prot_Ecto-sp13_S_contig82.19551.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig82.19551.1
Unique Nameprot_Ecto-sp13_S_contig82.19551.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length217
Homology
BLAST of mRNA_Ecto-sp13_S_contig82.19551.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 8.910e-142
Identity = 201/216 (93.06%), Postives = 211/216 (97.69%), Query Frame = 0
Query:    1 GFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCEIHDNQVDGGEFGIRVHLGSSNNKIYDNVFKNIWNVGMFTYYGSDEPWVGGGRPYDNEFYDNAIEATETGVKIKDSDNISITNNAFSGTTEIEFNDAIDTVWSGNSIPTNTCLENIDDSSTFTGSSGLPLAC 216
            GFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGC+IHDNQVDGGEFGIRVHLGSSNNK++DNVFKNIWNVGMFTY GSDEPWVGGGRP DNEFY+N I+ATETGVKIK+SDNISITNNAFSGTTEIEFN+AID VWSGNSIPTNTCLE+ID++STFTGSSGLPL C
Sbjct:  232 GFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGGGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNNSTFTGSSGLPLEC 447          
BLAST of mRNA_Ecto-sp13_S_contig82.19551.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 2.350e-75
Identity = 128/216 (59.26%), Postives = 158/216 (73.15%), Query Frame = 0
Query:    5 HDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCEIHDNQVDGGEFGIRVHLGSSNNKIYDNVFKNIWNVGMFTYYGSDEPWVGGGRPYDNEFYDNAIEATETGVKIKDSDNISITNNAFSGTTEIEFNDAIDTVWSGNSIPTNTCLENI--DDS-----STFTGSSGLP 213
            HD+  Y  +A NKVYNN NHGIIASKRCNNVKIYDN+V DGG DA GIFLHRS D++EVYGN I NM DAGIA+LE+   +IHDN++DG +FGIR+ LGS  N +YDN F +  + G++TY GSDEP V  GRP  N F +N +  +  GVK K+SDNI +TNN F+GT E+EF DA  T WSGNS+P+  C++NI  DD      STF+ SSG+P
Sbjct:  248 HDNHQY--VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDDGNSVPPSTFSSSSGVP 461          
BLAST of mRNA_Ecto-sp13_S_contig82.19551.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 3.480e-64
Identity = 118/214 (55.14%), Postives = 148/214 (69.16%), Query Frame = 0
Query:    1 GFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCEIHDNQVDGGEFGIRVHLGSSNNKIYDNVFKNIWNVGMFTYYGSDEPWVGGGRPYDNEFYDNAIEATETGVKIKDSDNISITNNAFSGTTEIEFNDAIDTVWSGNSIPTNTCLENIDDSSTFTGSSGLPL 214
            GFDPHDDSDYL IA N+VYNNVNHGIIASKRCNNVKI++NEV DGGA AAGIFLHRS D + V+ NTITNM DAGIAMLE+   +I+ N ++G ++GIR+ LGS NN++Y N F +I   G++TY GSDEP V  GRP  N    N +E    GVKIK+ D+     N F      EF ++ +T+WSGN I    C+E  D+    +GS  +P+
Sbjct:  672 GFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVSDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG-CIEEDDEFDAASGSDSIPI 884          
BLAST of mRNA_Ecto-sp13_S_contig82.19551.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 4.860e-56
Identity = 115/227 (50.66%), Postives = 152/227 (66.96%), Query Frame = 0
Query:    1 GFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCEIHDNQVDGGEFGIRVHLGSSNNKIYDNVFKNIWNVGMFTYYGSDEPW--VGGGRPYDNEFYDNAIEATETGVKIKDSDNISITNNAFSGTTEIEFNDAIDTVWSGNSIPTNTCLENI--DDS-----STFTG-SSGLP-LAC 216
            GFDPHDDSDYL              IIASKRCNNV+IY+NEVYDGG  AAGIFLHRS D + V+ N + +M DAG+AMLE+   +I++N+    +FGIR+ LGSS N +++N+F+++   G++TY GSDEP   V  GRP DN F +N I     GVKIK+ D+  IT+N F+GT+E+EF DA +T W GN++P   C++NI  DD      STF   ++GLP L C
Sbjct:  309 GFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIKNIHSDDGIDIELSTFDRRTAGLPTLEC 523          
BLAST of mRNA_Ecto-sp13_S_contig82.19551.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 4.790e-53
Identity = 104/193 (53.89%), Postives = 127/193 (65.80%), Query Frame = 0
Query:    1 GFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCEIHDNQVDGGEFGIRVHLGSSNNKIYDNVFKNIWNVGMFTYYGSDEPWV--GGGRPYDNEFYDNAIEAT--ETGVKIKDSDNISITNNAFSGTTEIEFNDAIDTVWSGN 189
            GFDPHDDSD L I+ N VY N NHGIIASKRCNNVKI++NEVYDGG DA GIFLHRS D +EV+ N + NM DAG+AM+E+    I+DN      +GIR+ LGS  N I +N+F  I   G++TY GSD+P V    GRP DN F  N IE      GV IK+ D+    +N F+G +  EF D+ DT W  N
Sbjct:  420 GFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDN 612          
BLAST of mRNA_Ecto-sp13_S_contig82.19551.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 1.880e-50
Identity = 105/222 (47.30%), Postives = 137/222 (61.71%), Query Frame = 0
Query:    1 GFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCEIHDNQVDGGEFGIRVHLGSSNNKIYDNVFKNIWNVGMFTYYGSDEPWVG---GGRPYDNEFYDNAIEATETGVKIKDSDNISITNNAF---SGTTEIEFNDAIDTVWSGNSIPTNTCLENIDDSSTFTGSSGLPLAC 216
            GFDPHDDSD L IA N V+ N NHGIIASKRCNNVKI+ N VYDGG  A GIFLHRS DD EV+ NT+ +M DAG+A++E+ G  I+DN     ++GIR+ +G+S N + +N F      G++TY G+DEP       G   DN F+ N +E    GVKI+ ++ I+ T+N F   S   E  F D  D VW+ N +P   CL+  D++  F     LP  C
Sbjct:  688 GFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNLVPDGICLKGDDNTDYFKSYDSLPDTC 906          
BLAST of mRNA_Ecto-sp13_S_contig82.19551.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 1.680e-48
Identity = 103/222 (46.40%), Postives = 135/222 (60.81%), Query Frame = 0
Query:    1 GFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCEIHDNQVDGGEFGIRVHLGSSNNKIYDNVFKNIWNVGMFTYYGSDEPWVG---GGRPYDNEFYDNAIEATETGVKIKDSDNISITNNAF---SGTTEIEFNDAIDTVWSGNSIPTNTCLENIDDSSTFTGSSGLPLAC 216
            GFDPHDDSD L IA N V+ N NHGIIASKRCNNVKI+ N VYDGG  A GIFLHRS DD EV+GNT+ +M DAG+A++E+ G  IHDN     ++GIR+ +G++ N + +N F      G++TY G+D+P       G   DN F+ N +E    GVKI+ ++ I  T+N F   S   E  F D  D VW+ N +P + CL+   +         LP  C
Sbjct:  627 GFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNIDYMKSYDSLPDLC 845          
BLAST of mRNA_Ecto-sp13_S_contig82.19551.1 vs. uniprot
Match: Q7XAK0_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK0_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 3.580e-43
Identity = 88/199 (44.22%), Postives = 120/199 (60.30%), Query Frame = 0
Query:    1 GFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCEIHDNQVDGGEFGIRVHLGSSNNKIYDNVFKNIWNVGMFTYYGSDEP-WVGGGRPYDNEFYDNAIEATETGVKIKDSDNISITNNAFSGTTEIEFNDAIDTVWSGNSIPTNTCLE 198
            GFDPHDDSD+L +  N+VY+N  HGIIASKRCN V I  NEVY G + +AGIFL+RS DD+ V GN + + GDAG+AM+E+   ++ DN  +  ++G+R+ +G   N    NV         ++Y G+D P  V  GR  DN F +N I      +KI D+D      N+F     I F+DA  TV SGN+  T+T L+
Sbjct:   49 GFDPHDDSDFLTVHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGASSSAGIFLYRSSDDAVVKGNYVHDNGDAGLAMMESFNADVSDNIFENNKYGVRISVGCGRNIFSKNVISGSTKYNAYSYLGTDAPDVVKSGRSKDNCFQENTIVGGIETLKIMDADGTEFIGNSFEDAVTIRFDDAARTVMSGNTGLTDTKLK 247          
BLAST of mRNA_Ecto-sp13_S_contig82.19551.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.100e-42
Identity = 88/194 (45.36%), Postives = 122/194 (62.89%), Query Frame = 0
Query:    1 GFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCEIHDNQVDGGEFGIRVHLGSSNNKIYDNVFKNIWNVGMFTYYGSDEP-WVGGGRPYDNEFYDNAIEATETGVKIKDSDNISITNNAFS-GTTE---IEFNDAIDTVWSGN 189
            GFDPHDDSD+L I  N+VYNN  HGIIASKRCN V I  NEVY G   +AGIFLHRS DD+ V GN + + GDAG+AMLE+   ++ +N  +  ++G+R+ +G ++N   +N+  N      +TY GSDEP  V  GR  +N F  N+    E  +KIK++D     +N F  G  +   + F+DA+++V  GN
Sbjct:  289 GFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGN 482          
BLAST of mRNA_Ecto-sp13_S_contig82.19551.1 vs. uniprot
Match: A0A6H5K1D5_9PHAE (MEP4b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D5_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.140e-41
Identity = 89/190 (46.84%), Postives = 115/190 (60.53%), Query Frame = 0
Query:    1 GFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCEIHDNQVDGGEFGIRVHLGSSNNKIYDNVFKNIWNVGMFTYYGSDEPWVGG-GRPYDNEFYDNAIEATETGVKIKDSDNISITNNAFSGTTEIEFNDAIDTVWSGN 189
            G+DPHDDSD+L I  N VY+N  HGIIASKRCNNV I  N VY G   +AGIFLHRS D + V  N     GDAG+AMLE+S  EI  N  +G ++GIR+ +G  +N +Y+N   N     ++TY GSD   V   GR  DN F  N +      +K+K+SD   ITNN F     +EF++  + V +GN
Sbjct:   74 GYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVYNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGVVEFSNTTENVVTGN 263          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig82.19551.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR8_ECTSI8.910e-14293.06Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JGU8_9PHAE2.350e-7559.26MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LC73_ECTSI3.480e-6455.14Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D8LRM4_ECTSI4.860e-5650.66Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D7G8D9_ECTSI4.790e-5353.89Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LDB5_ECTSI1.880e-5047.30Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF5_9PHAE1.680e-4846.40MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
Q7XAK0_9PHAE3.580e-4344.22Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FXE4_ECTSI1.100e-4245.36Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5K1D5_9PHAE1.140e-4146.84MEP4b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 138..159
e-value: 3800.0
score: 3.1
coord: 8..30
e-value: 54.0
score: 12.7
coord: 104..126
e-value: 700.0
score: 8.3
coord: 81..102
e-value: 730.0
score: 8.2
coord: 160..189
e-value: 3300.0
score: 3.5
coord: 58..80
e-value: 60.0
score: 12.5
coord: 32..56
e-value: 7.8
score: 15.4
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..134
e-value: 1.4E-31
score: 111.7
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 8..129
e-value: 1.3E-14
score: 54.4
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 51..92
e-value: 1.2E-5
score: 22.9
coord: 75..116
e-value: 6.1E-5
score: 20.6
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 8..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig82contigEcto-sp13_S_contig82:311..3057 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig82.19551.1mRNA_Ecto-sp13_S_contig82.19551.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig82 311..3057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig82.19551.1 ID=prot_Ecto-sp13_S_contig82.19551.1|Name=mRNA_Ecto-sp13_S_contig82.19551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=217bp
GFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAA
GIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCEIHDNQVDGGEFGIRV
HLGSSNNKIYDNVFKNIWNVGMFTYYGSDEPWVGGGRPYDNEFYDNAIEA
TETGVKIKDSDNISITNNAFSGTTEIEFNDAIDTVWSGNSIPTNTCLENI
DDSSTFTGSSGLPLAC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR022441Para_beta_helix_rpt-2
IPR011050Pectin_lyase_fold/virulence