mRNA_Ecto-sp13_S_contig8298.19647.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8298.19647.1 vs. uniprot
Match: D7G6D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6D5_ECTSI) HSP 1 Score: 231 bits (589), Expect = 2.120e-76 Identity = 114/120 (95.00%), Postives = 116/120 (96.67%), Query Frame = 1
Query: 1 SVALWMDLEEIFSLPFGVGEKMKDAADSIPRARQGDDLEYFLPPIARPKVKVPARHYFVFGPAIDTSLVDEKDRGTCQAAYELTKSCVREGISFLLESRKQDPYRDGAKRWLYESVMKTQ 360
SVALWMDLEEIFSLPFGVGEKMKDAAD+IPRARQGD+ EYFLPPIARPKV PARHYFVFGPAIDTSLVDEKDRGTCQAAYELTKSCVREGIS LLESRKQDPYRDGAKRWLYESVMKTQ
Sbjct: 2 SVALWMDLEEIFSLPFGVGEKMKDAADAIPRARQGDNQEYFLPPIARPKV--PARHYFVFGPAIDTSLVDEKDRGTCQAAYELTKSCVREGISLLLESRKQDPYRDGAKRWLYESVMKTQ 119
BLAST of mRNA_Ecto-sp13_S_contig8298.19647.1 vs. uniprot
Match: B8BRN2_THAPS (AB hydrolase-1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRN2_THAPS) HSP 1 Score: 99.8 bits (247), Expect = 7.480e-22 Identity = 53/130 (40.77%), Postives = 80/130 (61.54%), Query Frame = 1
Query: 1 SVALWMDLEEIFSLPFGVGEKMKDAADSIPRARQG--DDLEYFLPPIARPKVKVPARHYFVFGPAIDTSLVDEKDRGTCQAAYELTKSCVREGISFLLESRKQDPYR-DGAKRWLYESVMKTQAPTFPLD 381
SV + +D +E+ LPFG+G+ +K+ + AR D E F+PP+A PK PARHYF+FG A DTS +D +++ CQ YE ++ +R I LL +R++DP+ DG KR Y+ + PTFP++
Sbjct: 712 SVDIVLDAKELLDLPFGIGDNLKNFNANATSARYDTQDGEELFVPPLAVPK-PFPARHYFLFGRAFDTSSIDPQNKDACQTMYEEIENELRSDIDALLAARERDPFALDGGKRAWYQRLFGKDPPTFPVE 840
BLAST of mRNA_Ecto-sp13_S_contig8298.19647.1 vs. uniprot
Match: A0A2P6TRL1_CHLSO (Acyltransferase chloroplastic n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TRL1_CHLSO) HSP 1 Score: 92.8 bits (229), Expect = 1.970e-19 Identity = 56/133 (42.11%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 1 SVALWMDLEEIFSLPFGVGEKMKDAADSIPRARQGD-----DLEYFLPPIARPKVKVPARHYFVFGPAIDTSLVDEKDRGTCQAAYELTKSCVREGISFLLESRKQDPYRDGAKRWLYESVMK-TQAPTFPLD 381
S+ + D +++ ++P +G+ +K A +P+AR+G + E F+ P+A PK+ P R YFVF I TS D KDR C Y TK+ V EGI++LL+ RKQDPY + R LYE+ + QAPTFPL+
Sbjct: 589 SLNIIADSQQLEAMPV-LGDMVKRRAGGLPQARKGVAAASFEEESFVAPLATPKLP-PGRLYFVFQQPIQTSPEDLKDRQRCDDMYRATKASVEEGIAWLLQKRKQDPYGEFLPRQLYEAAYRGRQAPTFPLN 719
BLAST of mRNA_Ecto-sp13_S_contig8298.19647.1 vs. uniprot
Match: A0A7S4J8V7_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J8V7_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 2.370e-17 Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 37 SLPFGVGEKMKDA-ADSIP-RARQGDDLEYFLPPIARPKVKVPARHYFVFGPAIDTSLVDEKDRGTCQAAYELTKSCVREGISFLLESRKQDPYRDGAKRWLYESVMKTQAPTFPL 378
S+PFG+G + D D +P AR E P+ PK VPARH ++F + VD +DRG C+ Y K +R GI LL + ++DPYRD A+R +YE V + QAPTFPL
Sbjct: 347 SVPFGLGNAVADLMGDDVPFDARWDRGGETISLPLVVPK-PVPARHGYLFHAPMRLDGVDHRDRGACREVYRRVKEEIRGGIRDLLRAAERDPYRDSARRLVYERVWRKQAPTFPL 461
BLAST of mRNA_Ecto-sp13_S_contig8298.19647.1 vs. uniprot
Match: A0A7S0VIS5_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VIS5_9CRYP) HSP 1 Score: 55.8 bits (133), Expect = 1.700e-6 Identity = 35/101 (34.65%), Postives = 51/101 (50.50%), Query Frame = 1
Query: 73 AADSIPRARQGDDLEYFLPPIARPKVKVP-ARHYFVFGPAIDTSLVDEKDRGTCQAAYELTKSCVREGISFLLESRKQDPYRDGAKRWLYESVMKTQAPTF 372
AA + D L + PI PK +R YF+FG I T ++ KD C Y + V +S+LL++R+ DPY++ + R LYE+ APTF
Sbjct: 689 AAGRSSESSSSDRLAFKDLPIVVPKPPWEVSRTYFMFGSPIRTQGINVKDAEECAGVYTKVQGEVNGILSYLLDNRENDPYKELSARLLYETQNARSAPTF 789
BLAST of mRNA_Ecto-sp13_S_contig8298.19647.1 vs. uniprot
Match: M2XSE0_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XSE0_GALSU) HSP 1 Score: 55.5 bits (132), Expect = 2.350e-6 Identity = 44/132 (33.33%), Postives = 64/132 (48.48%), Query Frame = 1
Query: 16 MDLEEIFSLPFGVGEKMKDAADSIPRARQGD------------DLEYFLPPIARPKVKVPARHYFVFGPAIDTSLVDE--KDRGTCQAAYELTKSCVREGISFLLESRKQDPYRDGAKRWLYESVMKTQAPT 369
+D EE+ LP VG M ++ S+ +GD DL F+ P++ P+ P R YF F ID+ L K+R + Y + V GI +LL+ RK+DP+ KR ++ESV APT
Sbjct: 780 LDGEELIQLPL-VGRLM-ESLFSLSDMPKGDVVREWKGPLNKQDLVNFIQPLSIPRS--PHRIYFYFSSPIDSRLYTSAMKNRSQVEEMYGNIRDQVENGIRYLLDKRKEDPFEVWWKRIVFESVTGVAAPT 907
BLAST of mRNA_Ecto-sp13_S_contig8298.19647.1 vs. uniprot
Match: A0A813DGN6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DGN6_POLGL) HSP 1 Score: 55.1 bits (131), Expect = 3.190e-6 Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 1
Query: 163 RHYFVFGPAIDTSLVDEKDRGTCQAAYELTKSCVREGISFLLESRKQDPYRDGAKRWLYESV 348
R YF FG +D +D KD+ C Y+ + V IS+LLE+R +DPYRD +R ++E V
Sbjct: 635 RFYFSFGTPVDLKGLDPKDKDGCDKVYKSLQGDVEAEISWLLEARVRDPYRDFVRRQMWERV 696
BLAST of mRNA_Ecto-sp13_S_contig8298.19647.1 vs. uniprot
Match: UPI0018ADFF0D (acyltransferase-like protein At1g54570, chloroplastic n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018ADFF0D) HSP 1 Score: 51.6 bits (122), Expect = 5.030e-5 Identity = 32/80 (40.00%), Postives = 44/80 (55.00%), Query Frame = 1
Query: 151 KVPARHYFVFGPAIDTS--LVDEKDRGTCQAAYELTKSCVREGISFLLESRKQDPYRDGAKRWLYESV--MKTQAPTFPL 378
K P R YF+FG I+T + +DR Y KS V+ IS+LLE R++DPYR+ R LY++ + PTF L
Sbjct: 592 KFPGRVYFLFGKPIETRGREAELRDRKKAYQLYMHAKSEVKNCISYLLEKREKDPYRNLLPRLLYKATHGFTSVVPTFEL 671
BLAST of mRNA_Ecto-sp13_S_contig8298.19647.1 vs. uniprot
Match: A0A2Z7C2A1_9LAMI (Acyltransferase-like protein chloroplastic-like n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7C2A1_9LAMI) HSP 1 Score: 51.6 bits (122), Expect = 5.050e-5 Identity = 32/78 (41.03%), Postives = 43/78 (55.13%), Query Frame = 1
Query: 151 KVPARHYFVFGPAIDTSLVDE--KDRGTCQAAYELTKSCVREGISFLLESRKQDPYRDGAKRWLYESVMKT--QAPTF 372
KVP R Y++FG I T + KD+ + Y KS V IS+LLE RK+DPYR R +Y ++ + QAP F
Sbjct: 616 KVPGRLYYLFGKPIHTKGKKDMLKDKERSRELYLHIKSIVEANISYLLEKRKEDPYRGIFDRTMYRALDASVDQAPAF 693
BLAST of mRNA_Ecto-sp13_S_contig8298.19647.1 vs. uniprot
Match: A0A6I9TBP6_SESIN (acyltransferase-like protein At1g54570, chloroplastic n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9TBP6_SESIN) HSP 1 Score: 50.8 bits (120), Expect = 9.400e-5 Identity = 30/78 (38.46%), Postives = 42/78 (53.85%), Query Frame = 1
Query: 151 KVPARHYFVFGPAIDTSLVDE--KDRGTCQAAYELTKSCVREGISFLLESRKQDPYRDGAKRWLYES--VMKTQAPTF 372
K+P R Y++FG I T +E KDR + Y KS V +S+LL+ RK+DPYR R +Y + Q P+F
Sbjct: 637 KIPGRLYYLFGKPIQTKGREEMLKDREEARKVYLQIKSGVETNMSYLLQKRKEDPYRGILDRTVYRAFHAPMDQVPSF 714 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8298.19647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8298.19647.1 >prot_Ecto-sp13_S_contig8298.19647.1 ID=prot_Ecto-sp13_S_contig8298.19647.1|Name=mRNA_Ecto-sp13_S_contig8298.19647.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=122bp MDLEEIFSLPFGVGEKMKDAADSIPRARQGDDLEYFLPPIARPKVKVPARback to top mRNA from alignment at Ecto-sp13_S_contig8298:406..1477+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8298.19647.1 ID=mRNA_Ecto-sp13_S_contig8298.19647.1|Name=mRNA_Ecto-sp13_S_contig8298.19647.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1072bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8298:406..1477+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8298:406..1477+ >mRNA_Ecto-sp13_S_contig8298.19647.1 ID=mRNA_Ecto-sp13_S_contig8298.19647.1|Name=mRNA_Ecto-sp13_S_contig8298.19647.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=366bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8298:406..1477+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |