mRNA_Ecto-sp13_S_contig8301.19658.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8301.19658.1
Unique NamemRNA_Ecto-sp13_S_contig8301.19658.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: D7FT85_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT85_ECTSI)

HSP 1 Score: 587 bits (1512), Expect = 7.790e-203
Identity = 300/312 (96.15%), Postives = 302/312 (96.79%), Query Frame = 1
Query:    1 RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFPAW 936
            RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKA      LEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSE TLHDLVPIGEGAVGADDWAFLSGA AGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFE LVQRHHPRLV+KLLQLG+QPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAV EIFSDGRQLEVVPLLQAFMFPAW
Sbjct:  320 RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKAL-TPQDLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSEATLHDLVPIGEGAVGADDWAFLSGAGAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFESLVQRHHPRLVRKLLQLGLQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVMEIFSDGRQLEVVPLLQAFMFPAW 630          
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A6H5JP51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP51_9PHAE)

HSP 1 Score: 570 bits (1469), Expect = 6.740e-198
Identity = 299/330 (90.61%), Postives = 301/330 (91.21%), Query Frame = 1
Query:    1 RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENK---HHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQ---------------VLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFPAW 936
            RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKAS+       LEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSE TLHDLVPIGEGAVGADDWAFLSGA AGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFE    RHHPRLV+KLLQLGVQPLQLAMPWIQFGFVTYLEADQ               VLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAV EIFSDGRQLEVVPLLQAFMFPAW
Sbjct:  199 RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASKQALTPQDLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSEATLHDLVPIGEGAVGADDWAFLSGAGAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFE----RHHPRLVRKLLQLGVQPLQLAMPWIQFGFVTYLEADQASLCTTACSSSPCDLVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVMEIFSDGRQLEVVPLLQAFMFPAW 524          
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A836CJW0_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW0_9STRA)

HSP 1 Score: 302 bits (774), Expect = 3.350e-92
Identity = 167/315 (53.02%), Postives = 205/315 (65.08%), Query Frame = 1
Query:    1 RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENKH----HLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQ-PLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFP 930
            RF  ER + G   L  G   +   +ARRGV  +LRP +WR +LGLP A+ ++       E+   L+ EV R ELVTD LY LDV  I DDDKYF FEE L DV++AF+RD  V   +    H  +P      GA            G  PPCGVQPFRGLV+YAA LCFL+ ER  VY   R M+ R+WCRLNA+RS PG LL LL+LFE L++ HHP+L+ KL +LG+Q PL+LAMPWIQFGFV YLE  +VL LWDR+L YDSL LL  LAA+V VFR+  VL   DA AV + F+DG  L+ +PLLQAF+FP
Sbjct:  305 RFGDERRAAGEAALAGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPIPHRIAGAGAPR----------GTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLFP 609          
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: F0YBG1_AURAN (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBG1_AURAN)

HSP 1 Score: 288 bits (736), Expect = 9.230e-90
Identity = 153/314 (48.73%), Postives = 207/314 (65.92%), Query Frame = 1
Query:    1 RFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENKHHLE----YFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHD-LVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMF 927
            RF+ E  + G++ L  G  P A  YARRGV  SLRP ++R +LGLP     +   E    Y+A L + VD+ ELVTDEL+ +DVQ ++D+D YFPFEE L +V+LAFSRDPWVL +S    H  L    +       W      +AG   PPC VQPFRG V+Y A L F++E  E +Y+ LR M+A+FWC+LN +R+    LL L KLFE LV  +HP+L   L+Q+GV PL +A+PWIQFGFV  L+ DQVLLLWDR+LG++ L LL +LAA++ V+R++ +L  +    V ++FSDG  L+VVPL+Q F+F
Sbjct:   42 RFSDEWHALGKRCLARGHVPLARRYARRGVPPSLRPQIYRVLLGLPNVEHPQGCSEAEKAYYARLKAHVDKIELVTDELFQMDVQHVADNDYYFPFEEALGNVVLAFSRDPWVLHNSAVRTHARLAAKHKEPTDGPAW------KAGSAVPPCAVQPFRGFVSYTAPLTFVYEREEPIYYCLRAMYAKFWCKLNVMRTAECTLLPLCKLFEQLVIENHPKLFFYLVQIGVDPLAVALPWIQFGFVGLLDVDQVLLLWDRILGFEDLSLLPILAAAIFVYRSEKLLSATSLDDVKDMFSDGSILQVVPLIQTFLF 349          
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A8J2WGK4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WGK4_9STRA)

HSP 1 Score: 272 bits (695), Expect = 1.810e-81
Identity = 150/305 (49.18%), Postives = 194/305 (63.61%), Query Frame = 1
Query:   28 GRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASE----NKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFP 930
            G K L  G  P A  YARRGV  SLRPAV+R++LGLP   +    +     Y+  L   VD  ELVTDELY +DVQ ++DDD YF F+E L + +LAFSRD WV ++     H  +P         +   + G       PPCGVQPFRG V+YAA L F+F    ++YF  R  +A+ +CRLN +R+    LL L  LFE LV  HHPRL   L+Q+GV PL +A+PWIQFGFV  L+ +QVLLLWDRLLG++ L LLSVLAA++ V+R++ +LQ S      E+F+DG  LEVVPLLQ F++P
Sbjct:  230 GEKCLAEGHIPLARTYARRGVPPSLRPAVYRSLLGLPHMEDAQATSAFEERYYEDLRDRVDSIELVTDELYQMDVQHVADDDTYFIFDEMLGNCVLAFSRDSWVPKNCVVKTHAPLPC--------ENDLMKGQPV----PPCGVQPFRGFVSYAAPLTFVFGRETSLYFAFRAFYAQHFCRLNVLRTNQNTLLPLCALFERLVIEHHPRLFFYLVQVGVDPLAIALPWIQFGFVGLLDVEQVLLLWDRLLGFEDLALLSVLAAAIFVYRSEKLLQCSSLEEAREMFADGAVLEVVPLLQTFLWP 522          
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A7S3YGJ5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGJ5_HETAK)

HSP 1 Score: 255 bits (652), Expect = 2.940e-78
Identity = 137/284 (48.24%), Postives = 181/284 (63.73%), Query Frame = 1
Query:   64 AMEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQ 915
            A +YA++GV  +LR  +WR  LGL  +        +F  L+SE  R +L+TD+L+ +DVQFI+DDD+YF FE+ L D + AFSRD  VLR S+   H  +    G           G   G   PPCGVQPFRG  NY A LCFL+ +    Y   R ++ RFWCRLNAVR  PG LL L KLFE LV +  P    +L+ LGV PL + MPWIQFGFV +LE DQ+LLLWDR++G+ SL LL VLAAS+++FR+  +L+V  A  + ++F D  +L+VVPLL+
Sbjct:    1 ARQYAKQGVPTALRAGIWRCALGLRPSGAIAGESAHFRWLLSEGQRIDLITDDLFEMDVQFIADDDRYFVFEDMLRDCVGAFSRDAQVLRGSDVLPHQPLVGHHG----------EGQAPGTAVPPCGVQPFRGFCNYLAPLCFLYHDAPTCYGVARALWCRFWCRLNAVRGRPGTLLPLCKLFEDLVLQGAPDAFARLVALGVSPLSIVMPWIQFGFVGFLEPDQILLLWDRIIGFQSLHLLPVLAASIIMFRSHNILKVDSADGLRDLFQDITRLKVVPLLR 274          
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A7S2H1X2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H1X2_9STRA)

HSP 1 Score: 253 bits (645), Expect = 2.150e-76
Identity = 140/317 (44.16%), Postives = 194/317 (61.20%), Query Frame = 1
Query:    4 FTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSE-TTLHDLVPIGEGAVGADDWAFLSGAEAGG------YCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFPA 933
            F  +   +G  +++ G+ P   ++AR GV  +LRP +WR +LGL K+       +++A L SEV R E  TD L  +DV   SD + YFPFE+ L  V+LAFSRD WV   S   T H L+   +     D  +     + GG        PP GV PF+GL++YAA L  LFEE +AV+   R M+AR+WCRLN +R+  G LL L  LFE L+Q H PRL   L + G+QPL +A+PWIQF FV  L+  QVL+LWDR+LG+D L LL VLA ++ +FR+  V+ ++D A + E+F +G +L V PLLQ  +FP+
Sbjct:   19 FVGQAQKRGHSLIQDGYIPAVRQFARTGVCVALRPRMWRIMLGL-KSDVTAGESDHYAKLTSEVQRVEYATDGLLEMDVSQSSDLENYFPFEDLLKSVVLAFSRDAWVRGMSMFQTHHPLIDPAD----LDSTSTSPERDKGGRSNCLKMVPPSGVLPFKGLMSYAAPLTLLFEEEDAVFSVFRAMYARYWCRLNVLRTAEGTLLPLCHLFEELLQCHDPRLFFHLTRSGIQPLAIALPWIQFAFVGLLDPGQVLVLWDRILGFDDLALLPVLACAIFIFRSPTVMGIADKAGIEEVFLEGTELRVAPLLQHLVFPS 330          
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A0G4ISX4_PLABS (Rab-GAP TBC domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4ISX4_PLABS)

HSP 1 Score: 226 bits (575), Expect = 1.440e-63
Identity = 136/336 (40.48%), Postives = 196/336 (58.33%), Query Frame = 1
Query:    4 FTAERLSQGRKILKAGFAPEA--MEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPI-----GEGAV-GADDWAFLSGAEAGGYC--------------------PPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMF 927
            F  +R  +G ++L       A  M YA+ GV  SLRP  W+ ILG+  +  +   + Y+  L+++V R EL+TD+LY L+VQ  +D+  YF FE+ L +++LAFSRD W+ ++S   L  L P+      E AV G DD A    A+A G                      PPCGV PF   V  AA LC+LF+  E  YF  R M+AR++CRL+ + S PG +L L KLFE LVQ   P++    +++G+ PL++  PW+   F  YL  DQVL LWDR+L YDSL+LL++LA+++ +FR+K VL  + +  + +IF DG    V+PLLQ F+F
Sbjct:  220 FRNQRYVEGERLLNDAQTTVADLMRYAQTGVPASLRPRFWKRILGVWTSDRD---VAYYERLITQVRRWELITDDLYRLEVQETTDNAAYFVFEDMLDEIMLAFSRDSWLPKNSTLPLC-LAPLTTNVFSEAAVPGRDDGAGYPFADANGKLSPSLVENSGIEIDDQGTATIPPCGVVPFHHQVMLAAPLCYLFQRCEHTYFVFRHMYARYFCRLHTISSRPGTILHLCKLFEDLVQSRSPQVFYHAVEVGMPPLRVVFPWLFTAFSGYLAVDQVLTLWDRILAYDSLELLAILASAIFLFRSKSVLNATSSDEIRDIFEDGIYFRVMPLLQHFLF 551          
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: W4FZ35_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZ35_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.300e-62
Identity = 125/304 (41.12%), Postives = 177/304 (58.22%), Query Frame = 1
Query:   28 GRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYC-PPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFPAW 936
            G K+L  G  P A +YA+ G   +LRP +WR  L +           YF  L ++V  + +VTD L+ LDVQ  +D   YFPFE+ L  V+LAFSRD  V   +  TL   V             F S A       PP  V PF GLV + A LC+L+++   VYF  R M+ R+WC+L  + + P  +L L K FE L+ RH P +VQ LLQ  + PL +A PWIQ  F   LE DQVLLLWDR++GYDSL+++++ AA++  FR+  +LQV+    V ++F+D  +++V+P+LQ F+FP +
Sbjct:  254 GDKVLSNGTVPTARQYAKTGSPITLRPHIWRQALSVAIDPI------YFKQLEAKVKASTVVTDGLFMLDVQQTTDSSDYFPFEDHLRSVMLAFSRDEQVASQAVMTLQHPV------------VFQSNASCSKMAIPPANVMPFHGLVMFVAPLCYLYDDPVHVYFVFRDMYCRYWCQLTGISARPNAILALCKTFETLIHRHIPAVVQHLLQHDIVPLVIAFPWIQSAFSGVLEIDQVLLLWDRVVGYDSLEIIAIFAAALFTFRSHELLQVTKIDDVKDLFTDALEIQVMPILQQFLFPIY 539          
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Match: A0A024TL93_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TL93_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.680e-60
Identity = 123/307 (40.07%), Postives = 179/307 (58.31%), Query Frame = 1
Query:   28 GRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVPIGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQLGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFPAW*TNG 948
            G K+L+ G  P A +YA+ G   +LRP +WR  L +           YF  L ++V      TD L+ LDVQ  +D   YFPFE+ L  V+LAFSRD  V   +  TL   V         +  A  +G+      PP  V P+ GLV + A LC+L+++   VYF  R M+ R+WC+L  + + P  +L L K FE LV RH P +VQ LLQ  + PL +A PWIQ  F   LE DQVLLLWDR++GYDSL+++++ AA++  FR+  +LQV+    V ++F++  +++V+P+LQ F+FP +  +G
Sbjct:  247 GDKVLQNGTVPTARQYAKTGSPITLRPHIWRQALSVAIDPI------YFQQLEAKVRAMTFATDGLFMLDVQQTTDSSDYFPFEDHLRSVMLAFSRDEQVASQAVMTLQHPVLFHN----TNPTAEKTGSNVA--IPPANVMPYHGLVMFVAPLCYLYDDPVHVYFVFRDMYCRYWCQLTGISARPNSILALCKTFETLVHRHIPAVVQHLLQHEIVPLVIAFPWIQSAFSGVLEIDQVLLLWDRVVGYDSLEIIAIFAAALFTFRSHELLQVTKIDDVRDLFTEALEIQVMPILQQFLFPIFEPHG 541          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8301.19658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT85_ECTSI7.790e-20396.15Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JP51_9PHAE6.740e-19890.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJW0_9STRA3.350e-9253.02Rab-GAP TBC domain-containing protein n=1 Tax=Trib... [more]
F0YBG1_AURAN9.230e-9048.73Rab-GAP TBC domain-containing protein (Fragment) n... [more]
A0A8J2WGK4_9STRA1.810e-8149.18Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3YGJ5_HETAK2.940e-7848.24Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S2H1X2_9STRA2.150e-7644.16Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0G4ISX4_PLABS1.440e-6340.48Rab-GAP TBC domain-containing protein n=1 Tax=Plas... [more]
W4FZ35_9STRA2.300e-6241.12Rab-GAP TBC domain-containing protein n=2 Tax=Apha... [more]
A0A024TL93_9STRA1.680e-6040.07Rab-GAP TBC domain-containing protein n=1 Tax=Apha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8301contigEcto-sp13_S_contig8301:426..6164 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score549.7
Seed ortholog evalue8.4e-154
Seed eggNOG ortholog2880.D7FT85
Preferred nameTBC1D19
Model size1541
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005096,GO:0008047,GO:0008150,GO:0030234,GO:0030695,GO:0043085,GO:0043087,GO:0043547,GO:0044093,GO:0050790,GO:0051336,GO:0051345,GO:0060589,GO:0065007,GO:0065009,GO:0098772
Exons8
EggNOG free text desc.GTPase activator activity
EggNOG OGs28K1A@1,2QSFR@2759
Cds size873
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8301.19658.1prot_Ecto-sp13_S_contig8301.19658.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8301 492..5371 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464100.7493713-UTR-Ecto-sp13_S_contig8301:425..4911681464100.7493713-UTR-Ecto-sp13_S_contig8301:425..491Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8301 426..491 +
1681464100.8467407-UTR-Ecto-sp13_S_contig8301:5371..57231681464100.8467407-UTR-Ecto-sp13_S_contig8301:5371..5723Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8301 5372..5723 +
1681464100.8611166-UTR-Ecto-sp13_S_contig8301:5914..61641681464100.8611166-UTR-Ecto-sp13_S_contig8301:5914..6164Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8301 5915..6164 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464100.7630136-CDS-Ecto-sp13_S_contig8301:491..5851681464100.7630136-CDS-Ecto-sp13_S_contig8301:491..585Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8301 492..585 +
1681464100.7742133-CDS-Ecto-sp13_S_contig8301:1189..13081681464100.7742133-CDS-Ecto-sp13_S_contig8301:1189..1308Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8301 1190..1308 +
1681464100.7854896-CDS-Ecto-sp13_S_contig8301:1752..19261681464100.7854896-CDS-Ecto-sp13_S_contig8301:1752..1926Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8301 1753..1926 +
1681464100.7963736-CDS-Ecto-sp13_S_contig8301:2645..28101681464100.7963736-CDS-Ecto-sp13_S_contig8301:2645..2810Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8301 2646..2810 +
1681464100.8069172-CDS-Ecto-sp13_S_contig8301:3813..39361681464100.8069172-CDS-Ecto-sp13_S_contig8301:3813..3936Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8301 3814..3936 +
1681464100.818216-CDS-Ecto-sp13_S_contig8301:4705..48071681464100.818216-CDS-Ecto-sp13_S_contig8301:4705..4807Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8301 4706..4807 +
1681464100.828903-CDS-Ecto-sp13_S_contig8301:5275..53711681464100.828903-CDS-Ecto-sp13_S_contig8301:5275..5371Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8301 5276..5371 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8301.19658.1

>prot_Ecto-sp13_S_contig8301.19658.1 ID=prot_Ecto-sp13_S_contig8301.19658.1|Name=mRNA_Ecto-sp13_S_contig8301.19658.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp
MEYARRGVADSLRPAVWRAILGLPKASENKHHLEYFAGLMSEVDRTELVT
DELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSETTLHDLVP
IGEGAVGADDWAFLSGAEAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREA
VYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFEFLVQRHHPRLVQKLLQ
LGVQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVL
VFRAKLVLQVSDAAAVTEIFSDGRQLEVVPLLQAFMFPAW*
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mRNA from alignment at Ecto-sp13_S_contig8301:426..6164+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8301.19658.1 ID=mRNA_Ecto-sp13_S_contig8301.19658.1|Name=mRNA_Ecto-sp13_S_contig8301.19658.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5739bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8301:426..6164+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGTTCACGGCGGAGAGACTGTCGCAAGGCCGAAAGATCCTCAAGGCCGG CTTTGCGCCGGAGGCGATGGAGTACGCCAGGAGAGGGGTGGCCGACTCGC TCCGACCGGCGGTGTGGAGGGCGATACTCGGGCTCCCAAAGGCAAGCGAA AACAAGCACCGTAGTGCTACATACACGATACCCAACATGATCTTTGGGGG GCATTCGGCCTGTGAAGGCGAAGAAACTCGCCCACTGTTCAGCTATAGCC GTCCCCGAACCCAAGCCATCCCCGATTCCGTCACAAGCGAGCTGTTCTTC AAGTCCAACACCTGCGCACGGCAATACCCACAAACTTTTCGTGAAATTGG GCCAGGAGCAGTCATCGCGGACTGCTCCAAACCCGATCCTCAAGCTAGAG AATATCGTGGCGCAAGGCTTAAAACGCAAATACTCACTTCTGGCTATTTC GTTTCCCTAAGTCATTCTTCTACTTTGTCCTTGCTCCATTTTACGGCTGG ACATTTGCTACTATAATAGTGGCTGTTCTTGTAACATGTTCCGGCCCAAC ATCGCGCCGTTAGTGCTGTACCGAACTGCTGTTGCCATCCTTCCTCCTGA TGCGACGTACCGCAGCCTGTTTATTGTGACTCTGATCAAACGCTCAGGAT ATGTCCTACTTTTCTGTCTTCTTACTCGCCGCAACTGCCCATCTCGCTGC CGCTGGCACCTCTGGCACCGCTGGTGCCGCCGCACCGTACCGTCGCAGGC GCTGACCCCGCAAGACCTGGAGTATTTCGCAGGCCTCATGTCGGAGGTGG ACCGGACGGAGCTGGTGACCGACGAGCTGTACGGCCTGGACGTGCAGTTC ATCAGCGACGACGACAAGTACTTCCCCTTCGAGGTATCTATCGACAGTGT TTTGCACGCGACAGAGCTATGTCGAGCGTTCAAGTGAAGCTTGCAAACGA TTGACAGGTCTGTAGGGTACATAGTCTACAGCTAGTTATGATTTGGTGAA TGTTTCGGTGCTTTCGTGGGTTGGAAACGTTAGGAGTGAGTCAGCCGACC TAGGATTTGTTGTTTTACGGACCACAGCTTGGTTTTCACCAACTGACGGC CGCTGGCACCTAACACTTGGTACAGGGCCGACCCATTTGCTGCTGTGACT TCCACAAGACTAGCAAAGGTATCGTCGTTCCTACGCCACGACACCGAAAG GTGCCCCTCCTGTTTCCACTTTCCGCTACCTTACCCGTGGTTATTTTCCT TCCCATCATCCCTCCTGTTCCCCGTGGTACTTACGGTCACTTTCTGCCCC GGCATGGAACGCATGCCTTACCGCCAGGAAACCTTGCACGACGTCATCCT GGCATTCTCAAGGGACCCTTGGGTCCTCCGGCACAGCGAAACCACCCTTC ACGACCTCGTCCCTATCGGGGAAGGAGCGGTGGGGGCTGACGACTGGGCA TTTTTGAGCGGTGCGGAGGCTGGGGGCTATTGTCCCCCGTGCGGTGTGCA GGTGGGCCTTTGTGCTTCTTGGTGCGTGTTTTGCTTTCGGTCTTTGTGAG CATGTTTCCCCGCCAGGTATTGCTGTTGTGCATACCATAGCATTTTGTAC ATTTTCATACACAGCAGTGATTCGACCGTCGGGCTTGCTGTGTAACCTTT TTTACACTGTGTCGGCGTTCGTTCGCGTCTCCTCATGAAACGAAAGAACA TCAAATGCACACAACGAGACGGATATACTGGGGAAAACTTGTTGTTGTTC TCAGGCGAAACATATTTTGTTGATTTCGGCAGTTACTGTCTATGTACGTA AGCTTTTCATCAATTGTAGTGGAAGGGGGGAAGAGCATGGAAGAGAGCAC TGTGCGTGCTTCCCAGAGGGCCGTGAATCATCAGCCCGGAGCCCGAGGGC AGCGCCAGTTCCCATCAGCGACACCACATGAAAAAACGGCACAGCTGGTA TACCTGGACCACTAGGTTTCCATTTCCACATGAAGGAATACAACTCCAAC TCGAAGCTGTAGACGTGATGCCTACACAATAAGAACATAGGCTGCAACGT TTCATGGGTTGGCGTTATTTTGTACTACTTCTAGAGGAAAGCCATTCAAT TCCAGGAGATGTTTGTTCCTGGCAAGAAGACACGGACAATCCGTGACAAA TAGAAAAATGAAGAAGCCTGTGAACCTTCCCCCCCCCCGCTGTTATTCCC CCCGCCCTTCCCCCCAAAAGCCATTTCGGGGGCTCGTGAACTACGCGGCA GTACTGTGCTTCTTGTTCGAAGAGAGGGAGGCTGTGTATTTCACTCTCAG GACCATGTTCGCCAGGTTCTGGTGCAGGCTGAACGCCGTGCGCTCCGGCC CCGGCATGCTGCTCCGCCTGCTCAAGCTCTTCGAGGTGGGTGTGTTAAAT GTCATGTGTCTCTTTGTCTCGTCTCGCGTTCACTGCCTGAGAAGAACGAA CTTTGCTGTAATCGTTCTCTTTTGGTGTCGTGGGGACACCAATTGTACAG CAGTATCAGCCGATTCACGAAAGTCTGTTGCGCGAAAGTCAGGCCGAGGT GCTGAAATCCCTACGAGAGCGTCGGGTTACCCTTGGCGGCGCGCTGGTGC ACGAATTCCATAGAAGTGGCTGATGCTCGACCTTCGCGGAACAAAACCAA CGTCACGCCTAGCCTGGTAGGGTCAGCTACAACTACGCCGACACCTCGGT GTTTGATAATAAGTGCGTCGTGACCGGCGACCCGTTCTTGCCTGTCCTGA GATTATTTGGCAAAGCGCCATGCTGTGTGTATGGAATGGGGGTATATCTG GCACTGCATTGCTGCCTGCTCAAGCTGTTTTCCCGAGTGTAGTCAAATCC AAATCAAGGATGCATACTTGAGTGTTTGTTGAATCCGGAACTTGTTGTAC GTGTTCCGCGAGCTATCCTAGTTTTTCAGCTGGCCTCTTTTTGTTTTTGT GGGGACAACATTGCGGTCTCAATGTCCTGACTTTGTGGCCAGTACGAAGT TCGAGGGCAGGCAGGGTGTTGCGGTGTTCATTCTCTAAGCGTTTCATTTC AGGTCGGCGCTCGAAGAGTACACGCCTGCTGGCTAGCGATGCGTACAAAC GAGAGTATTAAGCAGTGCAGCGTAGAGAAATACGTAACTTCGAGTACGTT TTGTCGCAGATGGCGATGGTGAGGCGGTAATTGCTCCACTTTCCCTGTCC GTATGCACCCATAAAAATGTTTTGTGTCGTCCGCTGATTATTTCTCATCT TCACAGGCCACATTGGTGTGCGTGCCTGCCCCTCCCCTGCGATCCTTCCG ATAGTGAGCCGGGTGTCGTCGTCTCGCTCTTTCGGTCCAACATGTCCGTT TTTAACCTCGTGTGACCTCGGTGGCTGCGTGTTTCCAGTTTCTGGTGCAG CGGCACCACCCGCGGCTCGTGCAGAAGCTGCTGCAGCTGGGCGTACAGCC GCTGCAGCTAGCCATGCCCTGGATACAGTTCGGCTTCGTGACCTACCTGG AGGCAGACCAAGCAAGTTTACGCACCACAGCGTGTAGCTCTTCGCCCTGT GACCTGATTGTTGCGCCGCCGAGTGCCCCCAATGAGGAAGGAATATTGTG ATCTTGAGGATTGTTTTTCTGAAAGGCGTATGCTTACTGCGAGCTTCTCG AGAAAAATTGTCTCCGTTAGTAGTTCGGACTTGGACGACCCGGCCGGCTC CGTGAAACCTTGACCGTAATATATACCCGGACCAGACACCACACTTTTGT ATCCGCGTCACACGACGTTTCCCGACAGTTAAGAGGGTGCTGGAACGTAT CCACCGGAGGCGCCAATTGATATTATGGACGTATCGAGAGGTGTATTTCG TTCCGTCATGCACGAGTGCAAGGGAACCACCTTTCCATCCGCGTATGAGT AACCGCATGACTACACGGCCGAAGTAGAGACCAATGTTAAGGCTCTTCAG TGCGTCCTACCCACTCCCGCTTGTTGCACACCACCGTGGGCGTGGAAAAC CCAATCAGTCATAGCGGTGGGTAGCGATGCACACGGTGTGGTACAAGCTG TAGCAAATACCCCGTGCTCCAGGTGTTGCCGTCGATTTTGCTACTCTTGG GTGATTTCGTCCGGCTCACCACAGTGAACATCATGGAGGCGAGGTGTCGG GAGAGAAGCGATCGCTCTCCCGACCGTGGATGGGGATAGGAAATGAACGT GCGAAACAAGAAGTATGCACCTCCCTGAGTGCACCGACTAACACTGCCCT TGCGGTGGTTATTTACGTCAACGAACGCAGGTGCTGCTGCTGTGGGATAG ACTGCTGGGGTACGACTCCCTCGATCTCTTGTCGGTTCTCGCCGCCTCGG TGTTGGTGTTTAGAGCAAAGCTGGTGCTGCAGGTGAGCACATGGTTTCGC TCACGCGGCAGAGGCGAACCCCTCTCCTTCTGGTGAGGTTCAACGTGCGG CCAAGGGAAGTACGGTTTCGGTACTGTTTCAGTTGTAGATCTTTTCTCGC CTGTGACCGTTGCGAATTGAAGTCGTTCGGACCCGTCGACGAAAGTGGGT GCTGCGGCTCGCTCACGTTGTCGTTCGGAGCTGTCTATAGGTAACATGCG TGTGTTTTGATTGGCGTGCATTGCTTTTGTCTTCGCTTTTTCCGGGGAAA ATTGATCTCTCTCTGTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCACCAT GTAATCCACGTTGTGTTCCCATATCCGACGATTTTGATTTTAATGCAGCA GATATGTAGATGGTACATATGGGACGCCGATTCGTAGTGTTTTCCACGGA CCTGACCGACTGACGTTCTCAATTACGATTTATTTATTCTTCTCGTGTAG GTTTCGGACGCTGCTGCGGTGACGGAGATATTCTCAGATGGGCGACAACT GGAAGTCGTGCCGCTTCTCCAGGCCTTCATGTTTCCGGCGTGGTAAACCA ATGGAGTGAAATCGATGACCAAAGTACGCCACTTGGAGTTGCGTGGAAGC TTGCATTTTCCTCGTTTTGCGCAGTCTCGTTTGCTGCTGTAGATGGTTCT ACGCTTGGCCGTTAGTGACGTTTGTTTTTTTGGGAAGTACTCATTTTCTA GAGGCGCTAAGATGTCTCGTGTGTCCACTCATTTGTTGGGAGGAATGACA GCACTTGCAAACCTCGCAATGACTTCCAGTCGAAACACTTTTTGTTCCTT CTTGGGTGGTCTTGAGCTGAGCTAAACCGCTCTTTCCAGCAGACCTGTTG TCTTGGATCGGTTGCGCTTGGCGCCGTGGGGAACATACCGCGCATGTGGT TTCATTGTTCGAACCAGAACAAATGAGAGCTTGGTATAGCCGGTGGTGCT TCAATAGCGGCGACCGCTGTTTGCACCCGTGTTTGGCTTTCTATGGTATT GGCCTGGGTAGGAGGTGCCCGACCGGCTGGCAATGGTATGTTGTGAAGCT CTTGCGTGTGTTCATAAACGATCTGCTACGCGGTACCAGGTTTGTTGCAT CTCGCTTGTACGTACTTCGAAGTACATAGTTTGAGGCGCATCACATTCAC AGCTCTGAGAGGGCTGTAGCAGCGGTGGAGCGGGCGAATGATCTTGCTAC GGATTTCGGCTGTGAAGTTGATGAAGGAAGCACATCTTGTGAAAATGCCA GTCCCGACAAGTGTTAAGGTAAAGGTATGTAACGGATGAATAAGCGTTTG TGATTGGAACCCGCAGTACTCCTTGAACGTCCTGCAGTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8301:426..6164+

>mRNA_Ecto-sp13_S_contig8301.19658.1 ID=mRNA_Ecto-sp13_S_contig8301.19658.1|Name=mRNA_Ecto-sp13_S_contig8301.19658.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8301:426..6164+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGTACGCCAGGAGAGGGGTGGCCGACTCGCTCCGACCGGCGGTGTG
GAGGGCGATACTCGGGCTCCCAAAGGCAAGCGAAAACAAGCACCACCTGG
AGTATTTCGCAGGCCTCATGTCGGAGGTGGACCGGACGGAGCTGGTGACC
GACGAGCTGTACGGCCTGGACGTGCAGTTCATCAGCGACGACGACAAGTA
CTTCCCCTTCGAGGAAACCTTGCACGACGTCATCCTGGCATTCTCAAGGG
ACCCTTGGGTCCTCCGGCACAGCGAAACCACCCTTCACGACCTCGTCCCT
ATCGGGGAAGGAGCGGTGGGGGCTGACGACTGGGCATTTTTGAGCGGTGC
GGAGGCTGGGGGCTATTGTCCCCCGTGCGGTGTGCAGCCATTTCGGGGGC
TCGTGAACTACGCGGCAGTACTGTGCTTCTTGTTCGAAGAGAGGGAGGCT
GTGTATTTCACTCTCAGGACCATGTTCGCCAGGTTCTGGTGCAGGCTGAA
CGCCGTGCGCTCCGGCCCCGGCATGCTGCTCCGCCTGCTCAAGCTCTTCG
AGTTTCTGGTGCAGCGGCACCACCCGCGGCTCGTGCAGAAGCTGCTGCAG
CTGGGCGTACAGCCGCTGCAGCTAGCCATGCCCTGGATACAGTTCGGCTT
CGTGACCTACCTGGAGGCAGACCAAGTGCTGCTGCTGTGGGATAGACTGC
TGGGGTACGACTCCCTCGATCTCTTGTCGGTTCTCGCCGCCTCGGTGTTG
GTGTTTAGAGCAAAGCTGGTGCTGCAGGTTTCGGACGCTGCTGCGGTGAC
GGAGATATTCTCAGATGGGCGACAACTGGAAGTCGTGCCGCTTCTCCAGG
CCTTCATGTTTCCGGCGTGGTAA
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