mRNA_Ecto-sp13_S_contig81862.19537.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig81862.19537.1 vs. uniprot
Match: A0A6H5KC33_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC33_9PHAE) HSP 1 Score: 122 bits (305), Expect = 6.490e-31 Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 1
Query: 1 SFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQAEHAKPEDLQEV 192
SFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQ++ A P+DLQEV
Sbjct: 154 SFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQSKEADPKDLQEV 217
BLAST of mRNA_Ecto-sp13_S_contig81862.19537.1 vs. uniprot
Match: D7G5Z7_ECTSI (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Z7_ECTSI) HSP 1 Score: 112 bits (281), Expect = 1.390e-27 Identity = 51/64 (79.69%), Postives = 59/64 (92.19%), Query Frame = 1
Query: 1 SFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQAEHAKPEDLQEV 192
S+F+TG+PDA C+VVTSQDALLHAGSERHRA+GEAAR+LKPGGRMVF D+MQ HA P+DLQEV
Sbjct: 468 SYFDTGLPDACCEVVTSQDALLHAGSERHRAVGEAARLLKPGGRMVFNDVMQTNHADPKDLQEV 531
BLAST of mRNA_Ecto-sp13_S_contig81862.19537.1 vs. uniprot
Match: A0A6H5L6E6_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E6_9PHAE) HSP 1 Score: 110 bits (274), Expect = 3.030e-27 Identity = 50/64 (78.12%), Postives = 59/64 (92.19%), Query Frame = 1
Query: 1 SFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQAEHAKPEDLQEV 192
S+F+TG+PDA C+VVTSQDALLHAGSERHRA+GEAAR+LKPGGRMVF D+MQ +A P+DLQEV
Sbjct: 268 SYFDTGLPDACCEVVTSQDALLHAGSERHRAVGEAARLLKPGGRMVFNDVMQTNNADPKDLQEV 331
BLAST of mRNA_Ecto-sp13_S_contig81862.19537.1 vs. uniprot
Match: A0A6H5L7A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A2_9PHAE) HSP 1 Score: 110 bits (274), Expect = 1.060e-26 Identity = 49/64 (76.56%), Postives = 59/64 (92.19%), Query Frame = 1
Query: 1 SFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQAEHAKPEDLQEV 192
S+F+TG+PDA C+VVTSQDALLHAGSERHRA+GEAAR+LKPGGRMVF D+MQ HA P+DL++V
Sbjct: 325 SYFDTGLPDACCEVVTSQDALLHAGSERHRAVGEAARLLKPGGRMVFNDVMQTNHADPKDLKDV 388
BLAST of mRNA_Ecto-sp13_S_contig81862.19537.1 vs. uniprot
Match: D7G7W9_ECTSI (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W9_ECTSI) HSP 1 Score: 106 bits (264), Expect = 1.310e-25 Identity = 49/64 (76.56%), Postives = 57/64 (89.06%), Query Frame = 1
Query: 1 SFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQAEHAKPEDLQEV 192
SFFETG+PDASCDVV SQDALLH+G ERHR++ EAARVLKPGGRMVF+DIMQ + P+DLQ+V
Sbjct: 127 SFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVFSDIMQFKETDPKDLQDV 190
BLAST of mRNA_Ecto-sp13_S_contig81862.19537.1 vs. uniprot
Match: A0A835YZA4_9STRA (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA4_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.350e-17 Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 1
Query: 1 SFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQAEHAKPEDLQEV 192
SFFETG P + D V SQD+LLHAGSER RA+ EAARVLKPGG +VFTDIMQ+ A +L V
Sbjct: 138 SFFETGEPAGAYDAVVSQDSLLHAGSERCRAIEEAARVLKPGGCLVFTDIMQSNDANTAELDAV 201
BLAST of mRNA_Ecto-sp13_S_contig81862.19537.1 vs. uniprot
Match: D8LE22_ECTSI (Probable glycine-sarcosine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE22_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 7.040e-16 Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 1
Query: 1 SFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQAEHAKPEDLQEV 192
S+F+T MP AS D V SQDA HA +E HRA+ EAARVLKPGG M F+D MQ++ A P L EV
Sbjct: 113 SYFDTEMPAASMDAVLSQDAFGHASTEHHRAIKEAARVLKPGGVMAFSDFMQSDDADPTKLGEV 176
BLAST of mRNA_Ecto-sp13_S_contig81862.19537.1 vs. uniprot
Match: A0A6T8NTF3_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8NTF3_HEMAN) HSP 1 Score: 76.3 bits (186), Expect = 5.870e-15 Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 1 SFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQAEHAKPEDL 183
SFF+T S D+V SQD+LLHAGSERH+ + EA+R+LK GG VFTDIMQ++ PE L
Sbjct: 159 SFFDTEAESTSMDLVVSQDSLLHAGSERHKVIEEASRILKKGGYFVFTDIMQSDSCDPEVL 219
BLAST of mRNA_Ecto-sp13_S_contig81862.19537.1 vs. uniprot
Match: A0A5J4YL55_PORPP (Dimethylglycine N-methyltransferase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL55_PORPP) HSP 1 Score: 75.5 bits (184), Expect = 2.030e-14 Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 1
Query: 1 SFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQAEHAKPEDLQEV 192
SF TG+ DAS DVV S D++LHAG ER + + EAAR+LKP GR+VF+D MQ E A E L+ V
Sbjct: 394 SFTHTGLADASVDVVVSHDSILHAGPEREQVIAEAARILKPHGRLVFSDPMQCEDADSEALRAV 457
BLAST of mRNA_Ecto-sp13_S_contig81862.19537.1 vs. uniprot
Match: A0A3E1KCJ9_9GAMM (Methyltransferase domain-containing protein n=1 Tax=Wenzhouxiangella sediminis TaxID=1792836 RepID=A0A3E1KCJ9_9GAMM) HSP 1 Score: 69.7 bits (169), Expect = 1.170e-12 Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 13 TGMP--DASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQAEHAKPEDLQEV 192
T +P D S DVV SQDA+LH+G +R R EAARVLKPGGR++FTD MQ++ A PE LQ +
Sbjct: 127 TNLPYEDGSFDVVWSQDAILHSG-DRARVCAEAARVLKPGGRLIFTDPMQSDDADPERLQPI 187 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig81862.19537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig81862.19537.1 >prot_Ecto-sp13_S_contig81862.19537.1 ID=prot_Ecto-sp13_S_contig81862.19537.1|Name=mRNA_Ecto-sp13_S_contig81862.19537.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=58bp MPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQAEHAback to top mRNA from alignment at Ecto-sp13_S_contig81862:13..204- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig81862.19537.1 ID=mRNA_Ecto-sp13_S_contig81862.19537.1|Name=mRNA_Ecto-sp13_S_contig81862.19537.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=192bp|location=Sequence derived from alignment at Ecto-sp13_S_contig81862:13..204- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig81862:13..204- >mRNA_Ecto-sp13_S_contig81862.19537.1 ID=mRNA_Ecto-sp13_S_contig81862.19537.1|Name=mRNA_Ecto-sp13_S_contig81862.19537.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=174bp|location=Sequence derived from alignment at Ecto-sp13_S_contig81862:13..204- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |