mRNA_Ecto-sp13_S_contig8336.19699.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8336.19699.1
Unique NamemRNA_Ecto-sp13_S_contig8336.19699.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8336.19699.1 vs. uniprot
Match: D7FMA9_ECTSI (Dehydrogenase/reductase SDR family member 13 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA9_ECTSI)

HSP 1 Score: 548 bits (1413), Expect = 1.280e-190
Identity = 278/300 (92.67%), Postives = 283/300 (94.33%), Query Frame = 1
Query:    1 QCDAACEDIRRRVPGAALDSLTLDLSSVESIRGFVETFHKTGLPLHVLVNNAGIIPGKPGTIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAA-PASAFGHGDREQSRENVPGTGPSPRIVNVGSRLEKRGSLWAAAVSDGGRDPAVPPGTRWFHPPPGKKHDAFGLYASSKLCNMLFTFELDRRLETARSGGRRLVTANIVTPGIVNTKLGDGTVSPWVAWAGGPLKAALMRTADKGAETVVWAATSPEIEEIGGGKFFGDKKEVPCSDASRDEDLARQLWDATEQAVGLEESERVV 897
            +C AACEDIRRRVPGAALD+L+LDLSSVESIRGFVETFHKTGLPLHVLVNNAG    KPGTIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAA PASA GHGDREQS ENVPGTGPS RIVNVGSRLEKRG+LWAAAVSDGG D AVPPGTRWF PPP KKHDAFGLY SSKLCNMLFTFELDRRLE ARSGGRRLVTANIVTPGIVNTKLGDGTVSPWVAWAG PLKAALMRTADKGAETVVWAATSPEIEEIGGGKFFGDK EVPCSDASRDEDLARQLW+ATEQAVGLEESERVV
Sbjct:   83 KCAAACEDIRRRVPGAALDALSLDLSSVESIRGFVETFHKTGLPLHVLVNNAG----KPGTIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAAAPASAIGHGDREQSPENVPGTGPSSRIVNVGSRLEKRGNLWAAAVSDGGGDTAVPPGTRWFQPPPRKKHDAFGLYGSSKLCNMLFTFELDRRLEAARSGGRRLVTANIVTPGIVNTKLGDGTVSPWVAWAGAPLKAALMRTADKGAETVVWAATSPEIEEIGGGKFFGDKNEVPCSDASRDEDLARQLWEATEQAVGLEESERVV 378          
BLAST of mRNA_Ecto-sp13_S_contig8336.19699.1 vs. uniprot
Match: A0A3M6UUN6_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UUN6_POCDA)

HSP 1 Score: 144 bits (364), Expect = 3.570e-35
Identity = 108/296 (36.49%), Postives = 149/296 (50.34%), Query Frame = 1
Query:    1 QCDAACEDIRRRVPGAALDSLTLDLSSVESIRGFVETFHKTGLPLHVLVNNAGI-IPGKPGTIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAAPASAFGHGDREQSRENVPGTGPSPRIVNVGSRLEKRGSLWAAAVSDGGRDPAVPPGTRWFHPPPGKKHDAFGLYASSKLCNMLFTFELDRRLETARSGGRRLVTANIVTPGIVNTKLGDGTVSPWVA-WAGGPLKAALMRTADKGAETVVWAATSPEIEEIGGGKFFGDKKEVPCSDASRDEDLARQLWDATEQAVGLEE 882
            + + A + IR  +P A ++ + LDL+S+ SIR FV  F K GLPLH+LVNNAGI IP    T  G E    VNHLG F LT+LLL DL K+          G  DR              R+V + S     G +    +            +++++ P       +  Y+ SKL N+LFT+EL +RLE   S     VTAN V PG+VNT L      PW+       L   L +T  +GAE  ++ A SPE+E  G GK+F + +    SD S  ED+ R+LW A+ +  G+ E
Sbjct:   71 EAEKAIKKIREELPQAEVEYMELDLASLASIRKFVMNFKKKGLPLHILVNNAGIMIPPYSKTEDGFELQFGVNHLGHFALTNLLLDDLIKS----------GSPDR------------CSRVVTLSSEAHIPGKINFEDLQ-----------SKYYYSP-------YSGYSQSKLANILFTYELQKRLEERESP----VTANAVHPGVVNTDLFQHI--PWIMRMPQNVLAYFLFKTPQQGAENSIYVALSPELESKG-GKYFVNCQSTQSSDESYSEDVQRRLWKASCELTGIPE 319          
BLAST of mRNA_Ecto-sp13_S_contig8336.19699.1 vs. uniprot
Match: A0A7Z9LQK3_9BACT (SDR family oxidoreductase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Z9LQK3_9BACT)

HSP 1 Score: 140 bits (354), Expect = 3.370e-34
Identity = 110/304 (36.18%), Postives = 149/304 (49.01%), Query Frame = 1
Query:   13 ACEDIRRRVPGAA----------LDSLTLDLSSVESIRGFVETFHKTGLPLHVLVNNAGIIPGK-PGTIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAAPASAFGHGDREQSRENVPGTGPSPRIVNVGSRLEKRGSL-WAAAVSDGGRDPAVPPGTRWFHPPPGKKHDAFGLYASSKLCNMLFTFELDRRLETARSGGRRLVTANIVTPGIVNTKLGDGT---VSPWVAWAGGPLKAALMRTADKGAETVVWAATSPEIEEIGGGKFFGDKKEVPCSDASRDEDLARQLWDATEQAVGLE 879
            AC D+ R  P  A          +D L LDL+S ESIR F +TF KT   L VLVNNA ++P K   T  G E    VNHLG FLLTHLLL  L++ +                         PS R+V V S +   G + +    SD                   +K+   G Y +SKL N+LFTFEL RRLE         VTAN + PG+VNT++       V P V +AG       M  ++KGA T +  AT+PE+E +  GK+F    E  CS  ++D+++A +LW+ +EQ  G++
Sbjct:   33 ACRDVERSQPVQAKIKKDSGSEKVDLLKLDLASQESIRSFADTFLKTYDRLDVLVNNAAVVPSKRQETAEGYEAQFGVNHLGHFLLTHLLLDRLKECA-------------------------PS-RVVTVASIVHTSGIINFDDLQSD-------------------EKYSIMGAYNNSKLANVLFTFELARRLEGTG------VTANCLHPGVVNTRIMRDLPIIVRPIVKFAG-----LFMLNSEKGAATSLHLATAPELESVT-GKYFDKCAESKCSSKAKDQEVASKLWELSEQFTGIQ 279          
BLAST of mRNA_Ecto-sp13_S_contig8336.19699.1 vs. uniprot
Match: A0A7Y7C9R3_9DELT (SDR family oxidoreductase n=6 Tax=Myxococcaceae TaxID=31 RepID=A0A7Y7C9R3_9DELT)

HSP 1 Score: 140 bits (353), Expect = 5.530e-34
Identity = 96/293 (32.76%), Postives = 149/293 (50.85%), Query Frame = 1
Query:   10 AACEDIRRRVPGAALDSLTLDLSSVESIRGFVETFHKTGLPLHVLVNNAG-IIPGKPGTIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAAPASAFGHGDREQSRENVPGTGPSPRIVNVGSRLEKRGSLWAAAVSDGGRDPAVPPGTRWFHPPPGKKHDAFGLYASSKLCNMLFTFELDRRLETARSGGRRLVTANIVTPGIVNTKLGDGTVS--PWVAWAGGPLKAALMRTADKGAETVVWAATSPEIEEIGGGKFFGDKKEVPCSDASRDEDLARQLWDATEQAVGLE 879
            AA + + + V GA++D++  DLSS++++R   +TF      L VLVNNAG II  +  T+ G+E ++  NHL PFLLTHLL+  L+    A+ PA                      R+VN+ S + + G L  + +                     +++D F +YA+SKL N+LFT  L +RLE  R      VT N V PG+V +  G  T     W+   G P       +A+ GA+T ++ A+SPE++ + G  F   +K  P + A+RD+ LA QLW  + +  G++
Sbjct:   48 AAVDAVNQVVAGASVDTILADLSSLQAVRALADTFRSRHSRLDVLVNNAGLIIDQRQVTVDGLEATLATNHLAPFLLTHLLMDTLK----ASGPA----------------------RVVNLSSDVHRIGKLDFSDLQS------------------ERRYDGFRVYANSKLANVLFTHSLSKRLEGTR------VTTNAVHPGVVRSGFGHNTKGYFRWIVKLGAPF----FLSAEGGAKTSIYLASSPEVDGVSGKYFIRCRKRKPSA-AARDDALAEQLWRESARLTGVQ 285          
BLAST of mRNA_Ecto-sp13_S_contig8336.19699.1 vs. uniprot
Match: UPI001F220AF2 (SDR family oxidoreductase n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F220AF2)

HSP 1 Score: 139 bits (349), Expect = 1.990e-33
Identity = 101/293 (34.47%), Postives = 146/293 (49.83%), Query Frame = 1
Query:   10 AACEDIRRRVPGAALDSLTLDLSSVESIRGFVETFHKTGLPLHVLVNNAG-IIPGKPGTIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAAPASAFGHGDREQSRENVPGTGPSPRIVNVGSRLEKRGSLWAAAVSDGGRDPAVPPGTRWFHPPPGKKHDAFGLYASSKLCNMLFTFELDRRLETARSGGRRLVTANIVTPGIVNTKLGDGTVS--PWVAWAGGPLKAALMRTADKGAETVVWAATSPEIEEIGGGKFFGDKKEVPCSDASRDEDLARQLWDATEQAVGLE 879
            AA + +R   PGA +DSL  DLSS++++R   +TF      L VL+NNAG II  +  T+ G E ++  NHL PFLLT+LLL DL K S AA                         R++NV S +   G L    +                     +++D F +YA+SKL N+LFT  L +RLE  R      VT N V PG+V+T  G  +     W+   G P     M +A  GA+T ++ A+SPE+E + G  F   +K  P + A+RD+ LA +LW  + +  G++
Sbjct:   48 AAVDAVRAHAPGAQVDSLLADLSSMKAVRELAQTFRSRYPRLDVLLNNAGLIIDRRQVTVDGFEATLATNHLAPFLLTNLLL-DLLKDSGAA-------------------------RVINVSSDVHHIGKLQFDDLQS------------------ERRYDGFRVYATSKLANLLFTRALAKRLEGTR------VTTNAVHPGVVSTGFGHNSQGFFKWLVKLGAPF----MLSAASGAKTSIYLASSPEVEGVTGQYFIRRRKRRPSA-AARDDALAERLWQESARLTGVK 285          
BLAST of mRNA_Ecto-sp13_S_contig8336.19699.1 vs. uniprot
Match: A0A402AQ45_9CHLR (Short-chain dehydrogenase n=1 Tax=Dictyobacter kobayashii TaxID=2014872 RepID=A0A402AQ45_9CHLR)

HSP 1 Score: 138 bits (348), Expect = 2.750e-33
Identity = 102/299 (34.11%), Postives = 149/299 (49.83%), Query Frame = 1
Query:    7 DAACEDIRRRVPGAALDSLTLDLSSVESIRGFVETFHKTGLPLHVLVNNAGIIPGKPG-TIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAAPASAFGHGDREQSRENVPGTGPSPRIVNVGSRLEKRGSLWAAAVSDGGRDPAVPPGTRWFHPPPGKKHDAFGLYASSKLCNMLFTFELDRRLETARSGGRRLVTANIVTPGIVNTKL-GDGTVSPWVAWAGGPLKAALMRTADKGAETVVWAATSPEIEEIGGGKFFGDKKEVPCSDASRDEDLARQLWDATEQAVGLEESERVV 897
            +AA  +++ +     +D LT D+SS+ S+R   +  H+    LHVL+NNAG +  K   ++ G+E++   N++GPFLLT+LLL DL KASA A                         RI+NV S   K GS+    +                     K++ AF +Y +SKL   LFT+EL RRLE         VT N + PG+V T   GDG +        G L   +M T +KGA+T ++ ATSPE++ +  GK+F   K  P S AS DE   ++LW  TEQ +  + ++ V 
Sbjct:   46 EAAQAEVKAQSGNDKVDLLTADMSSLASVRQLSQEVHEKYPQLHVLLNNAGGMNNKREVSVDGIERTFATNYVGPFLLTNLLL-DLLKASAPA-------------------------RIINVSSTAHKMGSIDFDDLQS------------------EKRYRAFPVYGTSKLALTLFTYELARRLEGTG------VTVNNLHPGVVGTSFFGDGLL--------GRLSKLVMLTPEKGAQTSIYLATSPEVDNVT-GKYFDKSKATPSSKASYDEQAGKRLWQVTEQLIEQKSNQGVT 285          
BLAST of mRNA_Ecto-sp13_S_contig8336.19699.1 vs. uniprot
Match: A0A2A5DP57_9BACT (Short-chain dehydrogenase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A2A5DP57_9BACT)

HSP 1 Score: 136 bits (342), Expect = 1.780e-32
Identity = 104/290 (35.86%), Postives = 144/290 (49.66%), Query Frame = 1
Query:   19 EDIRRRVPGAALDSLTLDLSSVESIRGFVETFHKTGLPLHVLVNNAGIIP-GKPGTIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAAPASAFGHGDREQSRENVPGTGPSPRIVNVGSRLEKRGSLWAAAVSDGGRDPAVPPGTRWFHPPPGKKHDAFGLYASSKLCNMLFTFELDRRLETARSGGRRLVTANIVTPGIVNTKLGDGT---VSPWVAWAGGPLKAALMRTADKGAETVVWAATSPEIEEIGGGKFFGDKKEVPCSDASRDEDLARQLWDATEQAVGL 876
            + I+       +D L LDL+S+ SIR F   F +T   L VL+NNA IIP  +  T  G E    VNHLGPFLLTHLLL  +++++                         PS RIVNV S +  +G++    +                     KK+     Y  SKL N+LFT+EL RRLE   SG    VT N + PG+VNT +       + P V  AG       M + ++GA T ++ +TSP+++ I  GKFF + KE   S  S+DEDLA++LWD +E   G+
Sbjct:   49 DQIKENTGSNKIDLLQLDLASLASIRDFANNFLETYPRLDVLINNAAIIPLSRQETQDGFESQFGVNHLGPFLLTHLLLDRIKESA-------------------------PS-RIVNVTSIMHHQGAIDFDNLQS------------------EKKYGTLDAYRQSKLGNVLFTYELARRLEG--SG----VTVNCLHPGVVNTGIARSVPFFLQPLVKLAG----KFFMLSPEQGAATSLYVSTSPDLDGIT-GKFFNESKETRSSKLSQDEDLAQRLWDVSENLTGI 283          
BLAST of mRNA_Ecto-sp13_S_contig8336.19699.1 vs. uniprot
Match: A0A661UTA2_9CHLR (Short-chain dehydrogenase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A661UTA2_9CHLR)

HSP 1 Score: 134 bits (338), Expect = 7.720e-32
Identity = 106/293 (36.18%), Postives = 146/293 (49.83%), Query Frame = 1
Query:    7 DAACEDIRRRVPGAALDSLTLDLSSVESIRGFVETFHKTGLPLHVLVNNAG-IIPGKPGTIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAAPASAFGHGDREQSRENVPGTGPSPRIVNVGSRLEKRGSLWAAAVSDGGRDPAVPPGTRWFHPPPGKKHDAFGLYASSKLCNMLFTFELDRRLETARSGGRRLVTANIVTPGIVNTKLG--DGTVSPWVAWAGGPLKAALMRTADKGAETVVWAATSPEIEEIGGGKFFGDKKEVPCSDASRDEDLARQLWDATEQAVGL 876
            +AA  DI++R     ++ +  D +S+ESIRGF E F      L VLVNNAG I   +  T+ G E +  VNHLG FL+T+LLL DL KASA A   S                       V+ G+ L  +G  +    ++ G                   +   G+Y  SKL N+LFT+EL RRLE   SG    VTAN + PG+V +  G  +G +   V  A   L     ++  +GA T +  A SP++E +  GK+F D KE P S AS DE+ AR+LW  +E+  GL
Sbjct:   45 EAALADIKKRSGSDDIELMLADFASLESIRGFAEKFKANHDRLDVLVNNAGGINTSRSETLDGFETTFGVNHLGYFLVTNLLL-DLIKASAPARVVS-----------------------VSSGAHLRAKGMNFDDLNAEQG-------------------YSGMGVYGKSKLANVLFTYELARRLEG--SG----VTANCLHPGVVRSGFGQNNGGLIAIVFKAAYTLMTPFTKSNAQGAATSIHLAASPDVEGVT-GKYFADSKETPSSAASHDEEAARRLWKLSEKMTGL 287          
BLAST of mRNA_Ecto-sp13_S_contig8336.19699.1 vs. uniprot
Match: A0A6P1NVF1_9BACT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Nibribacter ruber TaxID=2698458 RepID=A0A6P1NVF1_9BACT)

HSP 1 Score: 135 bits (339), Expect = 1.210e-31
Identity = 100/295 (33.90%), Postives = 141/295 (47.80%), Query Frame = 1
Query:   13 ACEDIRRRVPGAALDSLTLDLSSVESIRGFVETFHKTGLPLHVLVNNAGIIPGKPGTIR-GMEQSMVVNHLGPFLLTHLLLPDLRKASAAAAPASAFGHGDREQSRENVPGTGPSPRIVNVGSRLEKRGSLWAAAVSDGGRDPAVPPGTRWFHPPPGKKHDAFGLYASSKLCNMLFTFELDRRLETARSGGRRLVTANIVTPGIVNTKLGDGTVSPWVAWAGGPLKAAL------MRTADKGAETVVWAATSPEIEEIGGGKFFGDKKEVPCSDASRDEDLARQLWDATEQAVGL 876
            A + I  +VP A L     DLSS+E +R   +        + VLVNNAGIIPG   T + G+E + V+NHL PFLLT+LL+ +L  A                          P  RI+N+ S   + G +  A + +                   K + A   YA SKL N+LFT+EL RR+E         +T N V PG+V T  G G+         G ++A L      MRTA KGAET V+ ATSP +  +  GK+F DKK++  +  + +   AR+LW+ +E+  G 
Sbjct:   91 AMDQIMAKVPHAQLQLHLADLSSLEEVRRLAQDLQAAYPVIDVLVNNAGIIPGLRSTSKEGLETAWVINHLAPFLLTNLLMDNLLAA--------------------------PQGRIINLTSEAHRLGQIDFAQLGN------------------PKHYSAITAYADSKLANILFTYELARRVEFTN------LTVNCVHPGVVATNFGKGS--------SGFVRALLFMGRLFMRTAAKGAETPVFLATSPSMATLS-GKYFKDKKQIKSAVGTYNAHTARRLWEVSEEQTGF 326          
BLAST of mRNA_Ecto-sp13_S_contig8336.19699.1 vs. uniprot
Match: A0A6S7K1K4_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K1K4_PARCT)

HSP 1 Score: 134 bits (338), Expect = 1.810e-31
Identity = 99/295 (33.56%), Postives = 149/295 (50.51%), Query Frame = 1
Query:    7 DAACEDIRRRVPGAALDSLTLDLSSVESIRGFVETFHKTGLPLHVLVNNAGIIPGKPG--TIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAAPASAFGHGDREQSRENVPGTGPSPRIVNVGSRLEKRGSLWAAAVSDGGRDPAVPPGTRWFHPPPGKKHDAFGLYASSKLCNMLFTFELDRRLETARSGGRRLVTANIVTPGIVNTKLGD-GTVSPWVAWAGGPLKAALMRTADKGAETVVWAATSPEIEEIGGGKFFGDKKEVPCSDASRDEDLARQLWDATEQAVGLEE 882
            D A  +IR +V  A +    LDLSS+ S+R FV+ F +T   LH+L+NNAGI  G P   +  G E    VNHLG FLLT+LL+  L    A +AP+                      R++ V S L KRG++    +S                    K +     YA SKL N+LF  EL++RL +        VT N + PGIV T+L    T +P + +   PL   +++T  +GA+T  + AT P ++E+  G +FGD K+  C+  ++D+  A++LW+ +E+  GL +
Sbjct:   88 DKAASEIRSQVENAQVAVYFLDLSSLNSVRKFVQDFVRTENGLHILINNAGIY-GCPHWKSEDGYEMQFAVNHLGHFLLTNLLMDTL----AQSAPS----------------------RVLVVTSSLHKRGTIEFDDLSG------------------DKDYKPRKAYAQSKLANLLFAHELNKRLPSG-------VTVNSLHPGIVWTELARYSTFNPILRYLAYPLLLLILKTPWQGAQTTTYCATEPSLQEVS-GLYFGDCKQEECAQHAKDDGTAKKLWEVSEKMTGLHQ 329          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8336.19699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMA9_ECTSI1.280e-19092.67Dehydrogenase/reductase SDR family member 13 n=2 T... [more]
A0A3M6UUN6_POCDA3.570e-3536.49Uncharacterized protein n=1 Tax=Pocillopora damico... [more]
A0A7Z9LQK3_9BACT3.370e-3436.18SDR family oxidoreductase n=1 Tax=Candidatus Hydro... [more]
A0A7Y7C9R3_9DELT5.530e-3432.76SDR family oxidoreductase n=6 Tax=Myxococcaceae Ta... [more]
UPI001F220AF21.990e-3334.47SDR family oxidoreductase n=1 Tax=Myxococcus stipi... [more]
A0A402AQ45_9CHLR2.750e-3334.11Short-chain dehydrogenase n=1 Tax=Dictyobacter kob... [more]
A0A2A5DP57_9BACT1.780e-3235.86Short-chain dehydrogenase n=1 Tax=Candidatus Hydro... [more]
A0A661UTA2_9CHLR7.720e-3236.18Short-chain dehydrogenase n=1 Tax=Chloroflexi bact... [more]
A0A6P1NVF1_9BACT1.210e-3133.90SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A6S7K1K4_PARCT1.810e-3133.56Uncharacterized protein n=2 Tax=Paramuricea clavat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8336contigEcto-sp13_S_contig8336:4442..6907 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score550.1
Seed ortholog evalue6.6e-154
Seed eggNOG ortholog2880.D7FMA9
Model size1737
KEGG rclassRC00649
KEGG koko:K11153,ko:K11162
KEGG ReactionR08379,R08383
KEGG Pathwayko00830,ko01100,map00830,map01100
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-17_003630.1
EC1.1.1.300
Cds size900
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464104.0791178-UTR-Ecto-sp13_S_contig8336:4441..52781681464104.0791178-UTR-Ecto-sp13_S_contig8336:4441..5278Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8336 4442..5278 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464104.098607-CDS-Ecto-sp13_S_contig8336:5278..60211681464104.098607-CDS-Ecto-sp13_S_contig8336:5278..6021Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8336 5279..6021 -
1681464104.1094215-CDS-Ecto-sp13_S_contig8336:6750..69071681464104.1094215-CDS-Ecto-sp13_S_contig8336:6750..6907Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8336 6751..6907 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8336.19699.1prot_Ecto-sp13_S_contig8336.19699.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8336 5279..6907 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8336.19699.1

>prot_Ecto-sp13_S_contig8336.19699.1 ID=prot_Ecto-sp13_S_contig8336.19699.1|Name=mRNA_Ecto-sp13_S_contig8336.19699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=300bp
QCDAACEDIRRRVPGAALDSLTLDLSSVESIRGFVETFHKTGLPLHVLVN
NAGIIPGKPGTIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAAPASAF
GHGDREQSRENVPGTGPSPRIVNVGSRLEKRGSLWAAAVSDGGRDPAVPP
GTRWFHPPPGKKHDAFGLYASSKLCNMLFTFELDRRLETARSGGRRLVTA
NIVTPGIVNTKLGDGTVSPWVAWAGGPLKAALMRTADKGAETVVWAATSP
EIEEIGGGKFFGDKKEVPCSDASRDEDLARQLWDATEQAVGLEESERVV*
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mRNA from alignment at Ecto-sp13_S_contig8336:4442..6907-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8336.19699.1 ID=mRNA_Ecto-sp13_S_contig8336.19699.1|Name=mRNA_Ecto-sp13_S_contig8336.19699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2466bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8336:4442..6907- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGTGTGACGCAGCCTGCGAAGACATTCGCCGGAGGGTGCCGGGCGCGGC GTTGGATTCGTTAACGCTAGACCTTTCCAGCGTCGAAAGCATCCGCGGGT TCGTCGAGACGTTCCACAAGACTGGCCTCCCGCTGCATGTTCTCGTCAAC AACGCCGGTGATACAATAGGAGACACGCGTCTAGACTAGCCTTCTGGTGT TTGTGACGATGTTGTTGTTGCCATTGTTGTTGTTGCTGTTGTTGTTGTCG TTGTTGTTGCTGTTAGTGTTGTCGTCGTTGTTGTTGCTGTTGTTGTTGCT GTTGTTGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGATGTTGTTGTTATTGTTG TTGTTGTTGTTGTTGCCATTGCGGTGGTTGTCGTTGATGGCGCCTGTCGT TCTTGCTGGCGACGGTGGCGTTGGTGGTGATGGTGATGTTTCCGATTTTT CCTTTCGCCGTTGCGCGGCTTGCCGTCCTCGGCGTTAACCCGCCTATGGA CGGAATCACACGCTGATTTCGAAAAATTTGGGGACGCAGACATTCTCGGG CTCCTCGGCGCCCCAAGCTGGCGTGATCTGCCCGATGTCTCCACCGCGGT ACAGAGTGCCGCTCGTGAAAGGTTGTAGGACATTCACTTCATTGAGATAA CGTCTTGCTCGCCTCACTGCCTGAAACTCGGACGCATCATGCCGATAGCA GGTCGTGTGCCCCTCCAGATCGCAATGATTCACTCGTGCCCCTCACCTCC TCCTCTTTCCCCCCGCCTGTGTCCGTTCTCGTCGCGTGTCAAACGTTTCG TTTTAACACAACGGCTCGGTGTTCTCTTCCACGAAGGGATAATACCAGGG AAGCCCGGGACAATTCGCGGGATGGAGCAGAGCATGGTCGTGAATCATCT CGGCCCTTTCCTGCTGACCCACCTGTTACTCCCGGACCTGCGAAAAGCAT CCGCCGCCGCCGCTCCGGCATCCGCTTTTGGTCATGGAGATCGCGAGCAA AGTCGTGAGAACGTTCCTGGAACCGGTCCTTCACCGAGAATCGTAAACGT TGGGTCTCGCCTTGAGAAGCGGGGTAGTCTTTGGGCGGCAGCGGTATCCG ACGGCGGCAGGGACCCCGCGGTGCCCCCGGGGACGCGCTGGTTCCACCCC CCCCCCGGGAAAAAGCACGACGCTTTCGGCCTGTACGCATCCTCGAAGCT GTGCAACATGCTCTTCACATTCGAGCTCGACAGGCGGCTAGAAACCGCGC GATCAGGGGGGCGACGGCTTGTTACGGCTAACATCGTGACCCCGGGAATC GTAAACACAAAGCTCGGCGACGGCACGGTCAGCCCTTGGGTCGCTTGGGC GGGCGGGCCGCTGAAGGCGGCACTCATGAGGACCGCCGACAAGGGCGCCG AGACCGTAGTGTGGGCGGCAACATCTCCCGAGATCGAAGAGATCGGCGGC GGAAAGTTTTTCGGCGACAAGAAAGAAGTCCCCTGCAGTGACGCCTCTAG GGACGAGGACCTCGCCCGACAGCTTTGGGACGCTACGGAGCAAGCGGTAG GGTTAGAAGAAAGCGAACGGGTCGTGTGACCTTGCTGCTGCGGTCGTGGT GCGCTGGAGTAGCCCCTTTGGACGCGCAGTAGCTCTCGTGGTTTGTGGTC AGCTACCTCGGTGTCCGAGGGATTTGTGTCGAGGCGCCCGAGATCCGAGT GCGTTGTCTCTGTTCGTTTGTCTCTTTTCTTTATTGAAAAGCGCTGATGG TTGTGGGCGAACAGAAAGTGGTTGCAGCCGACAGGGAACGTGCTCCAAAG CTCTGATTACTTGTAGAGGGTCGCGCACGTTTGGTCTAGCAGCCCCTGCT TTCTCCAGGCGGACAGCAACTCAACTGCCGATGGTGTGCGAGGTTAGGTT GCTGTTTTGTCCAGAGATAGATCATCAGTTGTTCGTGGCGGAGGTATGCA TGATTCTGAGCCGATCTCCTCTTAAGACCCTCTTCTTGTACAACGTTTGC GGTTTATTTGTTTCCTCGGTGTGGTTTGTTAGTGAGAGTTAAAGCCACCG ACCATGCCTTGTCCAACTGGCACACGTGTGTCAGATAGACACGCGGTTTC CCGCCGATGTGCCCGCGTATGGCGGGTATGAGCCTGACGGGTATGGAATA TTCCGGCATAGCGGTATGGGATGGGGGATGGCATTTGTCGTGTTTGTTTG TGCGTGTCGAGTGGAACATGCAGGCCTCACCCGTGCACCATCTTGGCACG TTGGATGTGTATCTACTGTATGTGTGCCAGTGTGTATTTCTTCTGTGTGC CCCCCTTCGGCGGTACTTGGCTTGTGACCACGGAAGGCATCCGCGTCGGT TGAACATTAGAAGGTACTGAGCGGAGACCGGAACGGTTTCTAGATGTGAA AACAACAACAAGACCA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8336:4442..6907-

>mRNA_Ecto-sp13_S_contig8336.19699.1 ID=mRNA_Ecto-sp13_S_contig8336.19699.1|Name=mRNA_Ecto-sp13_S_contig8336.19699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=900bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8336:4442..6907- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGTGTGACGCAGCCTGCGAAGACATTCGCCGGAGGGTGCCGGGCGCGGC
GTTGGATTCGTTAACGCTAGACCTTTCCAGCGTCGAAAGCATCCGCGGGT
TCGTCGAGACGTTCCACAAGACTGGCCTCCCGCTGCATGTTCTCGTCAAC
AACGCCGGGATAATACCAGGGAAGCCCGGGACAATTCGCGGGATGGAGCA
GAGCATGGTCGTGAATCATCTCGGCCCTTTCCTGCTGACCCACCTGTTAC
TCCCGGACCTGCGAAAAGCATCCGCCGCCGCCGCTCCGGCATCCGCTTTT
GGTCATGGAGATCGCGAGCAAAGTCGTGAGAACGTTCCTGGAACCGGTCC
TTCACCGAGAATCGTAAACGTTGGGTCTCGCCTTGAGAAGCGGGGTAGTC
TTTGGGCGGCAGCGGTATCCGACGGCGGCAGGGACCCCGCGGTGCCCCCG
GGGACGCGCTGGTTCCACCCCCCCCCCGGGAAAAAGCACGACGCTTTCGG
CCTGTACGCATCCTCGAAGCTGTGCAACATGCTCTTCACATTCGAGCTCG
ACAGGCGGCTAGAAACCGCGCGATCAGGGGGGCGACGGCTTGTTACGGCT
AACATCGTGACCCCGGGAATCGTAAACACAAAGCTCGGCGACGGCACGGT
CAGCCCTTGGGTCGCTTGGGCGGGCGGGCCGCTGAAGGCGGCACTCATGA
GGACCGCCGACAAGGGCGCCGAGACCGTAGTGTGGGCGGCAACATCTCCC
GAGATCGAAGAGATCGGCGGCGGAAAGTTTTTCGGCGACAAGAAAGAAGT
CCCCTGCAGTGACGCCTCTAGGGACGAGGACCTCGCCCGACAGCTTTGGG
ACGCTACGGAGCAAGCGGTAGGGTTAGAAGAAAGCGAACGGGTCGTGTGA
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