prot_Ecto-sp13_S_contig83409.19704.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig83409.19704.1
Unique Nameprot_Ecto-sp13_S_contig83409.19704.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: A0A382B3P2_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382B3P2_9ZZZZ)

HSP 1 Score: 66.6 bits (161), Expect = 5.980e-13
Identity = 34/48 (70.83%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 SLLVLLPVGFTLPSLSPETRCALTAPFHPYLSDTSG--QAVCFLWHFP 46
            S LVLL VGFTLP + P TRCALTAPFHPY  DT     AV FLWHFP
Sbjct:   23 SYLVLLRVGFTLPFVLPPTRCALTAPFHPYRPDTRKCQSAVYFLWHFP 70          
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: A0A509MBY8_9ACTN (Uncharacterized protein n=3 Tax=Propionibacterium freudenreichii TaxID=1744 RepID=A0A509MBY8_9ACTN)

HSP 1 Score: 55.5 bits (132), Expect = 7.800e-8
Identity = 28/46 (60.87%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    1 SLLVLLPVGFTLPSLSPETRCALTAPFHPYLSDTSGQAVCFLWHFP 46
            S LVLL VGF LP+ SP  R +LT PFHPY      +AVCFLWH P
Sbjct:   63 SFLVLLRVGFALPTQSPAPRWSLTPPFHPY---PIARAVCFLWHCP 105          
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: A4BFS3_9GAMM (Uncharacterized protein n=1 Tax=Reinekea blandensis MED297 TaxID=314283 RepID=A4BFS3_9GAMM)

HSP 1 Score: 52.0 bits (123), Expect = 1.200e-7
Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    3 LVLLPVGFTLPSLSPETRCALTAPFHPYLSDTSGQAVCFLWHFP 46
            +VLL VGFT+P+L P +RCALTAPFHPY       AV  L H+P
Sbjct:    1 MVLLQVGFTMPTLLPVSRCALTAPFHPY--QARSLAVYSLLHWP 42          
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: A0A1E3GPF8_9GAMM (Uncharacterized protein n=1 Tax=Methylophaga muralis TaxID=291169 RepID=A0A1E3GPF8_9GAMM)

HSP 1 Score: 53.5 bits (127), Expect = 1.270e-7
Identity = 26/34 (76.47%), Postives = 27/34 (79.41%), Query Frame = 0
Query:    3 LVLLPVGFTLPSLSPETRCALTAPFHPYLSDTSG 36
            LVLL VGFT+P L PE RCALTAPFHPYL   SG
Sbjct:   53 LVLLLVGFTMPLLLPEARCALTAPFHPYLKIHSG 86          
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: F8BVL8_AFIC5 (Uncharacterized protein n=1 Tax=Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) TaxID=504832 RepID=F8BVL8_AFIC5)

HSP 1 Score: 52.4 bits (124), Expect = 1.670e-7
Identity = 25/42 (59.52%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    4 VLLPVGFTLPSLSPETRCALTAPFHPYLSDTSGQAVCFLWHF 45
            VLLPVGF +P   PETRCALTAPFHPY +  +G      W F
Sbjct:   20 VLLPVGFAMPPPLPETRCALTAPFHPYRATLAGA-----WRF 56          
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: Q1YSE1_9GAMM (Uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 TaxID=314287 RepID=Q1YSE1_9GAMM)

HSP 1 Score: 50.4 bits (119), Expect = 1.260e-6
Identity = 24/35 (68.57%), Postives = 25/35 (71.43%), Query Frame = 0
Query:    3 LVLLPVGFTLPSLSPETRCALTAPFHPYLSDTSGQ 37
            LVLL VGFTLP L P  RCALTAPFHPYL   +  
Sbjct:   48 LVLLRVGFTLPLLLPAARCALTAPFHPYLCSRTNH 82          
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: A0A1Z5H7E8_9GAMM (Uncharacterized protein n=2 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A1Z5H7E8_9GAMM)

HSP 1 Score: 48.9 bits (115), Expect = 3.430e-6
Identity = 22/28 (78.57%), Postives = 24/28 (85.71%), Query Frame = 0
Query:    3 LVLLPVGFTLPSLSPETRCALTAPFHPY 30
            L+LL VGFT+P L P TRCALTAPFHPY
Sbjct:   19 LILLQVGFTMPLLLPVTRCALTAPFHPY 46          
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: A0A1H6HH21_MAGFU (Uncharacterized protein n=1 Tax=Magnetospirillum fulvum TaxID=1082 RepID=A0A1H6HH21_MAGFU)

HSP 1 Score: 50.1 bits (118), Expect = 6.550e-6
Identity = 28/46 (60.87%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    3 LVLLPVGFTLPSLSPETRCALTAPFHPYLS-DTSG-QAVCFLWHFP 46
            LVLLPVGF LP   P  RCALTAPFHPYL+ + SG +   F   FP
Sbjct:   46 LVLLPVGFALPPPLPGARCALTAPFHPYLTPERSGDRRFTFCGTFP 91          
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Match: G4RG04_PELHB (Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain DSM 22347 / JCM 15775 / CGMCC 1.7692 / B2) TaxID=1082931 RepID=G4RG04_PELHB)

HSP 1 Score: 49.7 bits (117), Expect = 7.410e-6
Identity = 23/33 (69.70%), Postives = 25/33 (75.76%), Query Frame = 0
Query:    4 VLLPVGFTLPSLSPETRCALTAPFHPYLSDTSG 36
            VLLPVGFT+  L P TRCALTAPFHPY   + G
Sbjct:  117 VLLPVGFTVRPLLPGTRCALTAPFHPYPGQSRG 149          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig83409.19704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A382B3P2_9ZZZZ5.980e-1370.83Uncharacterized protein n=1 Tax=marine metagenome ... [more]
A0A509MBY8_9ACTN7.800e-860.87Uncharacterized protein n=3 Tax=Propionibacterium ... [more]
A4BFS3_9GAMM1.200e-759.09Uncharacterized protein n=1 Tax=Reinekea blandensi... [more]
A0A1E3GPF8_9GAMM1.270e-776.47Uncharacterized protein n=1 Tax=Methylophaga mural... [more]
F8BVL8_AFIC51.670e-759.52Uncharacterized protein n=1 Tax=Afipia carboxidovo... [more]
Q1YSE1_9GAMM1.260e-668.57Uncharacterized protein n=1 Tax=gamma proteobacter... [more]
A0A1Z5H7E8_9GAMM3.430e-678.57Uncharacterized protein n=2 Tax=unclassified Gamma... [more]
A0A1H6HH21_MAGFU6.550e-660.87Uncharacterized protein n=1 Tax=Magnetospirillum f... [more]
G4RG04_PELHB7.410e-669.70Uncharacterized protein n=1 Tax=Pelagibacterium ha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig83409contigEcto-sp13_S_contig83409:2..142 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig83409.19704.1mRNA_Ecto-sp13_S_contig83409.19704.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig83409 2..142 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig83409.19704.1 ID=prot_Ecto-sp13_S_contig83409.19704.1|Name=mRNA_Ecto-sp13_S_contig83409.19704.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
SLLVLLPVGFTLPSLSPETRCALTAPFHPYLSDTSGQAVCFLWHFP*
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