prot_Ecto-sp13_S_contig8123.19467.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8123.19467.1
Unique Nameprot_Ecto-sp13_S_contig8123.19467.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length238
Homology
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: D8LCR6_ECTSI (Threonine ammonia-lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCR6_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 5.570e-144
Identity = 223/238 (93.70%), Postives = 226/238 (94.96%), Query Frame = 0
Query:    1 MAMRSAVRGVVGRPLVAPQSSARPVLSWAAARWKGSAATPKSESAXXXXXXKEDTKTKATEPDKSESATPPELPVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 238
            M MRSAVRGVVGRPLVAPQSSARPVLSWAAARWKGSAATPKSE+A  XXX KED K KA EPDK +  TPP+LPVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGME  VYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL
Sbjct:    1 MPMRSAVRGVVGRPLVAPQSSARPVLSWAAARWKGSAATPKSEAAAAXXXKKEDAKPKAAEPDKPQP-TPPDLPVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGME--VYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 235          
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A835YZY4_9STRA (Tryptophan synthase beta subunit-like PLP-dependent enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY4_9STRA)

HSP 1 Score: 258 bits (660), Expect = 4.340e-81
Identity = 126/168 (75.00%), Postives = 145/168 (86.31%), Query Frame = 0
Query:   71 PELPVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 238
            P  PV+F DVS AM+RIRDGIVR+   RSHFLS+LC  +A +YLKQEF+QFTGSFKERGARNALM L  EE++RGVIAASAGNHALALAWHG Q+GIPVTV MP +AP+TKV+KCK FG NVVQ G HI+EAKDHA SAP+F+GM+YINGYD  +I+AGAGTMGMEIL
Sbjct:   35 PVQPVTFEDVSTAMYRIRDGIVRTPCLRSHFLSELC--QADIYLKQEFTQFTGSFKERGARNALMKLTAEEKRRGVIAASAGNHALALAWHGRQMGIPVTVCMPVLAPMTKVSKCKVFGANVVQHGMHIIEAKDHAQSAPEFEGMKYINGYDHPDIIAGAGTMGMEIL 200          
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A4D9CYR3_9STRA (PALP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYR3_9STRA)

HSP 1 Score: 234 bits (597), Expect = 2.690e-72
Identity = 113/165 (68.48%), Postives = 139/165 (84.24%), Query Frame = 0
Query:   74 PVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 238
            PV+F DVS AM RIR+GI+R+   +SHFLSD+C    ++Y+K EFSQFTGSFKERGARNAL+ L EEE+KRGV+AASAGNHALAL+WHG QLGIPV+V MP +APL KV+KC+ FG NV+  GQHI EAKD A S P+++G++YINGYDD EIVAGAGT+G+E+L
Sbjct:   97 PVTFEDVSTAMFRIRNGILRTPCYKSHFLSDICN--TNLYVKTEFSQFTGSFKERGARNALLLLTEEEKKRGVMAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDFALSNPEYEGVKYINGYDDPEIVAGAGTIGIEVL 259          
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A7S3XW64_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW64_HETAK)

HSP 1 Score: 224 bits (572), Expect = 1.090e-67
Identity = 111/166 (66.87%), Postives = 136/166 (81.93%), Query Frame = 0
Query:   73 LPVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 238
            +PV+F DVSKAM+ IR GIVR+  KRSH+LS++CGM+  +++K EF+QFTGSFKERGARNAL+ L++EER +GV+AASAGNHALALA HG  LGIPVT  MPTIAPLTKV KC   G N+V  G HI EAK  A + P ++G++YINGYDD EI+AGAGTMG+EIL
Sbjct:   52 MPVTFEDVSKAMYLIRSGIVRTTTKRSHYLSEMCGMD--LFIKNEFTQFTGSFKERGARNALLSLNDEERAKGVMAASAGNHALALARHGGLLGIPVTCFMPTIAPLTKVQKCGKLGANIVIHGAHIGEAKIEAETNPAYEGLKYINGYDDPEIIAGAGTMGIEIL 215          
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A7S0NX73_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NX73_9EUKA)

HSP 1 Score: 215 bits (547), Expect = 5.650e-67
Identity = 108/164 (65.85%), Postives = 128/164 (78.05%), Query Frame = 0
Query:   75 VSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 238
            V F DV +A HRIR GIVR+  ++SH+LS   G   ++YLK E  QFTGSFKERG RNAL+ L E +R  GVIAASAGNHALAL+WHG QLG+PVTV MPT AP+ KV KC+AFG +VV  G HILEAK HA  + +F+G+RYINGYDD EI+AGAGTMGME+L
Sbjct:   26 VRFEDVVRASHRIRSGIVRTPCEKSHWLSQTTG--CNLYLKMEQQQFTGSFKERGGRNALLSLPESKRSAGVIAASAGNHALALSWHGPQLGVPVTVCMPTTAPMAKVEKCRAFGADVVLHGAHILEAKAHAERS-EFEGLRYINGYDDPEIIAGAGTMGMELL 186          
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: R1FA18_EMIHU (Threonine ammonia-lyase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FA18_EMIHU)

HSP 1 Score: 219 bits (559), Expect = 7.940e-66
Identity = 105/164 (64.02%), Postives = 133/164 (81.10%), Query Frame = 0
Query:   75 VSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 238
            V F DV +A HRIR GIVR++ + S+ LS++ G   S++LK+E SQ TGSFKERGARNA+M L EE+R+RGVIAASAGNHALALAWHG+QLG+PVTVVMPT+AP+TKV  C+ FG N++  G HI EAKD+A   P  +G+ YINGYDDVE++AG GT+G+E+L
Sbjct:   32 VRFEDVVRAHHRIRSGIVRTECRPSYHLSNMTG--CSIHLKKEQSQVTGSFKERGARNAIMSLSEEQRRRGVIAASAGNHALALAWHGSQLGVPVTVVMPTVAPMTKVQNCRLFGANIIIHGGHIGEAKDYALQDPALQGLTYINGYDDVEVIAGTGTLGIEML 193          
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A7S4AXS5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4AXS5_CHRCT)

HSP 1 Score: 217 bits (553), Expect = 5.510e-65
Identity = 109/164 (66.46%), Postives = 129/164 (78.66%), Query Frame = 0
Query:   75 VSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 238
            V F DV +A HRIR G+VR+  + SH+LS   G +  +YLK E  QFTGSFKERGARNAL+ L  +ER RGVIAASAGNHALAL+WHG QL IPVTV MP  AP+ KV+KC+AFG NVV  GQHILEA++H T  P++ GMRYING+DD EIVAGAGT+GME+L
Sbjct:   42 VKFEDVVRASHRIRGGVVRTQCELSHWLSKTTGCQ--LYLKHEQQQFTGSFKERGARNALLSLPHDERHRGVIAASAGNHALALSWHGPQLDIPVTVCMPVTAPMAKVDKCRAFGANVVLHGQHILEAREH-TQRPEYDGMRYINGFDDPEIVAGAGTLGMEML 202          
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A7S2UYL9_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYL9_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.430e-64
Identity = 108/175 (61.71%), Postives = 139/175 (79.43%), Query Frame = 0
Query:   64 KSESATPPELPVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 238
            KSES    +LPV+F DVS A++RIR GI  ++ ++S+FLS++CGM+  V+LK +F+QFTGSFKERGARNAL+ L  ++R RGV+AASAGNHALALA+HG  LGIPVT  MPT+AP+TKV KC+  G NVV  G HI  A ++A + P++K ++YINGYDD EIVAGAGTM +EIL
Sbjct:   46 KSES----QLPVNFSDVSTALYRIRSGIYNTECRKSYFLSEICGMD--VHLKMDFTQFTGSFKERGARNALLSLSVDQRSRGVMAASAGNHALALAYHGGSLGIPVTCFMPTVAPITKVEKCRKLGANVVIHGPHIGAAMEYAKTNPEYKELKYINGYDDPEIVAGAGTMAIEIL 214          
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A6T9LTC0_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A6T9LTC0_9EUKA)

HSP 1 Score: 207 bits (528), Expect = 1.780e-63
Identity = 103/164 (62.80%), Postives = 125/164 (76.22%), Query Frame = 0
Query:   75 VSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 238
            V F D+ +A HRIR GIVR+  + SH+LS   G   ++YLK E  QFTGSFKERG RNA++ L  E R +GVIAASAGNHALALAWHG QLG+PVTVVMPT+AP+TKV KC+AFG NV+  G+HI +AKD A   P+     YINGYDDVEI+AG GT+G+E+L
Sbjct:   53 VMFEDIVRAHHRIRSGIVRTPCESSHWLSKETG--CNIYLKTEQLQFTGSFKERGGRNAILSLSPEARSKGVIAASAGNHALALAWHGPQLGVPVTVVMPTVAPMTKVEKCRAFGANVIIQGEHIGDAKDWALGHPEHALKNYINGYDDVEIIAGTGTIGIEML 214          
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Match: A0A6T7Z001_9EUKA (Threonine ammonia-lyase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T7Z001_9EUKA)

HSP 1 Score: 212 bits (540), Expect = 4.440e-63
Identity = 109/173 (63.01%), Postives = 131/173 (75.72%), Query Frame = 0
Query:   71 PELP----VSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHA-TSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL 238
            PELP    V F D+ +A HRIR G+VR++   SH+LS L G   ++Y K+E  QFTGSFKERGARNA+M LD E+RK GVIAASAGNHALALAWHG QL +PVTVVMPT+AP+TKV+ C+AFG NV+  G HI EAK+ A T  P    M YINGYDD EI+AG GT+G+E+L
Sbjct:   27 PELPPDDCVKFEDIVRAHHRIRSGVVRTECSPSHWLSQLTG--CNLYFKKEQLQFTGSFKERGARNAIMSLDHEQRKAGVIAASAGNHALALAWHGPQLDVPVTVVMPTVAPMTKVSNCRAFGANVIIRGAHIGEAKEWALTGDPSLASMTYINGYDDPEIIAGTGTIGIELL 197          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8123.19467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCR6_ECTSI5.570e-14493.70Threonine ammonia-lyase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YZY4_9STRA4.340e-8175.00Tryptophan synthase beta subunit-like PLP-dependen... [more]
A0A4D9CYR3_9STRA2.690e-7268.48PALP domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7S3XW64_HETAK1.090e-6766.87Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0NX73_9EUKA5.650e-6765.85Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
R1FA18_EMIHU7.940e-6664.02Threonine ammonia-lyase n=2 Tax=Emiliania huxleyi ... [more]
A0A7S4AXS5_CHRCT5.510e-6566.46Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S2UYL9_9STRA1.430e-6461.71Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A6T9LTC0_9EUKA1.780e-6362.80Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A6T7Z001_9EUKA4.440e-6363.01Threonine ammonia-lyase n=1 Tax=Prymnesium polylep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001926Pyridoxal-phosphate dependent enzymePFAMPF00291PALPcoord: 89..238
e-value: 1.1E-35
score: 123.5
NoneNo IPR availableGENE3D3.40.50.1100coord: 125..221
e-value: 4.2E-51
score: 175.7
NoneNo IPR availableGENE3D3.40.50.1100coord: 80..238
e-value: 4.2E-51
score: 175.7
NoneNo IPR availablePANTHERPTHR43419:SF15coord: 75..238
NoneNo IPR availablePANTHERPTHR43419FAMILY NOT NAMEDcoord: 75..238
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILY53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 76..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8123contigEcto-sp13_S_contig8123:2..5491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8123.19467.1mRNA_Ecto-sp13_S_contig8123.19467.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8123 2..5491 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8123.19467.1 ID=prot_Ecto-sp13_S_contig8123.19467.1|Name=mRNA_Ecto-sp13_S_contig8123.19467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=238bp
MAMRSAVRGVVGRPLVAPQSSARPVLSWAAARWKGSAATPKSESAAAAAA
KKEDTKTKATEPDKSESATPPELPVSFLDVSKAMHRIRDGIVRSDMKRSH
FLSDLCGMEASVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAAS
AGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHIL
EAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001926PLP-dep
IPR036052Trypto_synt_PLP_dependent