mRNA_Ecto-sp13_S_contig8301.19658.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: D7FT85_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT85_ECTSI) HSP 1 Score: 587 bits (1512), Expect = 7.790e-203 Identity = 300/312 (96.15%), Postives = 302/312 (96.79%), Query Frame = 1
Query: 1 RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFPAW 936
RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKA LEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSE TLHDLVPIGEGAVGADDWAFLSGA AGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFE LVQRHHPRLV+KLLQLG+QPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAV EIFSDGRQLEVVPLLQAFMFPAW
Sbjct: 320 RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKAL-TPQDLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSEATLHDLVPIGEGAVGADDWAFLSGAGAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFESLVQRHHPRLVRKLLQLGLQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVMEIFSDGRQLEVVPLLQAFMFPAW 630
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A6H5JP51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP51_9PHAE) HSP 1 Score: 570 bits (1469), Expect = 6.740e-198 Identity = 299/330 (90.61%), Postives = 301/330 (91.21%), Query Frame = 1
Query: 1 RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENK---HHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQ---------------VLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFPAW 936
RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKAS+ LEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSE TLHDLVPIGEGAVGADDWAFLSGA AGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFE RHHPRLV+KLLQLGVQPLQLAMPWIQFGFVTYLEADQ VLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAV EIFSDGRQLEVVPLLQAFMFPAW
Sbjct: 199 RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASKQALTPQDLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSEATLHDLVPIGEGAVGADDWAFLSGAGAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFE----RHHPRLVRKLLQLGVQPLQLAMPWIQFGFVTYLEADQASLCTTACSSSPCDLVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVMEIFSDGRQLEVVPLLQAFMFPAW 524
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A836CJW0_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW0_9STRA) HSP 1 Score: 302 bits (774), Expect = 3.350e-92 Identity = 167/315 (53.02%), Postives = 205/315 (65.08%), Query Frame = 1
Query: 1 RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENKH----HLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQ-PLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFP 930
RF ER + G L G + +ARRGV +LRP +WR +LGLP A+ ++ E+ L+ EV R ELVTD LY LDV I DDDKYF FEE L DV++AF+RD V + H +P GA G PPCGVQPFRGLV+YAA LCFL+ ER VY R M+ R+WCRLNA+RS PG LL LL+LFE L++ HHP+L+ KL +LG+Q PL+LAMPWIQFGFV YLE +VL LWDR+L YDSL LL LAA+V VFR+ VL DA AV + F+DG L+ +PLLQAF+FP
Sbjct: 305 RFGDERRAAGEAALAGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPIPHRIAGAGAPR----------GTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLFP 609
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: F0YBG1_AURAN (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBG1_AURAN) HSP 1 Score: 288 bits (736), Expect = 9.230e-90 Identity = 153/314 (48.73%), Postives = 207/314 (65.92%), Query Frame = 1
Query: 1 RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENKHHLE----YFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHD-LVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMF 927
RF+ E + G++ L G P A YARRGV SLRP ++R +LGLP + E Y+A L + VD+ ELVTDEL+ +DVQ ++D+D YFPFEE L +V+LAFSRDPWVL +S H L + W +AG PPC VQPFRG V+Y A L F++E E +Y+ LR M+A+FWC+LN +R+ LL L KLFE LV +HP+L L+Q+GV PL +A+PWIQFGFV L+ DQVLLLWDR+LG++ L LL +LAA++ V+R++ +L + V ++FSDG L+VVPL+Q F+F
Sbjct: 42 RFSDEWHALGKRCLARGHVPLARRYARRGVPPSLRPQIYRVLLGLPNVEHPQGCSEAEKAYYARLKAHVDKIELVTDELFQMDVQHVADNDYYFPFEEALGNVVLAFSRDPWVLHNSAVRTHARLAAKHKEPTDGPAW------KAGSAVPPCAVQPFRGFVSYTAPLTFVYEREEPIYYCLRAMYAKFWCKLNVMRTAECTLLPLCKLFEQLVIENHPKLFFYLVQIGVDPLAVALPWIQFGFVGLLDVDQVLLLWDRILGFEDLSLLPILAAAIFVYRSEKLLSATSLDDVKDMFSDGSILQVVPLIQTFLF 349
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A8J2WGK4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WGK4_9STRA) HSP 1 Score: 272 bits (695), Expect = 1.810e-81 Identity = 150/305 (49.18%), Postives = 194/305 (63.61%), Query Frame = 1
Query: 28 GRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASE----NKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFP 930
G K L G P A YARRGV SLRPAV+R++LGLP + + Y+ L VD ELVTDELY +DVQ ++DDD YF F+E L + +LAFSRD WV ++ H +P + + G PPCGVQPFRG V+YAA L F+F ++YF R +A+ +CRLN +R+ LL L LFE LV HHPRL L+Q+GV PL +A+PWIQFGFV L+ +QVLLLWDRLLG++ L LLSVLAA++ V+R++ +LQ S E+F+DG LEVVPLLQ F++P
Sbjct: 230 GEKCLAEGHIPLARTYARRGVPPSLRPAVYRSLLGLPHMEDAQATSAFEERYYEDLRDRVDSIELVTDELYQMDVQHVADDDTYFIFDEMLGNCVLAFSRDSWVPKNCVVKTHAPLPC--------ENDLMKGQPV----PPCGVQPFRGFVSYAAPLTFVFGRETSLYFAFRAFYAQHFCRLNVLRTNQNTLLPLCALFERLVIEHHPRLFFYLVQVGVDPLAIALPWIQFGFVGLLDVEQVLLLWDRLLGFEDLALLSVLAAAIFVYRSEKLLQCSSLEEAREMFADGAVLEVVPLLQTFLWP 522
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A7S3YGJ5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGJ5_HETAK) HSP 1 Score: 255 bits (652), Expect = 2.940e-78 Identity = 137/284 (48.24%), Postives = 181/284 (63.73%), Query Frame = 1
Query: 64 AMEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQ 915
A +YA++GV +LR +WR LGL + +F L+SE R +L+TD+L+ +DVQFI+DDD+YF FE+ L D + AFSRD VLR S+ H + G G G PPCGVQPFRG NY A LCFL+ + Y R ++ RFWCRLNAVR PG LL L KLFE LV + P +L+ LGV PL + MPWIQFGFV +LE DQ+LLLWDR++G+ SL LL VLAAS+++FR+ +L+V A + ++F D +L+VVPLL+
Sbjct: 1 ARQYAKQGVPTALRAGIWRCALGLRPSGAIAGESAHFRWLLSEGQRIDLITDDLFEMDVQFIADDDRYFVFEDMLRDCVGAFSRDAQVLRGSDVLPHQPLVGHHG----------EGQAPGTAVPPCGVQPFRGFCNYLAPLCFLYHDAPTCYGVARALWCRFWCRLNAVRGRPGTLLPLCKLFEDLVLQGAPDAFARLVALGVSPLSIVMPWIQFGFVGFLEPDQILLLWDRIIGFQSLHLLPVLAASIIMFRSHNILKVDSADGLRDLFQDITRLKVVPLLR 274
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A7S2H1X2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H1X2_9STRA) HSP 1 Score: 253 bits (645), Expect = 2.150e-76 Identity = 140/317 (44.16%), Postives = 194/317 (61.20%), Query Frame = 1
Query: 4 FTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSE-TTLHDLVPIGEGAVGADDWAFLSGAEAGG------YCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFPA 933
F + +G +++ G+ P ++AR GV +LRP +WR +LGL K+ +++A L SEV R E TD L +DV SD + YFPFE+ L V+LAFSRD WV S T H L+ + D + + GG PP GV PF+GL++YAA L LFEE +AV+ R M+AR+WCRLN +R+ G LL L LFE L+Q H PRL L + G+QPL +A+PWIQF FV L+ QVL+LWDR+LG+D L LL VLA ++ +FR+ V+ ++D A + E+F +G +L V PLLQ +FP+
Sbjct: 19 FVGQAQKRGHSLIQDGYIPAVRQFARTGVCVALRPRMWRIMLGL-KSDVTAGESDHYAKLTSEVQRVEYATDGLLEMDVSQSSDLENYFPFEDLLKSVVLAFSRDAWVRGMSMFQTHHPLIDPAD----LDSTSTSPERDKGGRSNCLKMVPPSGVLPFKGLMSYAAPLTLLFEEEDAVFSVFRAMYARYWCRLNVLRTAEGTLLPLCHLFEELLQCHDPRLFFHLTRSGIQPLAIALPWIQFAFVGLLDPGQVLVLWDRILGFDDLALLPVLACAIFIFRSPTVMGIADKAGIEEVFLEGTELRVAPLLQHLVFPS 330
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A0G4ISX4_PLABS (Rab-GAP TBC domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4ISX4_PLABS) HSP 1 Score: 226 bits (575), Expect = 1.440e-63 Identity = 136/336 (40.48%), Postives = 196/336 (58.33%), Query Frame = 1
Query: 4 FTAERLSQGRKILKAGFAPEA--MEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPI-----GEGAV-GADDWAFLSGAEAGGYC--------------------PPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMF 927
F +R +G ++L A M YA+ GV SLRP W+ ILG+ + + + Y+ L+++V R EL+TD+LY L+VQ +D+ YF FE+ L +++LAFSRD W+ ++S L L P+ E AV G DD A A+A G PPCGV PF V AA LC+LF+ E YF R M+AR++CRL+ + S PG +L L KLFE LVQ P++ +++G+ PL++ PW+ F YL DQVL LWDR+L YDSL+LL++LA+++ +FR+K VL + + + +IF DG V+PLLQ F+F
Sbjct: 220 FRNQRYVEGERLLNDAQTTVADLMRYAQTGVPASLRPRFWKRILGVWTSDRD---VAYYERLITQVRRWELITDDLYRLEVQETTDNAAYFVFEDMLDEIMLAFSRDSWLPKNSTLPLC-LAPLTTNVFSEAAVPGRDDGAGYPFADANGKLSPSLVENSGIEIDDQGTATIPPCGVVPFHHQVMLAAPLCYLFQRCEHTYFVFRHMYARYFCRLHTISSRPGTILHLCKLFEDLVQSRSPQVFYHAVEVGMPPLRVVFPWLFTAFSGYLAVDQVLTLWDRILAYDSLELLAILASAIFLFRSKSVLNATSSDEIRDIFEDGIYFRVMPLLQHFLF 551
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: W4FZ35_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZ35_9STRA) HSP 1 Score: 222 bits (566), Expect = 2.300e-62 Identity = 125/304 (41.12%), Postives = 177/304 (58.22%), Query Frame = 1
Query: 28 GRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYC-PPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFPAW 936
G K+L G P A +YA+ G +LRP +WR L + YF L ++V + +VTD L+ LDVQ +D YFPFE+ L V+LAFSRD V + TL V F S A PP V PF GLV + A LC+L+++ VYF R M+ R+WC+L + + P +L L K FE L+ RH P +VQ LLQ + PL +A PWIQ F LE DQVLLLWDR++GYDSL+++++ AA++ FR+ +LQV+ V ++F+D +++V+P+LQ F+FP +
Sbjct: 254 GDKVLSNGTVPTARQYAKTGSPITLRPHIWRQALSVAIDPI------YFKQLEAKVKASTVVTDGLFMLDVQQTTDSSDYFPFEDHLRSVMLAFSRDEQVASQAVMTLQHPV------------VFQSNASCSKMAIPPANVMPFHGLVMFVAPLCYLYDDPVHVYFVFRDMYCRYWCQLTGISARPNAILALCKTFETLIHRHIPAVVQHLLQHDIVPLVIAFPWIQSAFSGVLEIDQVLLLWDRVVGYDSLEIIAIFAAALFTFRSHELLQVTKIDDVKDLFTDALEIQVMPILQQFLFPIY 539
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A024TL93_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TL93_9STRA) HSP 1 Score: 217 bits (553), Expect = 1.680e-60 Identity = 123/307 (40.07%), Postives = 179/307 (58.31%), Query Frame = 1
Query: 28 GRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFPAW*TNG 948
G K+L+ G P A +YA+ G +LRP +WR L + YF L ++V TD L+ LDVQ +D YFPFE+ L V+LAFSRD V + TL V + A +G+ PP V P+ GLV + A LC+L+++ VYF R M+ R+WC+L + + P +L L K FE LV RH P +VQ LLQ + PL +A PWIQ F LE DQVLLLWDR++GYDSL+++++ AA++ FR+ +LQV+ V ++F++ +++V+P+LQ F+FP + +G
Sbjct: 247 GDKVLQNGTVPTARQYAKTGSPITLRPHIWRQALSVAIDPI------YFQQLEAKVRAMTFATDGLFMLDVQQTTDSSDYFPFEDHLRSVMLAFSRDEQVASQAVMTLQHPVLFHN----TNPTAEKTGSNVA--IPPANVMPYHGLVMFVAPLCYLYDDPVHVYFVFRDMYCRYWCQLTGISARPNSILALCKTFETLVHRHIPAVVQHLLQHEIVPLVIAFPWIQSAFSGVLEIDQVLLLWDRVVGYDSLEIIAIFAAALFTFRSHELLQVTKIDDVRDLFTEALEIQVMPILQQFLFPIFEPHG 541 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8301.19658.1 >prot_Ecto-sp13_S_contig8301.19658.1 ID=prot_Ecto-sp13_S_contig8301.19658.1|Name=mRNA_Ecto-sp13_S_contig8301.19658.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp MEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVTback to top mRNA from alignment at Ecto-sp13_S_contig8301:426..6164+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8301.19658.1 ID=mRNA_Ecto-sp13_S_contig8301.19658.1|Name=mRNA_Ecto-sp13_S_contig8301.19658.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5739bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8301:426..6164+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8301:426..6164+ >mRNA_Ecto-sp13_S_contig8301.19658.1 ID=mRNA_Ecto-sp13_S_contig8301.19658.1|Name=mRNA_Ecto-sp13_S_contig8301.19658.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8301:426..6164+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |