mRNA_Ecto-sp13_S_contig83409.19704.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: A0A3B0YBJ9_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0YBJ9_9ZZZZ) HSP 1 Score: 70.5 bits (171), Expect = 4.390e-14 Identity = 32/45 (71.11%), Postives = 33/45 (73.33%), Query Frame = 2
Query: 2 PYWSCSRWGLPCHLCHQRRGALLPHPFILTCQTRLVRRFAFCGTF 136
P WSCS WGLPCH C QRRGALLPH F LT L RR+ FCGTF
Sbjct: 43 PIWSCSGWGLPCHRCCQRRGALLPHHFTLTGAYAL-RRYIFCGTF 86
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: A0A382B3P2_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382B3P2_9ZZZZ) HSP 1 Score: 66.6 bits (161), Expect = 5.980e-13 Identity = 34/48 (70.83%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 1 SLLVLLPVGFTLPSLSPETRCALTAPFHPYLSDTSG--QAVCFLWHFP 138
S LVLL VGFTLP + P TRCALTAPFHPY DT AV FLWHFP
Sbjct: 23 SYLVLLRVGFTLPFVLPPTRCALTAPFHPYRPDTRKCQSAVYFLWHFP 70
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: A0A509MBY8_9ACTN (Uncharacterized protein n=3 Tax=Propionibacterium freudenreichii TaxID=1744 RepID=A0A509MBY8_9ACTN) HSP 1 Score: 55.5 bits (132), Expect = 7.800e-8 Identity = 28/46 (60.87%), Postives = 31/46 (67.39%), Query Frame = 1
Query: 1 SLLVLLPVGFTLPSLSPETRCALTAPFHPYLSDTSGQAVCFLWHFP 138
S LVLL VGF LP+ SP R +LT PFHPY +AVCFLWH P
Sbjct: 63 SFLVLLRVGFALPTQSPAPRWSLTPPFHPY---PIARAVCFLWHCP 105
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: A0A177G803_9PROT (Esterase/lipase n=2 Tax=Acetobacter malorum TaxID=178901 RepID=A0A177G803_9PROT) HSP 1 Score: 55.5 bits (132), Expect = 1.070e-7 Identity = 27/46 (58.70%), Postives = 29/46 (63.04%), Query Frame = 2
Query: 2 PYWSCSRWGLPCHLCHQRRGALLPHPFILTCQTRLVRRFAFCGTFP 139
P SCSRWGLPC LC+QR GALLPH F LT F+F FP
Sbjct: 24 PIRSCSRWGLPCLLCYQRSGALLPHRFTLT--------FSFVPWFP 61
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: A4BFS3_9GAMM (Uncharacterized protein n=1 Tax=Reinekea blandensis MED297 TaxID=314283 RepID=A4BFS3_9GAMM) HSP 1 Score: 52.0 bits (123), Expect = 1.200e-7 Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 1
Query: 7 LVLLPVGFTLPSLSPETRCALTAPFHPYLSDTSGQAVCFLWHFP 138
+VLL VGFT+P+L P +RCALTAPFHPY AV L H+P
Sbjct: 1 MVLLQVGFTMPTLLPVSRCALTAPFHPY--QARSLAVYSLLHWP 42
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: A0A1E3GPF8_9GAMM (Uncharacterized protein n=1 Tax=Methylophaga muralis TaxID=291169 RepID=A0A1E3GPF8_9GAMM) HSP 1 Score: 53.5 bits (127), Expect = 1.270e-7 Identity = 26/34 (76.47%), Postives = 27/34 (79.41%), Query Frame = 1
Query: 7 LVLLPVGFTLPSLSPETRCALTAPFHPYLSDTSG 108
LVLL VGFT+P L PE RCALTAPFHPYL SG
Sbjct: 53 LVLLLVGFTMPLLLPEARCALTAPFHPYLKIHSG 86
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: F8BVL8_AFIC5 (Uncharacterized protein n=1 Tax=Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) TaxID=504832 RepID=F8BVL8_AFIC5) HSP 1 Score: 52.4 bits (124), Expect = 1.670e-7 Identity = 25/42 (59.52%), Postives = 28/42 (66.67%), Query Frame = 1
Query: 10 VLLPVGFTLPSLSPETRCALTAPFHPYLSDTSGQAVCFLWHF 135
VLLPVGF +P PETRCALTAPFHPY + +G W F
Sbjct: 20 VLLPVGFAMPPPLPETRCALTAPFHPYRATLAGA-----WRF 56
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: A0A1B2AFP3_9SPHN (Uncharacterized protein n=1 Tax=Tsuneonella dongtanensis TaxID=692370 RepID=A0A1B2AFP3_9SPHN) HSP 1 Score: 53.9 bits (128), Expect = 2.030e-7 Identity = 31/44 (70.45%), Postives = 33/44 (75.00%), Query Frame = 3
Query: 9 GLAPGGVYPAISVTRDAVRSYRTLSSLPVRHVWSGGLLSVALSL 140
GLAPGGV A VTR VRSYRTLS+LP+ GGLLSVALSL
Sbjct: 72 GLAPGGVCRASPVTRTPVRSYRTLSALPLER---GGLLSVALSL 112
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: Q1YSE1_9GAMM (Uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 TaxID=314287 RepID=Q1YSE1_9GAMM) HSP 1 Score: 50.4 bits (119), Expect = 1.260e-6 Identity = 24/35 (68.57%), Postives = 25/35 (71.43%), Query Frame = 1
Query: 7 LVLLPVGFTLPSLSPETRCALTAPFHPYLSDTSGQ 111
LVLL VGFTLP L P RCALTAPFHPYL +
Sbjct: 48 LVLLRVGFTLPLLLPAARCALTAPFHPYLCSRTNH 82
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: D3NWD1_AZOS1 (Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) TaxID=137722 RepID=D3NWD1_AZOS1) HSP 1 Score: 50.4 bits (119), Expect = 2.410e-6 Identity = 22/31 (70.97%), Postives = 23/31 (74.19%), Query Frame = 2
Query: 2 PYWSCSRWGLPCHLCHQRRGALLPHPFILTC 94
P SCSRWGLPC + RGALLPHPF LTC
Sbjct: 114 PIRSCSRWGLPCRPRCRVRGALLPHPFTLTC 144 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig83409.19704.1 >prot_Ecto-sp13_S_contig83409.19704.1 ID=prot_Ecto-sp13_S_contig83409.19704.1|Name=mRNA_Ecto-sp13_S_contig83409.19704.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp SLLVLLPVGFTLPSLSPETRCALTAPFHPYLSDTSGQAVCFLWHFP*back to top mRNA from alignment at Ecto-sp13_S_contig83409:2..142- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig83409.19704.1 ID=mRNA_Ecto-sp13_S_contig83409.19704.1|Name=mRNA_Ecto-sp13_S_contig83409.19704.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=141bp|location=Sequence derived from alignment at Ecto-sp13_S_contig83409:2..142- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig83409:2..142- >mRNA_Ecto-sp13_S_contig83409.19704.1 ID=mRNA_Ecto-sp13_S_contig83409.19704.1|Name=mRNA_Ecto-sp13_S_contig83409.19704.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=141bp|location=Sequence derived from alignment at Ecto-sp13_S_contig83409:2..142- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |