
Query:   14 AELHRTGAGLLPCGSAGHASAVVLRVFDDGCPEGSSNERDQRGLFEERRSSANGIVGAGVGASAASLAVGRSVLESAEAATDPLVEIG 101
            +ELHRTGAGLLPCGS GHASAVVLRVFDDG PEGSSNERDQ GLFEER SSANGI+GA VGASAA++AVGR VLESAEAA D LVEIG
Sbjct:   30 SELHRTGAGLLPCGSTGHASAVVLRVFDDGRPEGSSNERDQTGLFEERGSSANGILGARVGASAANVAVGRPVLESAEAAADSLVEIG 117
[Close]
BLAST of mRNA_Ecto-sp13_S_contig83764.19745.1 vs. uniprot
Match: A0A6H5JK54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK54_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 1.810e-9
Identity = 40/70 (57.14%), Postives = 43/70 (61.43%), Query Frame = 0 
Query:   34 AVVLRVFDDGCPEGSSNERDQRGLFEERRSSANGIVGAGVGASAASLAVGRSVLESAEAATDPLVEIGEA 103
            AV L     GC E          +       ANGIVGAGVG SAAS+AVGRSVLESA+AATD LVEI EA
Sbjct:   14 AVALAALLLGCSE----------VLMTAAPKANGIVGAGVGTSAASVAVGRSVLESAKAATDSLVEIDEA 73
[Close]
BLAST of mRNA_Ecto-sp13_S_contig83764.19745.1 vs. uniprot
Match: D8LMK2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK2_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 1.100e-5
Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = 0 
Query:   33 SAVVLRVFDDGCPEGSSNERDQRGLFEERRSSANGIVGAGVGASAASLAVGRSVLESAEAATDPLVE 99
            S   +     G P  +S     RG F   +S+A GI+GAGVG SAAS+AVGR VLESAEAA DPLVE
Sbjct:   25 SGFTMTAAPKGPPTSAS-----RGDF--LKSAAIGILGAGVGISAASVAVGRPVLESAEAAADPLVE 84
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig83764.19745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LN30_ECTSI2.160e-4186.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK54_9PHAE1.810e-957.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMK2_ECTSI1.100e-555.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig83764contigEcto-sp13_S_contig83764:121..432 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig83764.19745.1mRNA_Ecto-sp13_S_contig83764.19745.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig83764 121..432 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig83764.19745.1 ID=prot_Ecto-sp13_S_contig83764.19745.1|Name=mRNA_Ecto-sp13_S_contig83764.19745.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=104bp
TTQRIQQYTLPCHAELHRTGAGLLPCGSAGHASAVVLRVFDDGCPEGSSN
ERDQRGLFEERRSSANGIVGAGVGASAASLAVGRSVLESAEAATDPLVEI
GEA*
back to top