prot_Ecto-sp13_S_contig10169.196.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10169.196.1
Unique Nameprot_Ecto-sp13_S_contig10169.196.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length324
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10169.196.1 vs. uniprot
Match: D8LRP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP3_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 1.120e-118
Identity = 192/236 (81.36%), Postives = 206/236 (87.29%), Query Frame = 0 
Query:   86 MPLAVLAGHSTLVSIKGIVFDVSDDEAYNHEGALAGCAGHDASRVIAAPAGGRLGNGDGGGKLDAGLEGLRYEEHQRLEAYFVELARSRRAVAVLADEDHISIFGTPLVASGETGYIPAAATAASAFSISTKTDDVKALVAEVHASVEQGDAEALRKVLSSRCQQHPGEEVEDDGEDADGDSAQTGETQPKTLLVPVDSACPRTGMSPLLKAVEGGSAEVIRVLLDAGADVRMQAS 321
            MPLAVLAGH TLVS+KGIVFDVSDDEAYNHEGALAGCAGHDASRVI A AG R G GDGGGKLDAGLEGLRYEEHQRLEAYFVELARSRRAVAVL DED+ISIFGTPLVASG+TGY PAAAT ASA +I+T+T++VKALVA +HASVEQGDAEA+R VLSSR QQ PGEEVED G DADGDSAQ  ETQPK+LLVPVDSACPRTGMSPLLKAVEGGSA+      D   D+  + S
Sbjct:    1 MPLAVLAGHPTLVSVKGIVFDVSDDEAYNHEGALAGCAGHDASRVIGASAGSRRGYGDGGGKLDAGLEGLRYEEHQRLEAYFVELARSRRAVAVLTDEDYISIFGTPLVASGDTGYTPAAATTASALAINTQTNNVKALVAVLHASVEQGDAEAVRNVLSSRYQQPPGEEVEDAGGDADGDSAQIEETQPKSLLVPVDSACPRTGMSPLLKAVEGGSAKAALYDGDTALDLARRLS 236
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BLAST of mRNA_Ecto-sp13_S_contig10169.196.1 vs. uniprot
Match: A0A7S2RSP5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSP5_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.520e-11
Identity = 56/151 (37.09%), Postives = 79/151 (52.32%), Query Frame = 0 
Query:   53 KAAAITCPLGFGGGAN------DTGRPTAASFAKRGLPRMPLAVLAGHS-------TLVSIKGIVFDVSDDEAYNHEGALAGCAGHDASRVIAAPAGGRLGNGDGGGKLDAGLEGLRYEEHQRLEAYFVELARSRRAVAVLADEDHISIFG 190
            KA A TCPLGFGGG++              + A + LP M LA L  H+         VS+KG VFDV+ D+       L+ C G D SR++A      +G+ D    L+  L GL YE+HQRLEA++   +   + VA L+ E++  +FG
Sbjct:   64 KAEAPTCPLGFGGGSSAQXXXXXXXXXXGQAQAHQELPEMSLAALGRHNGKIPRMPKFVSVKGSVFDVTQDKESFGVPPLSDCCGSDVSRILA------VGSFDPN-LLNQSLAGLTYEQHQRLEAFYHMFSGRFKPVARLSAENYEQLFG 207
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10169.196.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRP3_ECTSI1.120e-11881.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2RSP5_9STRA1.520e-1137.09Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 289..318
e-value: 0.0043
score: 26.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 289..321
score: 11.995
IPR036400Cytochrome b5-like heme/steroid binding domain superfamilyGENE3D3.10.120.10coord: 87..180
e-value: 1.3E-5
score: 27.2
IPR036400Cytochrome b5-like heme/steroid binding domain superfamilySUPERFAMILY55856Cytochrome b5-like heme/steroid binding domaincoord: 95..133
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 289..321
score: 11.957

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10169contigEcto-sp13_S_contig10169:1755..3202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10169.196.1mRNA_Ecto-sp13_S_contig10169.196.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10169 1755..3202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10169.196.1 ID=prot_Ecto-sp13_S_contig10169.196.1|Name=mRNA_Ecto-sp13_S_contig10169.196.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=324bp
MSGGTCPFAAQWQRSQPTGTTAPTCPVGSGSPPPHPTTGASSSATATATA
TTKAAAITCPLGFGGGANDTGRPTAASFAKRGLPRMPLAVLAGHSTLVSI
KGIVFDVSDDEAYNHEGALAGCAGHDASRVIAAPAGGRLGNGDGGGKLDA
GLEGLRYEEHQRLEAYFVELARSRRAVAVLADEDHISIFGTPLVASGETG
YIPAAATAASAFSISTKTDDVKALVAEVHASVEQGDAEALRKVLSSRCQQ
HPGEEVEDDGEDADGDSAQTGETQPKTLLVPVDSACPRTGMSPLLKAVEG
GSAEVIRVLLDAGADVRMQASVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036400Cyt_B5-like_heme/steroid_sf
IPR020683Ankyrin_rpt-contain_dom