mRNA_Ecto-sp13_S_contig8292.19641.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8292.19641.1 vs. uniprot
Match: D7FZL6_ECTSI (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL6_ECTSI) HSP 1 Score: 493 bits (1270), Expect = 4.530e-162 Identity = 379/406 (93.35%), Postives = 383/406 (94.33%), Query Frame = 1
Query: 4 QTYLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEVLESDSMRTQLSTLATQLQKAVNLVKPAEQTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLREKEKIQRIERELELQQTKEMLARLGKKADNVEKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADKLEHDRRWQAHLESHKKASRVSRLKDER---PATAEPVAWEKDMVDKKAVSNMYEDAEVFQSNILESRQAEHAAEVIAAEERARAFQKQKKVERALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXREALEAERQAAXXXXXXXXXXXXXXXDEERASRGLGPEE 1212
QTYLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEV+ESDSMRTQLSTLATQLQKAVNLVKPAEQTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLREKEKIQRIERELELQQTKEML RLGKKADNVEKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADKLEHD+RW+AHLESHKKASRVSRLKD R P W KKAVSNMYEDAEVFQSNILESRQAEHAAEVIAAEERARAFQKQKKV+RALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXREALEAE XXXXXXXXXXXXXXXDEERASRGLGPEE
Sbjct: 464 QTYLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPAEQTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLREKEKIQRIERELELQQTKEMLVRLGKKADNVEKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADKLEHDKRWKAHLESHKKASRVSRLKDRRLQPPNRRGRRTW----WTKKAVSNMYEDAEVFQSNILESRQAEHAAEVIAAEERARAFQKQKKVQRALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXREALEAEXXXXXXXXXXXXXXXXXXXDEERASRGLGPEE 865
BLAST of mRNA_Ecto-sp13_S_contig8292.19641.1 vs. uniprot
Match: A0A6H5KVX7_9PHAE (PCI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX7_9PHAE) HSP 1 Score: 387 bits (993), Expect = 1.700e-125 Identity = 250/337 (74.18%), Postives = 253/337 (75.07%), Query Frame = 1
Query: 4 QTYLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEVLESDSMRTQLSTLATQLQKAVNLVKPAEQTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----KLREKEKIQRIERELELQQTKEMLARLGKKADNVEKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADKLEHDRRWQAHLESHKKASRVSRLKDERPATAEPVAWEKDMVDKKAVSNMYEDAEVFQSNILESRQAEHAAEVIAAEERARAFQKQKKVER 1002
QTYLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKA CLRFGGEV+ESDSMRTQLSTLATQLQKAVNLVKPAEQTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEA XXXXX XX K ELELQQTKEMLARLGKKADNVEKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELP+LRKKYEAQ AWEKDMVDKKA+S MYEDAEVFQSNILESRQAEHAAEVIAAEERARAFQKQKKVER
Sbjct: 254 QTYLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKAGCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPAEQTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEAERREQDXXXXXARRRGGVRQEEDLKRKAXXAARLARXXKXXXXXXXXXXXXELELQQTKEMLARLGKKADNVEKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPMLRKKYEAQ---------------------------------------AWEKDMVDKKAMSYMYEDAEVFQSNILESRQAEHAAEVIAAEERARAFQKQKKVER 551
BLAST of mRNA_Ecto-sp13_S_contig8292.19641.1 vs. uniprot
Match: A0A7S2BB15_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BB15_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.040e-35 Identity = 126/301 (41.86%), Postives = 175/301 (58.14%), Query Frame = 1
Query: 28 LSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEVLESDSMRTQLSTLATQLQKAVNLVKPA-----EQTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLREKEKIQRIERELELQQTKEMLARLGKKADNVEKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADKLEHDRRWQAHLESHKKASRVSRLKDERPATAEPVAWEKDMVDKKAVSNMYEDAEVFQSNIL 915
LS E+EK+IV AVK +QV+V VDH++ CLRFG +LESD+MR QL+TLATQL K +++P E+T + RA FFS V +M REH ALNRKNIIE+RK XXXXX XXXXXXXXXX E+EK +++ E+E ML +GK NV+ L + R+ ++ + K+S +K ++DE + +AKR+DYITRALR EE+P+++++Y+ +AD +E+HK R LK + A WE D+ K VS M F+ I+
Sbjct: 127 LSDNEIEKMIVAAVKDKQVQVRVDHQSGCLRFGEAILESDNMRMQLTTLATQLHKVSEIIEPPNVLNPEKTAE--RAAFFSLVRDNMEREHHLALNRKNIIERRKXXXXXXXXEKLKHEERIRLEAEKXXXXXXXXXXKADAXXXEQEKFAKMKAEMERDNMVSMLKSIGKDVSNVDGLTEKDRDRILDEAKESAIKARDDEAQQALDKAKRIDYITRALRDEEIPMIQQQYQTIQSAD-----------VEAHK--LRCEELKKKHRAD-----WEADIAAKAKVSKMAGHRATFEDEIM 407
BLAST of mRNA_Ecto-sp13_S_contig8292.19641.1 vs. uniprot
Match: A0A836CG33_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG33_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.220e-32 Identity = 139/321 (43.30%), Postives = 191/321 (59.50%), Query Frame = 1
Query: 10 YLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEVLESDSMRTQLSTLATQLQKAVNL----------------VKPAEQTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLREKEKIQRIERELELQQTKEMLARLGKKADNVEKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADKLEHDRRWQAHLESHKKASRVSRLKDERPATAEPVAWEKDMVDKKAVSNMYEDAEVFQSNILESR 924
YL G+ + FQEVEKL+VRA K + ++V VD++ +CLRF V+E++ MR+QL++LA QL V L VK A+ R FF++V S + EH+ AL RK +IEK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L +TK +L LGKK +N+E +DK+ RE I+ KD ++ EKE E+ R+K QAKR+DYI RA+R+EE PVL++K+ AQ AD+ +H RR + + H+ + WE+ + K A++ M F++ +L+ R
Sbjct: 470 YLAGLEMDFQEVEKLVVRAAKSKDIQVAVDYQVQCLRFTPAVMETEGMRSQLTSLARQLNDVVTLIGGFDAKGITDAGAIIVKEADSAAA--RHSFFAKVSSHVETEHAAALRRKEVIEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAETKNVLKELGKKVENLETMDKAAREIAIKTAKDEILTEKEKEEKRMKDQAKRMDYIVRAMRMEEAPVLQQKFAAQQEADQADHARRVEEYRVKHR------------------LEWEESIKQKAALAKMQSYRSAFEAQVLQDR 770
BLAST of mRNA_Ecto-sp13_S_contig8292.19641.1 vs. uniprot
Match: A0A7S0GDB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GDB7_9STRA) HSP 1 Score: 133 bits (335), Expect = 6.660e-31 Identity = 125/334 (37.43%), Postives = 190/334 (56.89%), Query Frame = 1
Query: 19 GVRLSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEVLESDSMRTQLSTLATQLQKAVNLVKPAEQTTQ-QQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLREKEKIQRIERELELQQTKEMLARLGKKADNVE--KLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADKLEHDRRWQAHLESHKKASRVSRLKDERPATAEPVAWEKDMVDKKAVS--NMYEDAEVFQSNILESRQAEHAAEVIAAEERARAFQKQKKVERA 1005
G+ ++F+EVE IV A + + VT+DH+A CLRFG E LES+SMR L L +L N++ P + + ++R F+ V ++ +EH L RKN IEKRKEE XXXXXXXXXXXXXXXXXX LR+K+K Q I++EL+L + ++L LG+ A+N+ +L + E L ++ D V K+KE + +LK AKRLDYITRA+RIEELP+++ ++E + AD+ +++ + LE+ + W D+ K+ + +++ VF+ I+E R A H A+ A +++K+ERA
Sbjct: 166 GLGMAFEEVETGIVVATRAKLFSVTIDHQANCLRFGDEALESESMRDHLRILGRRLASVSNIIHPPDTNAKLERRVTLFNSVRQNLAKEHLAVLERKNEIEKRKEEVERLAQITLKKEIELKAXXXXXXXXXXXXXXXXXXXLRDKQKEQMIQQELDLMKKSKILEDLGRSAENMNAAELAEIDTEALAKQHADKVTKKKEAAERKLKEIAKRLDYITRAIRIEELPLIQTRFEERNRADRERYEKETEERLETMRGQ------------------WGSDVEKKQGLEKHDVFAHTSVFEDLIMEGRVAVHEEACAVADTLAEQVAEKEKIERA 481
BLAST of mRNA_Ecto-sp13_S_contig8292.19641.1 vs. uniprot
Match: A0A8J9S3E1_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S3E1_PHATR) HSP 1 Score: 131 bits (330), Expect = 1.360e-29 Identity = 137/335 (40.90%), Postives = 201/335 (60.00%), Query Frame = 1
Query: 16 TGVRLSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEVLESDSMRTQLSTLATQLQKAVNLVKPAE-QTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLREKEKIQRIERELELQQTKEMLARLGKKADNV--EKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADKLEHDRRWQAHLESHKKASRVSRLKDERPATAEPVAWEKDMVDKKAVS--NMYEDAEVFQSNILESRQAEHAAEVIAAEERARAFQKQKKVERA 1005
+G+ LSF++VEK IV + K V++ DH+A CLRFG LESD+MR+QL L+ QLQ N++ P + Q+ Q R + V ++ EH+ L RKN+IE RKEE XXXXXXXXXXXXXXXXXXXXXXXXXXXX +I++EL+ Q+ K LA +GKK +++ E++ K E L R+ + + KE+E+ + + + AK+LDY+ RA+RIEELP+++KKYE + DK ++ Q ++E +KA + WE D+ DK + N++ F+++++ RQAEH AEE A ++ K+ RA
Sbjct: 276 SGLDLSFEQVEKTIVTSSKTLAVRL--DHRAGCLRFGNVQLESDAMRSQLVNLSKQLQAVSNVLTPPDRQSVLQSRLSTYQSVRENLHAEHAAVLERKNLIETRKEETERVAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIQQELDNQEKKRFLAAMGKKTEDISEEQIAKIDTEALQREHEAKINKEREEAERKTRETAKKLDYLVRAIRIEELPLIKKKYEEKTKLDKERYE---QENIEKAQKAK---------------LQWEADVKDKAVLESHNVFAYCSEFENSVMVGRQAEHDVICQRAEEEAEMEAEKAKISRA 590
BLAST of mRNA_Ecto-sp13_S_contig8292.19641.1 vs. uniprot
Match: B7G0T8_PHATC (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G0T8_PHATC) HSP 1 Score: 131 bits (330), Expect = 1.610e-29 Identity = 137/335 (40.90%), Postives = 201/335 (60.00%), Query Frame = 1
Query: 16 TGVRLSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEVLESDSMRTQLSTLATQLQKAVNLVKPAE-QTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLREKEKIQRIERELELQQTKEMLARLGKKADNV--EKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADKLEHDRRWQAHLESHKKASRVSRLKDERPATAEPVAWEKDMVDKKAVS--NMYEDAEVFQSNILESRQAEHAAEVIAAEERARAFQKQKKVERA 1005
+G+ LSF++VEK IV + K V++ DH+A CLRFG LESD+MR+QL L+ QLQ N++ P + Q+ Q R + V ++ EH+ L RKN+IE RKEE XXXXXXXXXXXXXXXXXXXXXXXXXXXX +I++EL+ Q+ K LA +GKK +++ E++ K E L R+ + + KE+E+ + + + AK+LDY+ RA+RIEELP+++KKYE + DK ++ Q ++E +KA + WE D+ DK + N++ F+++++ RQAEH AEE A ++ K+ RA
Sbjct: 511 SGLDLSFEQVEKTIVTSSKTLAVRL--DHRAGCLRFGNVQLESDAMRSQLVNLSKQLQAVSNVLTPPDRQSVLQSRLSTYQSVRENLHAEHAAVLERKNLIETRKEETERVAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIQQELDNQEKKRFLAAMGKKTEDISEEQIAKIDTEALQREHEAKINKEREEAERKTRETAKKLDYLVRAIRIEELPLIKKKYEEKTKLDKERYE---QENIEKAQKAK---------------LQWEADVKDKAVLESHNVFAYCSEFENSVMVGRQAEHDVICQRAEEEAEMEAEKAKISRA 825
BLAST of mRNA_Ecto-sp13_S_contig8292.19641.1 vs. uniprot
Match: A0A7S4K9L6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K9L6_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.070e-22 Identity = 108/276 (39.13%), Postives = 161/276 (58.33%), Query Frame = 1
Query: 1 VQTYLTGVRLSFQEVEKLIVRAVKQRQ-------VKVTVDHKARCLRFG----GE----------------VLESDSMRTQLSTLATQLQKAVNLVKPAEQTTQQ-QRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLREKEKIQRIERELELQQTKEMLARLGKKADNV----EKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADK 732
V++ G+ + F VE+ IV + ++V +DH+A CLRFG GE LESD+MR QL L+T L K ++V PA+ T + ++A F V S + EH L RK +IE+RKEEA XXXXXXXXXXXXXXXXXX ++RE+EK+Q+I++EL++Q+ K +L +GK+ ++ E+L+ ++L R+ K+KE+ + ++K +KRLDYI RA RIEELP++RK+YE +V ++
Sbjct: 555 VKSLTEGLGVPFVRVERAIVGCARDDDLSRSSATIRVRIDHRANCLRFGEYSAGEEGDDGQDGSGSGSRVGALESDAMRKQLLLLSTGLAKVSSIVDPADDTQYKAEKAQLFMVVRSKLSSEHEAMLARKELIERRKEEAERLAQEKIKEAARIKXXXXXXXXXXXXXXXXXXQRVREREKLQKIQKELDIQEKKRLLKAMGKEKESEVMTEEQLELVDTQKLAREHAAKANKKKEEAERKVKELSKRLDYIVRATRIEELPLVRKRYEEKVKRER 830
BLAST of mRNA_Ecto-sp13_S_contig8292.19641.1 vs. uniprot
Match: B8C1C2_THAPS (Eukaryotic translation initiation factor 3, subunit 10 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1C2_THAPS) HSP 1 Score: 108 bits (271), Expect = 6.360e-22 Identity = 121/325 (37.23%), Postives = 183/325 (56.31%), Query Frame = 1
Query: 1 VQTYLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEVLESDSMRTQLSTLATQLQKAVNLVKPAEQT-TQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLREKEKIQRIER--------ELELQQTKEMLARLGKKADN--VEKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADKLEHDRRWQAHLESHKKASRVSRLKDERPATAEPVAWEKDMVDKKAVS--NMYEDAEVFQSNILESRQAEH 936
V+ TG+ +SF+++EK IV + + R + V +DH+A C+RFG LES+ MR QLSTLA +L A N++ P + +RA ++ V S + EH L RK +IEKRKEEA XXXXXXXXXXXXXXXXXXXXXXXXXXX KIQ+I+ E++ + K L +G+ +N V++L + L ++ + K+K A++LDY+ RA+RIEELP ++ +YE ++ DK ++ H+ + R KD+ WE D+ +K A+ ++++ F+S I+ +R+ H
Sbjct: 475 VKNLTTGLGVSFEQIEKSIVLSTQSRVLSVRIDHRAGCIRFGNAALESNEMRGQLSTLAKRLTTACNIISPPDVAPVVSERAALYAHVRSTLESEHIATLERKIVIEKRKEEAERIVQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIQKIQDGECDLDGGEMDAMEKKRYLTAMGRNVENMTVDQLKEVDTAALAKEHAEKANKKKXXXXXXXXXXARQLDYLVRAVRIEELPQIKSEYEKKIKEDKENYE---------HEVIEKAKRAKDQ---------WETDVKEKAALQECSVFDYTSEFESMIMSARKIVH 781
BLAST of mRNA_Ecto-sp13_S_contig8292.19641.1 vs. uniprot
Match: A0A1Z5KQK7_FISSO (Eukaryotic translation initiation factor 3 subunit A n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQK7_FISSO) HSP 1 Score: 108 bits (271), Expect = 6.550e-22 Identity = 101/328 (30.79%), Postives = 177/328 (53.96%), Query Frame = 1
Query: 4 QTYLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEVLESDSMRTQLSTLATQLQKAVNLVKPAEQTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLREKEKIQRIERELELQQTKEMLARLGKKADNV--EKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADKLEHDRRWQAHLESHKKASRVSRLKDERPATAEPVAWEKDMVDKKAVS--NMYEDAEVFQSNILESRQAEHAAEVIAAEERARA 975
Q TG ++F ++EK +V+ + + + V +DH+A CLRFG + S T L Q+ K+++ P ++ ++ QR + + +H+ L RK +IEKRKE+A XXXXXXXX +LRE EK ++I++EL+ Q+ K L +GK + + E++ + E L R+ ++ + K+KE+ + + K AK+LDY+ RA+RIEELP++RKKYE +K+ HDR + + +++ ++++ + WE+D+ KKA+ +++ + F+ ++ R+AEH+ AE A A
Sbjct: 525 QRLTTG--MTFHQIEKSLVQFTQTKAITVRIDHRAGCLRFGATTDWNSSQLTVLGKSLEQVAKSIHPPAPTDRLSEYQR------IRESLDDDHTGLLKRKELIEKRKEQAERDVQEKLRLAAQRKAEEDXXXXXXXXKRIAREQRLRELEKXRKIQQELDNQEKKRFLTAMGKDTEAMTDEQISQIDTEALQREHQEKLNKKKEEAERKTKEVAKKLDYLVRAIRIEELPLIRKKYE-----EKVNHDR--DLYEKENEEKVKIAKKR-----------WEEDVEAKKALEAHSVFSYCQKFEDMVMTWREAEHSVLCAEAERNAEA 826 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8292.19641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8292.19641.1 >prot_Ecto-sp13_S_contig8292.19641.1 ID=prot_Ecto-sp13_S_contig8292.19641.1|Name=mRNA_Ecto-sp13_S_contig8292.19641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=404bp VQTYLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEVLESDSback to top mRNA from alignment at Ecto-sp13_S_contig8292:259..6955+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8292.19641.1 ID=mRNA_Ecto-sp13_S_contig8292.19641.1|Name=mRNA_Ecto-sp13_S_contig8292.19641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6697bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8292:259..6955+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8292:259..6955+ >mRNA_Ecto-sp13_S_contig8292.19641.1 ID=mRNA_Ecto-sp13_S_contig8292.19641.1|Name=mRNA_Ecto-sp13_S_contig8292.19641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1212bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8292:259..6955+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |