mRNA_Ecto-sp13_S_contig8374.19741.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8374.19741.1
Unique NamemRNA_Ecto-sp13_S_contig8374.19741.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: D8LSU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU3_ECTSI)

HSP 1 Score: 675 bits (1742), Expect = 1.340e-219
Identity = 334/350 (95.43%), Postives = 339/350 (96.86%), Query Frame = 1
Query:    1 GVPSTTEASLSSRWEAGLERAASPLLSFLQGMGAQHLCVRVVAGMMALPPPSAVEVLGDAFSGLADKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYRTLLSDKCQEEEEDSEEELKRLEDSLEALAILKDYTSPWPLDGEGRPVTAVSERGEGGARGGARGEVDVRSSTAPPTTVVCPASE 1050
            GVPSTTEA LSSRWEAGLE AASPLLSFLQGMGAQHLCVRVVAGMMA+PPPSAVEVLGDAFSGLADKVMEFNH+DCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLR+LAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGI FDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVY TLLSDKCQEEEEDSEEE+KRLEDSLEALAILKDYTSPWPLD EGRPV AV+E GE GARGG RGEVDVRSSTAPPTTV  PASE
Sbjct: 1764 GVPSTTEALLSSRWEAGLESAASPLLSFLQGMGAQHLCVRVVAGMMAIPPPSAVEVLGDAFSGLADKVMEFNHIDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRVLAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGIAFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYGTLLSDKCQEEEEDSEEEVKRLEDSLEALAILKDYTSPWPLDVEGRPVAAVAEGGEAGARGGGRGEVDVRSSTAPPTTVGSPASE 2113          
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A6H5KS52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS52_9PHAE)

HSP 1 Score: 461 bits (1186), Expect = 5.640e-151
Identity = 243/325 (74.77%), Postives = 256/325 (78.77%), Query Frame = 1
Query:    1 GVPSTTEASLSSRWEAGLERAASPLLSFLQGMGAQHLCVRVVAGMMALPPPSAVEVLGDAFSGLADKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYRTLLSDKCQEEEEDSEEELKRLEDSLEALAILKDYTSP---WPLDGEGRPVTAVSERGEG 966
            GVPSTTEASLSSRWEAGLE AASPLLSFLQGMGAQHLCVRVVAGMMALPPPSAVEVLGDAFSGLADKV                    R+   T             RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVY TLLSDKCQ+ E  +E+  +++  +       +   +P       G  R +   + RG+G
Sbjct:  357 GVPSTTEASLSSRWEAGLESAASPLLSFLQGMGAQHLCVRVVAGMMALPPPSAVEVLGDAFSGLADKV-------------------GRKHTGT-------------RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYGTLLSDKCQKVEPMNEQRTRKISSASRLSPSSRTTRAPGRSMAKGGRWRRLLKEARRGQG 649          
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A8K1CNA7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNA7_PYTOL)

HSP 1 Score: 145 bits (365), Expect = 1.520e-34
Identity = 101/301 (33.55%), Postives = 152/301 (50.50%), Query Frame = 1
Query:   76 LSFLQGMGAQHLCVRVVAGMMALPPPSAVEVLGDAFSGLADKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSS--DDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLP---CVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYRTLLSDKCQEEEEDSEEELKRLEDSLEALAILKDYTSPWPLDGEGRPVTAVSERGE 963
            +SFL    A+ L +RV+  M  +P   A+ V+      +   V +   +D  LA+G ML M  + A+++FRR I   +   D+ R + LA +G  AARAW     LHQC+E+E ++ WWH L  L I  D++ F    R     EY ++LVP LLE+S  D    LEF   Y +  ++P L+YV+  L +P     +P    YQ+RI  VL  +H     R++  +L T   +   DY+RL FV++ LL       E  S  E + +E  +E L +LK   +      E + + A  E GE
Sbjct: 1385 VSFLVENNAELLSLRVIMSMRCVPE-DALTVVHTQVGKMLSTVYQSQRIDNLLALGLMLTMGQKDAFNSFRRQISRENVAKDFNRFQQLAKIGSDAARAWQQIAFLHQCVELEGNARWWHYLKLLDIECDHKAFQSERRDH---EYIRNLVPKLLEKSNYDYYTILEFTRHYQIDNSYPALVYVEALLLMPPEPSATP-SFEYQDRIVGVLEDIHE---QRLVAMLLRTIPQLQGTDYDRLLFVFQLLL-------EHTSYREKEEVERRMEILHVLKALAAS-----EHKLIAASEEEGE 1665          
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A2D4CBX0_PYTIN (Rod_C domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBX0_PYTIN)

HSP 1 Score: 141 bits (356), Expect = 1.910e-33
Identity = 91/279 (32.62%), Postives = 148/279 (53.05%), Query Frame = 1
Query:   76 LSFLQGMGAQHLCVRVVAGMMALPPPSAVEVLGDAFSGLADKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSS--DDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYRTLLSDKCQEEEEDSEEELKRLEDSLEALAILKDYTS 906
            +S+L    A  L ++V+  M  +P   A+ V+      L   + +   +D  LA+G MLA+  R+A++ FRR I   +   D+ R + LA +G  AARAW     LHQC+E+E ++ WWH L  LGI  D++ F +++R  +   Y + LVP LL +S  D    LEF   Y + ++FP L+YV+  L  P  S   + YQ+++  V+  +H     R++  +L+T   +   DY RL F+++ LL       E+ S  E   +E  +E L +LK + +
Sbjct:   42 VSYLVEHNADLLSLQVMLXMRHIPE-DAINVIQTQLGKLLSTIFQSEKIDNHLALGLMLALEQREAFNGFRRQISRENVAKDFNRFQQLARIGADAARAWQQIAFLHQCVELEGNARWWHYLKLLGIQCDHKAF-QSERRDL--NYIRQLVPTLLVKSNFDYYTILEFTRHYQIDDSFPALVYVEALLVNPSAST-GLEYQDKVAGVIDDIHE---QRLVTLLLKTLPTVPGTDYSRLLFIFQLLL-------EQTSYPEKDEVERRMEVLHVLKAFAA 305          
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A507EAF1_9FUNG (Rod_C domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EAF1_9FUNG)

HSP 1 Score: 112 bits (280), Expect = 2.110e-23
Identity = 68/212 (32.08%), Postives = 106/212 (50.00%), Query Frame = 1
Query:  175 DAFSGLADKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHML-ETPGMICDRDYERLAFVYRTLL 807
            D    L   VM    +D  LA+G ++AMP +QA++ ++  +  +  +Y R+  +AG+G+  A AW        C ++  ++ WWH L  LGI FD   F     +   G +Q+ +VP LL R+G D+  ALEF   Y + + F  + YV    GL   +  D  YQ R+  +L  V  V   RML  ++ E    +   DYER+ F+   +L
Sbjct: 1565 DTLGRLLASVMSSRTIDQKLAVGCLVAMPLKQAFEAYKAGMSTTGQEYSRVLRIAGIGIAVASAWKQRTFRISCEDLAANAKWWHQLRLLGIPFDKDMFKYRTET---GGHQRRVVPELLHRTGFDILTALEFARSYDIEDDFVIIEYVK---GLILTASDDSDYQSRVAGILEDV--VNKERMLAALVNECLLRVSSYDYERIQFIATQIL 1768          
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A4P9YCU7_ROZAC (Uncharacterized protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YCU7_ROZAC)

HSP 1 Score: 99.4 bits (246), Expect = 4.560e-20
Identity = 46/145 (31.72%), Postives = 77/145 (53.10%), Query Frame = 1
Query:  199 KVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQL 633
            KV  F  +DC +A+  M+++P   A++ FR  +    +DY RL  LA +GM     W+       C ++E++  WW+ L  L I FDN  F    R+   GEYQK+L+P +LE+S  D+    ++CE + + + F    ++   +
Sbjct:  132 KVFSFKELDCEVAVSLMISLPVETAFNLFRGGLSTIGNDYLRLIKLASIGMACGNLWNQRSFFVDCQQLEKNGIWWYHLNLLEIPFDNVKF----RTSKFGEYQKTLIPMILEKSDLDISSVKDYCECFDINKDFAYFEFIQQSI 272          
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A075AYK9_ROZAC (Uncharacterized protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AYK9_ROZAC)

HSP 1 Score: 102 bits (254), Expect = 4.770e-20
Identity = 58/205 (28.29%), Postives = 98/205 (47.80%), Query Frame = 1
Query:  199 KVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHML--ETPGMICDRDYERLAFVYRTLL 807
            KV  F  +DC +A+  M+++P   A++ FR  +    +DY RL  LA +GM     W+       C ++E++  WW+ L  L I FDN  F    R+   GEYQK+L+P +LE+S  D+    ++CE + + + F    ++             +  +E    VL  +  +     L+ +L  E    I   DY ++ FV + +L
Sbjct: 1014 KVFSFKELDCEVAVSLMISLPVETAFNLFRGGLSTIGNDYLRLIKLASIGMACGNLWNQRSFFVDCQQLEKNGIWWYHLNVLEIPFDNVKF----RTSKFGEYQKTLIPMILEKSDLDISSVKDYCECFDINKDFAYFEFIQQS----------IKKREFKGNVLNVIEEIKNKEKLKDLLLNEILNNISPFDYSKIEFVLKLIL 1204          
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A1Y1YCH8_9FUNG (Rod_C domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YCH8_9FUNG)

HSP 1 Score: 101 bits (252), Expect = 8.950e-20
Identity = 61/205 (29.76%), Postives = 101/205 (49.27%), Query Frame = 1
Query:  199 KVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHML--ETPGMICDRDYERLAFVYRTLL 807
            KV+   ++D  LA+GY +++P  QA+  ++  +     DY RL   A +G+  A  W+       C ++  ++ WWH L  L I FD+  F    R+    EYQ+ LVP L+E++  D+   LEF   Y + + +  L YV     L    P + SYQ ++  V   V  +     L H+L  +    +   DYERL F+++ ++
Sbjct: 1455 KVLSSRYIDNLLALGYTISLPLEQAFTAYKAGLATVGSDYHRLIKFAAIGIGCATVWEQRGFYVNCKQLGANARWWHQLKILDIPFDDAQF----RASKHSEYQRKLVPLLMEKTNLDILTVLEFGRAYDLEDDYSYLEYVRK---LILCGPEE-SYQSQVVGV---VDDIVNKEKLLHLLISQCVPRVSPYDYERLQFIFQQII 1648          
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: A0A507FKD6_9FUNG (Rod_C domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FKD6_9FUNG)

HSP 1 Score: 96.3 bits (238), Expect = 5.710e-18
Identity = 57/205 (27.80%), Postives = 100/205 (48.78%), Query Frame = 1
Query:  196 DKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVS-YQERITEVLPSVHGVFLSRMLRHMLETPGMICDRDYERLAFVYRTLL 807
            + +     +D  LA G ++ +P ++A+++F+  +  +  DY RL   A +G+ A+ AW+       C  + +++ WWH L  L ++F+   +    +    GEYQ+ LVPALLE++G D+  +L+F   Y + + F    Y+   L     S HD + Y+ RI  +L  V        L H  E         YE++ F+   +L
Sbjct: 1532 ENIFSSRTIDQNLAFGGLMVIPPQEAFESFKFGLSTTGKDYDRLLKFAAIGIAASLAWNQRTFQVTCETLAKNAKWWHQLHLLNVSFNMDQY----KLSTSGEYQRRLVPALLEKTGLDIMTSLDFARTYNIEDDFVIFEYITQLLS----SDHDSNGYKYRIAGILDDVDNKPRLATLLH--EVCAKCSPYKYEKIGFIIDQIL 1726          
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Match: F4PEL7_BATDJ (Rod_C domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4PEL7_BATDJ)

HSP 1 Score: 82.8 bits (203), Expect = 1.690e-13
Identity = 41/138 (29.71%), Postives = 71/138 (51.45%), Query Frame = 1
Query:  178 AFSGLADKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGV 591
            A   LA +++    +D    +  +L++PT+ A+D+F+  +  +  D+GRL  +A VG  A   W  HD    C  +   + WW  L  L I FD   +    ++ V G+YQ+ L+P +L+++  DL   L F + Y +
Sbjct: 1369 ALKNLATQMLSAKVIDKHYTLACLLSLPTKIAFDSFKSGMATTGKDFGRLERVAKVGAMAGLVWSQHDFQANCQRLAVHAGWWQELQVLEIPFDQAKY----QASVNGDYQRELIPHILQKTDGDLETTLAFSQYYHI 1502          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8374.19741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LSU3_ECTSI1.340e-21995.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KS52_9PHAE5.640e-15174.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1CNA7_PYTOL1.520e-3433.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CBX0_PYTIN1.910e-3332.62Rod_C domain-containing protein n=1 Tax=Pythium in... [more]
A0A507EAF1_9FUNG2.110e-2332.08Rod_C domain-containing protein n=1 Tax=Powellomyc... [more]
A0A4P9YCU7_ROZAC4.560e-2031.72Uncharacterized protein n=1 Tax=Rozella allomycis ... [more]
A0A075AYK9_ROZAC4.770e-2028.29Uncharacterized protein n=1 Tax=Rozella allomycis ... [more]
A0A1Y1YCH8_9FUNG8.950e-2029.76Rod_C domain-containing protein n=1 Tax=Basidiobol... [more]
A0A507FKD6_9FUNG5.710e-1827.80Rod_C domain-containing protein n=1 Tax=Chytriomyc... [more]
F4PEL7_BATDJ1.690e-1329.71Rod_C domain-containing protein n=2 Tax=Batrachoch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8374contigEcto-sp13_S_contig8374:2117..6831 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score142.9
Seed ortholog evalue2.8e-31
Seed eggNOG ortholog4787.PITG_16511T0
Preferred nameKNTC1
Model size1055
KEGG koko:K11577
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000075,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000777,GO:0000779,GO:0000793,GO:0000819,GO:0000922,GO:0000940,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005794,GO:0005795,GO:0005819,GO:0005828,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005886,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007030,GO:0007049,GO:0007059,GO:0007079,GO:0007088,GO:0007093,GO:0007094,GO:0007096,GO:0007346,GO:0008104,GO:0008150,GO:0009987,GO:0010256,GO:0010564,GO:0010638,GO:0010639,GO:0010695,GO:0010696,GO:0010948,GO:0010965,GO:0012505,GO:0015629,GO:0015630,GO:0016020,GO:0016043,GO:0017016,GO:0017137,GO:0019899,GO:0019904,GO:0022402,GO:0022607,GO:0030071,GO:0031267,GO:0031334,GO:0031577,GO:0031984,GO:0032879,GO:0032880,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033365,GO:0034501,GO:0034502,GO:0034508,GO:0034613,GO:0034622,GO:0036063,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045786,GO:0045787,GO:0045839,GO:0045840,GO:0045841,GO:0045930,GO:0045931,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050000,GO:0050789,GO:0050794,GO:0051020,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051233,GO:0051234,GO:0051276,GO:0051303,GO:0051305,GO:0051382,GO:0051383,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051726,GO:0051781,GO:0051783,GO:0051784,GO:0051785,GO:0051983,GO:0051984,GO:0051985,GO:0051988,GO:0060341,GO:0062033,GO:0065003,GO:0065004,GO:0065007,GO:0070507,GO:0070727,GO:0070925,GO:0071173,GO:0071174,GO:0071459,GO:0071824,GO:0071840,GO:0071944,GO:0090068,GO:0090230,GO:0090231,GO:0090232,GO:0090234,GO:0090235,GO:0090266,GO:0090267,GO:0090268,GO:0098687,GO:0098791,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140014,GO:1901970,GO:1901976,GO:1901978,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902115,GO:1902117,GO:1902423,GO:1903047,GO:1903394,GO:1903504,GO:1903827,GO:1903829,GO:1905340,GO:1905342,GO:1905561,GO:1905818,GO:1905819,GO:1905820,GO:1990423,GO:2000816,GO:2001251,GO:2001252
Exons6
EggNOG free text desc.regulation of mitotic cell cycle
EggNOG OGs3QGAW@4776,KOG4256@1,KOG4256@2759
Cds size1053
COG Functional cat.D
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8374.19741.1prot_Ecto-sp13_S_contig8374.19741.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8374 2118..6831 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464107.6850154-CDS-Ecto-sp13_S_contig8374:2117..23481681464107.6850154-CDS-Ecto-sp13_S_contig8374:2117..2348Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8374 2118..2348 -
1681464107.706605-CDS-Ecto-sp13_S_contig8374:3062..32121681464107.706605-CDS-Ecto-sp13_S_contig8374:3062..3212Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8374 3063..3212 -
1681464107.7213786-CDS-Ecto-sp13_S_contig8374:4323..45281681464107.7213786-CDS-Ecto-sp13_S_contig8374:4323..4528Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8374 4324..4528 -
1681464107.733842-CDS-Ecto-sp13_S_contig8374:5376..55201681464107.733842-CDS-Ecto-sp13_S_contig8374:5376..5520Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8374 5377..5520 -
1681464107.7447536-CDS-Ecto-sp13_S_contig8374:6166..62881681464107.7447536-CDS-Ecto-sp13_S_contig8374:6166..6288Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8374 6167..6288 -
1681464107.7544744-CDS-Ecto-sp13_S_contig8374:6630..68311681464107.7544744-CDS-Ecto-sp13_S_contig8374:6630..6831Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8374 6631..6831 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8374.19741.1

>prot_Ecto-sp13_S_contig8374.19741.1 ID=prot_Ecto-sp13_S_contig8374.19741.1|Name=mRNA_Ecto-sp13_S_contig8374.19741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=351bp
GVPSTTEASLSSRWEAGLERAASPLLSFLQGMGAQHLCVRVVAGMMALPP
PSAVEVLGDAFSGLADKVMEFNHVDCPLAIGYMLAMPTRQAYDTFRRIIR
YSSDDYGRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGI
TFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEA
FPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETP
GMICDRDYERLAFVYRTLLSDKCQEEEEDSEEELKRLEDSLEALAILKDY
TSPWPLDGEGRPVTAVSERGEGGARGGARGEVDVRSSTAPPTTVVCPASE
A
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mRNA from alignment at Ecto-sp13_S_contig8374:2117..6831-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8374.19741.1 ID=mRNA_Ecto-sp13_S_contig8374.19741.1|Name=mRNA_Ecto-sp13_S_contig8374.19741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4715bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8374:2117..6831- (Ectocarpus species13 EcNAP12_S_4_19m)
GGAGTTCCATCTACGACTGAGGCCTCGTTATCATCTCGGTGGGAGGCGGG GCTGGAACGCGCGGCGTCCCCCCTCCTGTCCTTCCTCCAGGGGATGGGGG CCCAGCACCTGTGCGTGAGGGTAGTCGCCGGCATGATGGCGTTGCCCCCT CCCTCGGCGGTGGAGGTGCTTGGCGACGCTTTCTCGGGCTTGGCGGACAA GGTGGGACGCTGGTATGTATGGGTGTGAATACCGCCGTGCCACGGCTTCG CGGTACAGCCGTGGCCCCGACATATGAGGGGGGTATGACAAAGCTCTTTT ATGTCGGAGCCGCGTTTTTTACCCGAATACGGGGGTACCCAGCTACTCCT ACACTTGTAGGAGGTCGAGTCCATGACAAAAACAACCGATTTTCGACCCA CATGAAACCTCTGTTATTAGGTACCAGGTACCCTTCTACTCTCGCGGCGT GAGTGGACGTGGAACACACAGCGGCGCTCTCTTTGTCTCCCTTTGCCATG CTATTGTACTGCTCTTGTTATTTTGGGGGAAAACACCTGAAAGGTGATGG AGTTTAACCACGTCGACTGCCCGCTGGCGATCGGCTACATGCTGGCCATG CCCACGAGACAAGCGTACGACACCTTCCGACGGATTATTCGCTACTCCAG CGACGACTACGGAAGGTGAATGAACGACTGTGAATCGTTCTTTACGTAAG AAATTTGGTTTCGTGCAACAGGTACGTATCTCGTGTGTATCAACGTTTTA GTTGCCTTTGTTTCTCAAGTGTTCTTCGTGATTTTGCCGTCGAAAACCTT GGACGTTTGTGTTTGGACCGATTTTACCAGAAATATCCCCGTCCTTTCTC ACCTTTTTTTCTCTTTGTCGTGCGCTGGTTACCCCCTCGGGTCCGCTGGG TCATCATGTGTAGCCCCGTTTTGTAGCATGAGCTGCCCGTCAGCCTCTAC CCCCGTTCCCCCCCGCTTGGTGATGTGCCAACCTGGTCCGGTGAAAACCC GGCGTGCTCCGTCCCGTCTTTGTAGAGATTCGAGGTCAATGGTCTAGCGA CTAACGTAAGCACGGCAATGACTACAACCCCACCCGTCTGGATTAACCTT CAGTCAAAACGATAGCACACCGCGCCCTCATGCACAACCTCCTCTCCTCC CCTTCCCGTTAGCCCACCCGGTACCCCCCGTACCACCTGGCCTGCGTTGC CTCAATATGCGTGAACCGAACTGGTTCGGTTCTTTGACCGCTGTACGCAC GGACCTCTTCCGTCCCACTCACGCGAATCCGCGTCGTCCCTCTTCGCTCA ACGCGGCGAAGATTGCGCATCCTGGCGGGAGTCGGCATGTACGCGGCCCG CGCCTGGGACAACCACGACCTCCTGCACCAGTGCATGGAGGTGGAGCGGG ACTCGCACTGGTGGCACGTGCTCACGAGCCTCGGCATCACCTTCGACAAC CGGGGGTAAGGACGGGCTACAGAATACAGTGGCGGTGCCTTCGGTCTTAG AGTGGGTTCGGGACAAGCGAACAACACTCTATTTCAGCACATCCGGTTCT CTCTTAGACTGTACCACTAGTGTGTGATGTGTGCAGTTCTGACGGTCGGG ACGAGCGAAAAGCTCTCTCTTTTCAATCCGATCATCTCTTACAAATCTCT CTTAAAACCATAGCCGCTGCTGAAAGCGATGTTTGGTTGTCGTGGTTTGC GGCGGCGGTGGTGGCGGTGGTCGTTGTCTTGTTTTCGTTTCGGTTGTTTC GTCGTGTTTGTGTTCATGTTTTTGGTGTTGGTGTTGGTGCTAGTGCAATG GTTCTTGTTGTAATGGTTGTTGTTGTTGCTGCTGCTGTTGCTGCTGCTGC TGCTGCTGCTGCTGCTGCTGCTGCTGCGTTGGGTCGAATTGAAACTCCGC TGTCACGTTGACGCGAGAAGAGAAGGGAGAAGCGAGGGGGGGGGTTTTTC TTGGAACTTTCCGACCATTCCACCCCCCACGACTCCTACACCAGTACCGC AGCGTCTGAACAGGTCCTTTCGGTTCCAGGGTTTGTCAACAAGCTCCATC CCCTGGGGTATCCCACGGAACCCCCCGCCCCCTCCCTCGTTGCAGGGGAC AACAACAGGCTGCATCCAGTATAAATAGCAACAATAACTGCGTGTATTAT TGCTTGACGACGACAGCACGAACCCTCTATTGTGCAAGAGGCCCGCGCTG CACTACGTCGCCCCTCCCCGCACCCCGACCACTGCTGCCAACCCACCCAC GCCCTTCCCGCTGCCGTTGCCGTTGCACCCTTGCCCCCTTGCTTGCGGGA CAGCTTCTCGAGGGCGGACAGGTCGCAGGTGCCGGGGGAGTACCAGAAGT CGCTCGTGCCGGCTTTGCTGGAGAGGTCGGGGTGCGACCTCGGTCTCGCC CTGGAGTTCTGCGAGCGCTACGGCGTGGGGGAGGCGTTCCCCTGCCTGCT CTACGTGGACAACCAGCTCGGGCTGCCGTGTGTTTCCCCGCATGACGTGT CCTATCAGGTCTGTTTTCTCTTGCCTTTTTGTAATAACGTTGATTCGTTC CATCTCTCTCTCGGTTGCATGTGTTGGGTGAGGAGAAGGGGCCTCAATGC GCTGGATGGTCATCGCTAAACACCGCATCTAACTCAAAACGTACCGTTGT TGGCCGTTGCTGTACCGTTTCTTGGCCGTTGTTGTAACGTTTTCGGTCTT GTTGTACCGTTTCTTGGCCTTACTGCTGTCCGTTCCATGGTCTTGTTGCA CGGGTTCTTGGCCTTGCTGTACGGTGTCTTGGCCGGAACTGTTTTCAACC TTGCACGGTTTCTTGGCCTTGTTGTTCCGTTTCTTGGCCCTTTCGTACTG TTCATGACCATCGCATCGAGCCATATTGCCACCGGACGTATTGATTCAAA CCTATCATCTGTAGTGTTGTAAATATACTCTATCCCTCAGGCGTTATTGG TTGTGTGTTGTCTTAGGGGGCGCGCGGGGGGGGGGGGGGGGGGTGTTTTT ACGTTTTTGGCGCGGGGGGGGGGTTTCTTTGTTGTGCCCCCCCCCTTTTT TTTTTTCCTTTTTGTCTTTCCTTCTTTNNNNNNNNNNTTTGTGTTTGAGT TTTTATTTTTTGCTCTTTGTTGGGGGTTTTTGGGTGGTGGGTTTGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGTATGTTTACCGTTTTGGCGCTGCG GTGGTGTCTCATCGTTGTAGCCCGCACCGTTTTTCGTATCCTCTTGTGCA TACCTGACTTGGTTGACACGTGATGATGCCAACAACACTTGAAACACTAG CGTGGAAAGTGAAACACTACATGGACAGCAGCCAAACCCGACAGGAACAG TTTTGTCATCCTCTGACGACACTTGTGTTGGCCCGTGCGTTCGCCTTTAT TTTTAGCAACATACATACTCGGCTGGCCGATTGAAAGACGCAGTCTCCGT GAGGTCGAGAACAGAAAATGCTTCTGTGTGTAGTGTCAAGACGTCAGGAT CAGTTCGGTTGAAACTAGAAATTTCTTGTGTGTGTGTCAACGAAGACGTC AGTCTCCGTAAGGGTGAAAACGGGAGATGCTAGTTACTGTGTTTGCTATT TTTGTTTTTCTTTACGCAGGAGAGAATCACGGAGGTGCTTCCGTCGGTGC ACGGTGTGTTTTTGTCGAGGATGCTAAGGCATATGCTGGAAACCCCGGGG ATGATCTGCGACCGGGACTACGAGCGCCTCGCCTTCGTGTACCGCACTCT CCTGTCGGACAAGTGCCAGGTGTGAATTGAATCGGTGATTATTTCATCGA GAATCGTTTTATGTGGAAGTGCACGCACAGACGTCCCCTGCCTTGGTATG TGGTCCCTAAAACACCAACATTTGAACAAGATACAGTAATACAGTCAAAA TATCCTATTAAACGCACAAACACGCACGTTTGTGTACCATTAAATTAGAT TAAATAGTCATACAAGTATGGTTGTTTACCATCAAACCAAATTAAGTGAT CACACACGTATGTTTATCTAGGGGACGGGACAATTTGTAGCGACTTATTT TTGCTTTTTCGGAATGGTTTTTCCTATCTCATCGATCAGTGCTAGCCATG TACTGTGGGAGTGAGAGTTTTGGAAGCCTGTCCCCGTTGTCGGGGGTGAG ATGAATTAGGCTTTCTTGATGTTTCTTCTGTTTTCTTAGCCTGGGGGCGG TGGGGCGCATGCTCCTCTCGCCTCTCGAATATGTCTGACAAAAAAGTCAG AAACTTGAACGCATGAACGAGCAACGGACACGTACCAATAGCTCTTCAGG TATGTACTACGAGATCAGGGGAAAAATCCCAGCGACAGCATGTGGCAAGC GCCCACTCCGCCACCCCTTGCTCGCCGAGTGTGTTCGATACAACGTGACA AAACAAAACACGCTACCGAGACAGCCTTTGACAAGCGCTCACACACAACG TGGAATACAATAAACACGGATGATTCAACGCAGGAAGAGGAGGAAGACTC TGAAGAAGAGTTGAAGCGCCTGGAGGACAGCCTCGAGGCTCTCGCCATCC TCAAGGACTACACGAGCCCCTGGCCGCTCGACGGCGAAGGGCGGCCGGTG ACGGCGGTTTCTGAACGAGGCGAGGGCGGGGCAAGGGGCGGGGCAAGGGG CGAAGTGGATGTTCGATCATCCACGGCGCCCCCGACTACCGTCGTGTGTC CCGCGAGCGAGGCGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8374:2117..6831-

>mRNA_Ecto-sp13_S_contig8374.19741.1 ID=mRNA_Ecto-sp13_S_contig8374.19741.1|Name=mRNA_Ecto-sp13_S_contig8374.19741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1053bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8374:2117..6831- (Ectocarpus species13 EcNAP12_S_4_19m)
GGAGTTCCATCTACGACTGAGGCCTCGTTATCATCTCGGTGGGAGGCGGG
GCTGGAACGCGCGGCGTCCCCCCTCCTGTCCTTCCTCCAGGGGATGGGGG
CCCAGCACCTGTGCGTGAGGGTAGTCGCCGGCATGATGGCGTTGCCCCCT
CCCTCGGCGGTGGAGGTGCTTGGCGACGCTTTCTCGGGCTTGGCGGACAA
GGTGATGGAGTTTAACCACGTCGACTGCCCGCTGGCGATCGGCTACATGC
TGGCCATGCCCACGAGACAAGCGTACGACACCTTCCGACGGATTATTCGC
TACTCCAGCGACGACTACGGAAGATTGCGCATCCTGGCGGGAGTCGGCAT
GTACGCGGCCCGCGCCTGGGACAACCACGACCTCCTGCACCAGTGCATGG
AGGTGGAGCGGGACTCGCACTGGTGGCACGTGCTCACGAGCCTCGGCATC
ACCTTCGACAACCGGGGCTTCTCGAGGGCGGACAGGTCGCAGGTGCCGGG
GGAGTACCAGAAGTCGCTCGTGCCGGCTTTGCTGGAGAGGTCGGGGTGCG
ACCTCGGTCTCGCCCTGGAGTTCTGCGAGCGCTACGGCGTGGGGGAGGCG
TTCCCCTGCCTGCTCTACGTGGACAACCAGCTCGGGCTGCCGTGTGTTTC
CCCGCATGACGTGTCCTATCAGGAGAGAATCACGGAGGTGCTTCCGTCGG
TGCACGGTGTGTTTTTGTCGAGGATGCTAAGGCATATGCTGGAAACCCCG
GGGATGATCTGCGACCGGGACTACGAGCGCCTCGCCTTCGTGTACCGCAC
TCTCCTGTCGGACAAGTGCCAGGAAGAGGAGGAAGACTCTGAAGAAGAGT
TGAAGCGCCTGGAGGACAGCCTCGAGGCTCTCGCCATCCTCAAGGACTAC
ACGAGCCCCTGGCCGCTCGACGGCGAAGGGCGGCCGGTGACGGCGGTTTC
TGAACGAGGCGAGGGCGGGGCAAGGGGCGGGGCAAGGGGCGAAGTGGATG
TTCGATCATCCACGGCGCCCCCGACTACCGTCGTGTGTCCCGCGAGCGAG
GCG
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