mRNA_Ecto-sp13_S_contig8374.19741.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: D8LSU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU3_ECTSI) HSP 1 Score: 675 bits (1742), Expect = 1.340e-219 Identity = 334/350 (95.43%), Postives = 339/350 (96.86%), Query Frame = 1
Query: 1 GVPSTTEASLSSRWEAGLERAASPLLSFLQGMGAQHLCVRVVAGMMALPPPSAVEVLGDAFSGLADKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYRTLLSDKCQEEEEDSEEELKRLEDSLEALAILKDYTSPWPLDGEGRPVTAVSERGEGGARGGARGEVDVRSSTAPPTTVVCPASE 1050
GVPSTTEA LSSRWEAGLE AASPLLSFLQGMGAQHLCVRVVAGMMA+PPPSAVEVLGDAFSGLADKVMEFNH+DCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLR+LAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGI FDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVY TLLSDKCQEEEEDSEEE+KRLEDSLEALAILKDYTSPWPLD EGRPV AV+E GE GARGG RGEVDVRSSTAPPTTV PASE
Sbjct: 1764 GVPSTTEALLSSRWEAGLESAASPLLSFLQGMGAQHLCVRVVAGMMAIPPPSAVEVLGDAFSGLADKVMEFNHIDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRVLAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGIAFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYGTLLSDKCQEEEEDSEEEVKRLEDSLEALAILKDYTSPWPLDVEGRPVAAVAEGGEAGARGGGRGEVDVRSSTAPPTTVGSPASE 2113
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A6H5KS52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS52_9PHAE) HSP 1 Score: 461 bits (1186), Expect = 5.640e-151 Identity = 243/325 (74.77%), Postives = 256/325 (78.77%), Query Frame = 1
Query: 1 GVPSTTEASLSSRWEAGLERAASPLLSFLQGMGAQHLCVRVVAGMMALPPPSAVEVLGDAFSGLADKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYRTLLSDKCQEEEEDSEEELKRLEDSLEALAILKDYTSP---WPLDGEGRPVTAVSERGEG 966
GVPSTTEASLSSRWEAGLE AASPLLSFLQGMGAQHLCVRVVAGMMALPPPSAVEVLGDAFSGLADKV R+ T RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVY TLLSDKCQ+ E +E+ +++ + + +P G R + + RG+G
Sbjct: 357 GVPSTTEASLSSRWEAGLESAASPLLSFLQGMGAQHLCVRVVAGMMALPPPSAVEVLGDAFSGLADKV-------------------GRKHTGT-------------RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYGTLLSDKCQKVEPMNEQRTRKISSASRLSPSSRTTRAPGRSMAKGGRWRRLLKEARRGQG 649
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A8K1CNA7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNA7_PYTOL) HSP 1 Score: 145 bits (365), Expect = 1.520e-34 Identity = 101/301 (33.55%), Postives = 152/301 (50.50%), Query Frame = 1
Query: 76 LSFLQGMGAQHLCVRVVAGMMALPPPSAVEVLGDAFSGLADKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSS--DDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLP---CVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYRTLLSDKCQEEEEDSEEELKRLEDSLEALAILKDYTSPWPLDGEGRPVTAVSERGE 963
+SFL A+ L +RV+ M +P A+ V+ + V + +D LA+G ML M + A+++FRR I + D+ R + LA +G AARAW LHQC+E+E ++ WWH L L I D++ F R EY ++LVP LLE+S D LEF Y + ++P L+YV+ L +P +P YQ+RI VL +H R++ +L T + DY+RL FV++ LL E S E + +E +E L +LK + E + + A E GE
Sbjct: 1385 VSFLVENNAELLSLRVIMSMRCVPE-DALTVVHTQVGKMLSTVYQSQRIDNLLALGLMLTMGQKDAFNSFRRQISRENVAKDFNRFQQLAKIGSDAARAWQQIAFLHQCVELEGNARWWHYLKLLDIECDHKAFQSERRDH---EYIRNLVPKLLEKSNYDYYTILEFTRHYQIDNSYPALVYVEALLLMPPEPSATP-SFEYQDRIVGVLEDIHE---QRLVAMLLRTIPQLQGTDYDRLLFVFQLLL-------EHTSYREKEEVERRMEILHVLKALAAS-----EHKLIAASEEEGE 1665
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A2D4CBX0_PYTIN (Rod_C domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBX0_PYTIN) HSP 1 Score: 141 bits (356), Expect = 1.910e-33 Identity = 91/279 (32.62%), Postives = 148/279 (53.05%), Query Frame = 1
Query: 76 LSFLQGMGAQHLCVRVVAGMMALPPPSAVEVLGDAFSGLADKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSS--DDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYRTLLSDKCQEEEEDSEEELKRLEDSLEALAILKDYTS 906
+S+L A L ++V+ M +P A+ V+ L + + +D LA+G MLA+ R+A++ FRR I + D+ R + LA +G AARAW LHQC+E+E ++ WWH L LGI D++ F +++R + Y + LVP LL +S D LEF Y + ++FP L+YV+ L P S + YQ+++ V+ +H R++ +L+T + DY RL F+++ LL E+ S E +E +E L +LK + +
Sbjct: 42 VSYLVEHNADLLSLQVMLXMRHIPE-DAINVIQTQLGKLLSTIFQSEKIDNHLALGLMLALEQREAFNGFRRQISRENVAKDFNRFQQLARIGADAARAWQQIAFLHQCVELEGNARWWHYLKLLGIQCDHKAF-QSERRDL--NYIRQLVPTLLVKSNFDYYTILEFTRHYQIDDSFPALVYVEALLVNPSAST-GLEYQDKVAGVIDDIHE---QRLVTLLLKTLPTVPGTDYSRLLFIFQLLL-------EQTSYPEKDEVERRMEVLHVLKAFAA 305
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A507EAF1_9FUNG (Rod_C domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EAF1_9FUNG) HSP 1 Score: 112 bits (280), Expect = 2.110e-23 Identity = 68/212 (32.08%), Postives = 106/212 (50.00%), Query Frame = 1
Query: 175 DAFSGLADKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHML-ETPGMICDRDYERLAFVYRTLL 807
D L VM +D LA+G ++AMP +QA++ ++ + + +Y R+ +AG+G+ A AW C ++ ++ WWH L LGI FD F + G +Q+ +VP LL R+G D+ ALEF Y + + F + YV GL + D YQ R+ +L V V RML ++ E + DYER+ F+ +L
Sbjct: 1565 DTLGRLLASVMSSRTIDQKLAVGCLVAMPLKQAFEAYKAGMSTTGQEYSRVLRIAGIGIAVASAWKQRTFRISCEDLAANAKWWHQLRLLGIPFDKDMFKYRTET---GGHQRRVVPELLHRTGFDILTALEFARSYDIEDDFVIIEYVK---GLILTASDDSDYQSRVAGILEDV--VNKERMLAALVNECLLRVSSYDYERIQFIATQIL 1768
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A4P9YCU7_ROZAC (Uncharacterized protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YCU7_ROZAC) HSP 1 Score: 99.4 bits (246), Expect = 4.560e-20 Identity = 46/145 (31.72%), Postives = 77/145 (53.10%), Query Frame = 1
Query: 199 KVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQL 633
KV F +DC +A+ M+++P A++ FR + +DY RL LA +GM W+ C ++E++ WW+ L L I FDN F R+ GEYQK+L+P +LE+S D+ ++CE + + + F ++ +
Sbjct: 132 KVFSFKELDCEVAVSLMISLPVETAFNLFRGGLSTIGNDYLRLIKLASIGMACGNLWNQRSFFVDCQQLEKNGIWWYHLNLLEIPFDNVKF----RTSKFGEYQKTLIPMILEKSDLDISSVKDYCECFDINKDFAYFEFIQQSI 272
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A075AYK9_ROZAC (Uncharacterized protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AYK9_ROZAC) HSP 1 Score: 102 bits (254), Expect = 4.770e-20 Identity = 58/205 (28.29%), Postives = 98/205 (47.80%), Query Frame = 1
Query: 199 KVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHML--ETPGMICDRDYERLAFVYRTLL 807
KV F +DC +A+ M+++P A++ FR + +DY RL LA +GM W+ C ++E++ WW+ L L I FDN F R+ GEYQK+L+P +LE+S D+ ++CE + + + F ++ + +E VL + + L+ +L E I DY ++ FV + +L
Sbjct: 1014 KVFSFKELDCEVAVSLMISLPVETAFNLFRGGLSTIGNDYLRLIKLASIGMACGNLWNQRSFFVDCQQLEKNGIWWYHLNVLEIPFDNVKF----RTSKFGEYQKTLIPMILEKSDLDISSVKDYCECFDINKDFAYFEFIQQS----------IKKREFKGNVLNVIEEIKNKEKLKDLLLNEILNNISPFDYSKIEFVLKLIL 1204
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A1Y1YCH8_9FUNG (Rod_C domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YCH8_9FUNG) HSP 1 Score: 101 bits (252), Expect = 8.950e-20 Identity = 61/205 (29.76%), Postives = 101/205 (49.27%), Query Frame = 1
Query: 199 KVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHML--ETPGMICDRDYERLAFVYRTLL 807
KV+ ++D LA+GY +++P QA+ ++ + DY RL A +G+ A W+ C ++ ++ WWH L L I FD+ F R+ EYQ+ LVP L+E++ D+ LEF Y + + + L YV L P + SYQ ++ V V + L H+L + + DYERL F+++ ++
Sbjct: 1455 KVLSSRYIDNLLALGYTISLPLEQAFTAYKAGLATVGSDYHRLIKFAAIGIGCATVWEQRGFYVNCKQLGANARWWHQLKILDIPFDDAQF----RASKHSEYQRKLVPLLMEKTNLDILTVLEFGRAYDLEDDYSYLEYVRK---LILCGPEE-SYQSQVVGV---VDDIVNKEKLLHLLISQCVPRVSPYDYERLQFIFQQII 1648
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A507FKD6_9FUNG (Rod_C domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FKD6_9FUNG) HSP 1 Score: 96.3 bits (238), Expect = 5.710e-18 Identity = 57/205 (27.80%), Postives = 100/205 (48.78%), Query Frame = 1
Query: 196 DKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVS-YQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYRTLL 807
+ + +D LA G ++ +P ++A+++F+ + + DY RL A +G+ A+ AW+ C + +++ WWH L L ++F+ + + GEYQ+ LVPALLE++G D+ +L+F Y + + F Y+ L S HD + Y+ RI +L V L H E YE++ F+ +L
Sbjct: 1532 ENIFSSRTIDQNLAFGGLMVIPPQEAFESFKFGLSTTGKDYDRLLKFAAIGIAASLAWNQRTFQVTCETLAKNAKWWHQLHLLNVSFNMDQY----KLSTSGEYQRRLVPALLEKTGLDIMTSLDFARTYNIEDDFVIFEYITQLLS----SDHDSNGYKYRIAGILDDVDNKPRLATLLH--EVCAKCSPYKYEKIGFIIDQIL 1726
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: F4PEL7_BATDJ (Rod_C domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4PEL7_BATDJ) HSP 1 Score: 82.8 bits (203), Expect = 1.690e-13 Identity = 41/138 (29.71%), Postives = 71/138 (51.45%), Query Frame = 1
Query: 178 AFSGLADKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGV 591
A LA +++ +D + +L++PT+ A+D+F+ + + D+GRL +A VG A W HD C + + WW L L I FD + ++ V G+YQ+ L+P +L+++ DL L F + Y +
Sbjct: 1369 ALKNLATQMLSAKVIDKHYTLACLLSLPTKIAFDSFKSGMATTGKDFGRLERVAKVGAMAGLVWSQHDFQANCQRLAVHAGWWQELQVLEIPFDQAKY----QASVNGDYQRELIPHILQKTDGDLETTLAFSQYYHI 1502 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8374.19741.1 >prot_Ecto-sp13_S_contig8374.19741.1 ID=prot_Ecto-sp13_S_contig8374.19741.1|Name=mRNA_Ecto-sp13_S_contig8374.19741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=351bp GVPSTTEASLSSRWEAGLERAASPLLSFLQGMGAQHLCVRVVAGMMALPPback to top mRNA from alignment at Ecto-sp13_S_contig8374:2117..6831- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8374.19741.1 ID=mRNA_Ecto-sp13_S_contig8374.19741.1|Name=mRNA_Ecto-sp13_S_contig8374.19741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4715bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8374:2117..6831- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8374:2117..6831- >mRNA_Ecto-sp13_S_contig8374.19741.1 ID=mRNA_Ecto-sp13_S_contig8374.19741.1|Name=mRNA_Ecto-sp13_S_contig8374.19741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1053bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8374:2117..6831- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |