mRNA_Ecto-sp13_S_contig8123.19467.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: D8LCR6_ECTSI (Threonine ammonia-lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCR6_ECTSI) HSP 1 Score: 420 bits (1080), Expect = 5.570e-144 Identity = 223/238 (93.70%), Postives = 226/238 (94.96%), Query Frame = 1
Query: 1 MAMRSAVRGVVGRPLVAPQSSARPVLSWAAARWKGSAATPKSESAXXXXXXKEDTKTKATEPDKSESATPPELPVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 714
M MRSAVRGVVGRPLVAPQSSARPVLSWAAARWKGSAATPKSE+A XXX KED K KA EPDK + TPP+LPVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGME VYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL
Sbjct: 1 MPMRSAVRGVVGRPLVAPQSSARPVLSWAAARWKGSAATPKSEAAAAXXXKKEDAKPKAAEPDKPQP-TPPDLPVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGME--VYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 235
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A835YZY4_9STRA (Tryptophan synthase beta subunit-like PLP-dependent enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY4_9STRA) HSP 1 Score: 258 bits (660), Expect = 4.340e-81 Identity = 126/168 (75.00%), Postives = 145/168 (86.31%), Query Frame = 1
Query: 211 PELPVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 714
P PV+F DVS AM+RIRDGIVR+ RSHFLS+LC +A +YLKQEF+QFTGSFKERGARNALM L EE++RGVIAASAGNHALALAWHG Q+GIPVTV MP +AP+TKV+KCK FG NVVQ G HI+EAKDHA SAP+F+GM+YINGYD +I+AGAGTMGMEIL
Sbjct: 35 PVQPVTFEDVSTAMYRIRDGIVRTPCLRSHFLSELC--QADIYLKQEFTQFTGSFKERGARNALMKLTAEEKRRGVIAASAGNHALALAWHGRQMGIPVTVCMPVLAPMTKVSKCKVFGANVVQHGMHIIEAKDHAQSAPEFEGMKYINGYDHPDIIAGAGTMGMEIL 200
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A4D9CYR3_9STRA (PALP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYR3_9STRA) HSP 1 Score: 234 bits (597), Expect = 2.690e-72 Identity = 113/165 (68.48%), Postives = 139/165 (84.24%), Query Frame = 1
Query: 220 PVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 714
PV+F DVS AM RIR+GI+R+ +SHFLSD+C ++Y+K EFSQFTGSFKERGARNAL+ L EEE+KRGV+AASAGNHALAL+WHG QLGIPV+V MP +APL KV+KC+ FG NV+ GQHI EAKD A S P+++G++YINGYDD EIVAGAGT+G+E+L
Sbjct: 97 PVTFEDVSTAMFRIRNGILRTPCYKSHFLSDICN--TNLYVKTEFSQFTGSFKERGARNALLLLTEEEKKRGVMAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVL 259
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A7S3XW64_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW64_HETAK) HSP 1 Score: 224 bits (572), Expect = 1.090e-67 Identity = 111/166 (66.87%), Postives = 136/166 (81.93%), Query Frame = 1
Query: 217 LPVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 714
+PV+F DVSKAM+ IR GIVR+ KRSH+LS++CGM+ +++K EF+QFTGSFKERGARNAL+ L++EER +GV+AASAGNHALALA HG LGIPVT MPTIAPLTKV KC G N+V G HI EAK A + P ++G++YINGYDD EI+AGAGTMG+EIL
Sbjct: 52 MPVTFEDVSKAMYLIRSGIVRTTTKRSHYLSEMCGMD--LFIKNEFTQFTGSFKERGARNALLSLNDEERAKGVMAASAGNHALALARHGGLLGIPVTCFMPTIAPLTKVQKCGKLGANIVIHGAHIGEAKIEAETNPAYEGLKYINGYDDPEIIAGAGTMGIEIL 215
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A7S0NX73_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NX73_9EUKA) HSP 1 Score: 215 bits (547), Expect = 5.650e-67 Identity = 108/164 (65.85%), Postives = 128/164 (78.05%), Query Frame = 1
Query: 223 VSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 714
V F DV +A HRIR GIVR+ ++SH+LS G ++YLK E QFTGSFKERG RNAL+ L E +R GVIAASAGNHALAL+WHG QLG+PVTV MPT AP+ KV KC+AFG +VV G HILEAK HA + +F+G+RYINGYDD EI+AGAGTMGME+L
Sbjct: 26 VRFEDVVRASHRIRSGIVRTPCEKSHWLSQTTG--CNLYLKMEQQQFTGSFKERGGRNALLSLPESKRSAGVIAASAGNHALALSWHGPQLGVPVTVCMPTTAPMAKVEKCRAFGADVVLHGAHILEAKAHAERS-EFEGLRYINGYDDPEIIAGAGTMGMELL 186
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: R1FA18_EMIHU (Threonine ammonia-lyase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FA18_EMIHU) HSP 1 Score: 219 bits (559), Expect = 7.940e-66 Identity = 105/164 (64.02%), Postives = 133/164 (81.10%), Query Frame = 1
Query: 223 VSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 714
V F DV +A HRIR GIVR++ + S+ LS++ G S++LK+E SQ TGSFKERGARNA+M L EE+R+RGVIAASAGNHALALAWHG+QLG+PVTVVMPT+AP+TKV C+ FG N++ G HI EAKD+A P +G+ YINGYDDVE++AG GT+G+E+L
Sbjct: 32 VRFEDVVRAHHRIRSGIVRTECRPSYHLSNMTG--CSIHLKKEQSQVTGSFKERGARNAIMSLSEEQRRRGVIAASAGNHALALAWHGSQLGVPVTVVMPTVAPMTKVQNCRLFGANIIIHGGHIGEAKDYALQDPALQGLTYINGYDDVEVIAGTGTLGIEML 193
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A7S4AXS5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4AXS5_CHRCT) HSP 1 Score: 217 bits (553), Expect = 5.510e-65 Identity = 109/164 (66.46%), Postives = 129/164 (78.66%), Query Frame = 1
Query: 223 VSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 714
V F DV +A HRIR G+VR+ + SH+LS G + +YLK E QFTGSFKERGARNAL+ L +ER RGVIAASAGNHALAL+WHG QL IPVTV MP AP+ KV+KC+AFG NVV GQHILEA++H T P++ GMRYING+DD EIVAGAGT+GME+L
Sbjct: 42 VKFEDVVRASHRIRGGVVRTQCELSHWLSKTTGCQ--LYLKHEQQQFTGSFKERGARNALLSLPHDERHRGVIAASAGNHALALSWHGPQLDIPVTVCMPVTAPMAKVDKCRAFGANVVLHGQHILEAREH-TQRPEYDGMRYINGFDDPEIVAGAGTLGMEML 202
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A7S2UYL9_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYL9_9STRA) HSP 1 Score: 216 bits (551), Expect = 1.430e-64 Identity = 108/175 (61.71%), Postives = 139/175 (79.43%), Query Frame = 1
Query: 190 KSESATPPELPVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 714
KSES +LPV+F DVS A++RIR GI ++ ++S+FLS++CGM+ V+LK +F+QFTGSFKERGARNAL+ L ++R RGV+AASAGNHALALA+HG LGIPVT MPT+AP+TKV KC+ G NVV G HI A ++A + P++K ++YINGYDD EIVAGAGTM +EIL
Sbjct: 46 KSES----QLPVNFSDVSTALYRIRSGIYNTECRKSYFLSEICGMD--VHLKMDFTQFTGSFKERGARNALLSLSVDQRSRGVMAASAGNHALALAYHGGSLGIPVTCFMPTVAPITKVEKCRKLGANVVIHGPHIGAAMEYAKTNPEYKELKYINGYDDPEIVAGAGTMAIEIL 214
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A6T9LTC0_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A6T9LTC0_9EUKA) HSP 1 Score: 207 bits (528), Expect = 1.780e-63 Identity = 103/164 (62.80%), Postives = 125/164 (76.22%), Query Frame = 1
Query: 223 VSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 714
V F D+ +A HRIR GIVR+ + SH+LS G ++YLK E QFTGSFKERG RNA++ L E R +GVIAASAGNHALALAWHG QLG+PVTVVMPT+AP+TKV KC+AFG NV+ G+HI +AKD A P+ YINGYDDVEI+AG GT+G+E+L
Sbjct: 53 VMFEDIVRAHHRIRSGIVRTPCESSHWLSKETG--CNIYLKTEQLQFTGSFKERGGRNAILSLSPEARSKGVIAASAGNHALALAWHGPQLGVPVTVVMPTVAPMTKVEKCRAFGANVIIQGEHIGDAKDWALGHPEHALKNYINGYDDVEIIAGTGTIGIEML 214
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A6T7Z001_9EUKA (Threonine ammonia-lyase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T7Z001_9EUKA) HSP 1 Score: 212 bits (540), Expect = 4.440e-63 Identity = 109/173 (63.01%), Postives = 131/173 (75.72%), Query Frame = 1
Query: 211 PELP----VSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHA-TSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 714
PELP V F D+ +A HRIR G+VR++ SH+LS L G ++Y K+E QFTGSFKERGARNA+M LD E+RK GVIAASAGNHALALAWHG QL +PVTVVMPT+AP+TKV+ C+AFG NV+ G HI EAK+ A T P M YINGYDD EI+AG GT+G+E+L
Sbjct: 27 PELPPDDCVKFEDIVRAHHRIRSGVVRTECSPSHWLSQLTG--CNLYFKKEQLQFTGSFKERGARNAIMSLDHEQRKAGVIAASAGNHALALAWHGPQLDVPVTVVMPTVAPMTKVSNCRAFGANVIIRGAHIGEAKEWALTGDPSLASMTYINGYDDPEIIAGTGTIGIELL 197 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8123.19467.1 >prot_Ecto-sp13_S_contig8123.19467.1 ID=prot_Ecto-sp13_S_contig8123.19467.1|Name=mRNA_Ecto-sp13_S_contig8123.19467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=238bp MAMRSAVRGVVGRPLVAPQSSARPVLSWAAARWKGSAATPKSESAAAAAAback to top mRNA from alignment at Ecto-sp13_S_contig8123:2..5491- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8123.19467.1 ID=mRNA_Ecto-sp13_S_contig8123.19467.1|Name=mRNA_Ecto-sp13_S_contig8123.19467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5490bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8123:2..5491- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8123:2..5491- >mRNA_Ecto-sp13_S_contig8123.19467.1 ID=mRNA_Ecto-sp13_S_contig8123.19467.1|Name=mRNA_Ecto-sp13_S_contig8123.19467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=714bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8123:2..5491- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |