mRNA_Ecto-sp13_S_contig8115.19459.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8115.19459.1
Unique NamemRNA_Ecto-sp13_S_contig8115.19459.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: D7FK70_ECTSI (tRNA-splicing endonuclease positive effector n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK70_ECTSI)

HSP 1 Score: 797 bits (2058), Expect = 1.760e-283
Identity = 428/461 (92.84%), Postives = 437/461 (94.79%), Query Frame = 1
Query:    1 DRIEQVKRAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRGDIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGEANASVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVE 1383
            DRIEQ++RAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRG+IAN+VAGVTAEAGLSKVQT+AIRQAL SRLTLIQGPPGTGKTKTACNL+LSAVRLRQSKGGAR DGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDV+AAKGWVKEVSQS ESSA SEARRPSTTRG     XXXXXXXX             LEAAQL AARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGE++A VGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVE
Sbjct:  187 DRIEQMERAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRGNIANVVAGVTAEAGLSKVQTRAIRQALESRLTLIQGPPGTGKTKTACNLILSAVRLRQSKGGARRDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVVAAKGWVKEVSQSTESSAASEARRPSTTRGSAGSKXXXXXXXXTPSQSASRRAYAVLEAAQLEAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGESHAGVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVE 647          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A6H5L473_9PHAE (AAA_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L473_9PHAE)

HSP 1 Score: 702 bits (1812), Expect = 5.160e-249
Identity = 396/494 (80.16%), Postives = 404/494 (81.78%), Query Frame = 1
Query:    1 DRIEQVKRAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRGDIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQ---------------------LPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGE-----ANASVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVEVRFSSKG 1404
            DRIEQVK+AGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFP PECSRGDIANIVAGVTAEAGLSK  T+AIRQALGSRLTLIQGPPGTGKTKTACNL+LSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDV+AAKGWVKEVSQSAESSA SEARRPST+RG                          LEAAQL AARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQ                     LPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNR                                PAGFPWPAASGPVAFVRVSESGGE     +NA VGGA+RGQLESRGGTEAAVQGGSFASAALGTSYCN+REAEAVAFALELLLREGDVEVRFSSKG
Sbjct:  174 DRIEQVKKAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPRPECSRGDIANIVAGVTAEAGLSK--TRAIRQALGSRLTLIQGPPGTGKTKTACNLILSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVVAAKGWVKEVSQSAESSAESEARRPSTSRGSAGSKPRNSSATTPSQSASRRAYAV-LEAAQLEAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQNSTRPPLFPPLRPRFIGDGPQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRLI------------------------------PAGFPWPAASGPVAFVRVSESGGEREKRESNAGVGGAKRGQLESRGGTEAAVQGGSFASAALGTSYCNLREAEAVAFALELLLREGDVEVRFSSKG 634          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: W7TMD0_9STRA (Regulator of nonsense n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMD0_9STRA)

HSP 1 Score: 261 bits (667), Expect = 3.370e-74
Identity = 172/390 (44.10%), Postives = 219/390 (56.15%), Query Frame = 1
Query:   79 APDAEWARIALGLSRFPGPECSRGDIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRA------IGG--------DQEGGFSS------IRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGI-RASDRPTPAGFPWPAASGPVAFVRV 1185
            A  + W  +A   S  P    +R     IV+   A   L++ Q +A+R AL  +L+LIQGPPGTGKT+TAC+L+  AV+L Q +      GKV+A AFSNVAADNLLEG L LGL A+R+GR AT+RP L + TLDAL+  H  V   K       +  E+  GS AR     +                           LE A+L AA  I+  ADVVV +C+GA N+  + A      +GG        ++   FSS      ++F TV+IDEA+QATE A LVP+ +GC+QLVLVGD  QLPPT+    A   GLG SLF+RL  AGI+P LL  QYRMHP I+ FPS  FY G + +    A  RP P GFPWP  + PVAFV V
Sbjct:  478 ATKSSWEALA---SAVPKTSFARKAADQIVSQEVARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDA----GKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVTTFK-------KKLEAVRGSTARDVQAAK-------------------------RDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGXXXXXXXWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAV 828          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A0U9HIU8_KLENI (RNA helicase nonsense mRNA reducing factor n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HIU8_KLENI)

HSP 1 Score: 246 bits (629), Expect = 1.540e-69
Identity = 159/396 (40.15%), Postives = 214/396 (54.04%), Query Frame = 1
Query:   13 QVKRAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECS--RGDIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVI-AAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSE 1191
            QV + GG     G+T  P+ + A    WA          G E    +G +   +A +    G++K Q KAI  A+  RLTL QGPPGTGKT+T  + LL + RL      AR    ++A A SN+A DNLLEG LELGL+ +RIG+P  ++ TL HATL+AL+ +HP +  AA    + V+ SAE+       +    RG                           E A+  A ++++  ADV+V +CIGAG+                   F   VIDEATQAT+ ++LVP++ G   +VLVGDQ QLPPTVI  EA   GL  SLF  L  +G+K  LL+ QYRMHPA++ FPS HFYDG++T+     DRP P  F WP AS P+AF+  S+
Sbjct:  345 QVLQTGGAVDSAGET--PEKMAAKAPPWAS---------GKELGSLKGGVRKQLAKLEERGGVNKSQAKAIEAAMTRRLTLWQGPPGTGKTRTLLHFLLLSTRLL-----AREHKPILACADSNIAVDNLLEGLLELGLKVVRIGQPVKVKATLRHATLEALIADHPQMARAASLRGQSVTASAEARGSRSWSKERQQRGDAAMKAWRAS-----------------EDAEAIAIKEVLDDADVIVATCIGAGDPVL------------EGRTFRVCVIDEATQATQPSSLVPLVGGADNVVLVGDQKQLPPTVISLEAAKAGLEVSLFEELQRSGVKTFLLDTQYRMHPALAAFPSQHFYDGRLTSFPTPEDRPAPKRFAWPDASRPIAFLDCSD 695          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A075FWN5_9EURY (Regulator of nonsense transcripts 1 (UPF1, RENT1) n=8 Tax=root TaxID=1 RepID=A0A075FWN5_9EURY)

HSP 1 Score: 237 bits (605), Expect = 1.180e-67
Identity = 147/332 (44.28%), Postives = 191/332 (57.53%), Query Frame = 1
Query:  193 LSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWD-GKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRV 1185
            L++VQ +A R A+ SRLTLIQGPPGTGKT TA  +L         +  A+ D G V+A A SNVA DNLLEG L LG+RA+R+G+P  +R  L  AT+DA +E HP       W++        S    +RR    RG                          +   +      I+  A V+ C+CIG+G++                 RFS V+IDEATQATE AALVP++RG +Q+VLVGD  QLPPTVI   A++GGLG SLF R++  GI+P LL  QYRMHPAIS+FP+  FY+G++  GI ASDR TPAG  WP    P+AF+ +
Sbjct:  200 LNEVQREAARAAMDSRLTLIQGPPGTGKTYTAVRIL---------ENWAKQDIGTVLAVADSNVAVDNLLEGLLSLGVRAVRLGQPVKVRENLREATMDARMEEHPLRRDLDHWLE--------SNEKLSRRVKGMRGKEKGLAHRDLSRGWKE----------VRKIESQMRDDILDRAQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPAALVPLVRGARQVVLVGDHRQLPPTVISQRAQNGGLGRSLFERMVEIGIEPHLLRVQYRMHPAISEFPNERFYEGRLEDGIAASDRQTPAGLLWPDWECPMAFLPI 492          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A2V3I143_9EURY (Helicase ATP-binding domain-containing protein n=8 Tax=root TaxID=1 RepID=A0A2V3I143_9EURY)

HSP 1 Score: 236 bits (602), Expect = 3.210e-67
Identity = 146/352 (41.48%), Postives = 194/352 (55.11%), Query Frame = 1
Query:  193 LSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWD-GKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGEANASVGGARRGQLE 1245
            L+K Q +A   AL  RLTLIQGPPGTGKT T   +L         +  A+ D G ++A A SNVA DNLLEG L LG+RA+R+G+P  +R +L  AT+DA +E HP       W++   +      G + +    T                            +   +      I+  + V+ C+CIG+G++                 RFS V+IDEATQATE AALVP++RG +Q+VL+GD  QLPPTVI   AE+GGL  SLF RL+  GI+P+LL  QYRMHPAIS FP+ HFYD  +  G+ + DRPTPAG  WP    P+AF+ V+  GGE  A  G ++    E
Sbjct:  200 LNKAQREAALAALERRLTLIQGPPGTGKTHTGVRIL---------EAWAKQDPGTILAVADSNVAVDNLLEGLLSLGIRAVRLGQPVKVRESLREATMDARMEEHPLRRDLDHWLESNEKLGRRVKGMKGKEKGLT------------------YRELSRGWKEVRRIESQMRDDILNRSQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPAALVPLVRGARQIVLIGDHRQLPPTVISQRAENGGLNRSLFERLVEMGIEPLLLRTQYRMHPAISAFPNGHFYDDLLEDGVTSEDRPTPAGLLWPDWDMPIAFLPVT--GGEVKAPDGASKENPTE 510          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A2E0PQ68_9EURY (AAA domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E0PQ68_9EURY)

HSP 1 Score: 232 bits (592), Expect = 9.200e-66
Identity = 139/333 (41.74%), Postives = 192/333 (57.66%), Query Frame = 1
Query:  190 GLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWD-GKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRV 1185
            G+++ Q  A + AL  RLTLI GPPGTGKT TA  +L S          A+ D G V+A A SNVA DNLLEG L+ G+RA+R+G+P  +R  L  AT+DA +E+H      +  V+E+ ++ + S   +  R    +G                          +   +     +I+  A V+ C+CIG+G++                 RFS V+IDEATQATE A LVP++RG +Q+V+VGD  QLPPTV+   AE+GGL  SLF RL+  G+  ILL+ QYRMHP+IS+FP+ HFYDG++  GI AS+RPTP+G  WP    PV F+ +
Sbjct:  199 GMNEAQRLATQSALSCRLTLIHGPPGTGKTHTAVRILES---------WAKQDLGSVLAVADSNVAVDNLLEGLLDRGVRAVRLGQPVKVRENLRQATIDARMESHE---LNRDLVEEIERNEKLSRKIKGMRGGKEKGLAHRDLSRGWKE--------------VRRIERQIRDEILDRAQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPATLVPLVRGARQVVMVGDHKQLPPTVVSRRAENGGLTRSLFERLVDMGVSTILLDTQYRMHPSISEFPNSHFYDGELMDGIEASERPTPSGLLWPDWDIPVCFIPI 493          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A520UNT6_9ARCH (AAA domain-containing protein (Fragment) n=1 Tax=Candidatus Poseidoniales archaeon TaxID=2163009 RepID=A0A520UNT6_9ARCH)

HSP 1 Score: 232 bits (591), Expect = 9.990e-66
Identity = 141/338 (41.72%), Postives = 188/338 (55.62%), Query Frame = 1
Query:  175 VTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWD-GKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRV 1185
            V+  + L++ Q +A + A+ SRLTLIQGPPGTGKT TA  +L         +  A+ D G V+A A SNVA DNLLEG L LG+RA+R+G+P  +R +L  AT+DA +E HP       W++   + +    G + +                                 +   +      I+  A V+ C+CIG+G++                 RFS V+IDEATQATE AALVP++RG +Q+VLVGD  QLPPTVI   A  GGLG SLF R++  GI P LL  QYRMHPAIS FP+ HFY+G++  G+  SDR  PAG  WP    P+AF+ V
Sbjct:  283 VSLASDLNEAQREAAKAAVDSRLTLIQGPPGTGKTHTAVRIL---------EAWAKQDIGTVLAVADSNVAVDNLLEGLLSLGVRAVRLGQPVKVRESLREATMDARMEEHPLRRDLDHWLESNEKLSRRVKGMKGKEKGLAH------------------RDLSRGWKEVRKIESQMRDDILDRAQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPAALVPLVRGARQIVLVGDHRQLPPTVISRRAGSGGLGRSLFERMVEIGISPHLLRIQYRMHPAISAFPNEHFYEGKLEDGVEVSDRVAPAGLLWPDWECPIAFLPV 581          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A0G4FCG3_VITBC (SAP domain-containing protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FCG3_VITBC)

HSP 1 Score: 239 bits (611), Expect = 1.050e-65
Identity = 152/367 (41.42%), Postives = 205/367 (55.86%), Query Frame = 1
Query:  205 QTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDG---------------------KVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQ-------------SAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQ-EGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGG 1200
            Q +A+R++L  R+TLIQGPPGTGKT+T+C LL S V L ++   AR  G                     KV+A AFSNVAADNLLEG +++G++A+R GR   + P L + T+DA+V+ HP+  AA    +E  Q             S E  A S+A+     R                           ++ A+  A   I+  ADVVV S I AG           + +     ++FSTV+IDEA+Q TE AA VP+++GC+QL+LVGDQNQLP TV+  +A+  GL  SLFSRL+ AG+ P++L  QYRMHPAI+ FPS  FYD ++ +  +  +RPTP GFPWP    PVAFV V E  G
Sbjct:  653 QEEAVRRSLTQRVTLIQGPPGTGKTRTSCLLLGSIVALMKA---ARAQGIQPCGDLPAALSATGPPPRIEKVLAAAFSNVAADNLLEGLIKMGVKAVRSGRALVVNPALKNYTVDAMVDQHPEYRAALAHEREARQRRQQLYRAHQDDTSDEDKAASQAKLDEANR-------------------LLRLAEEDVKVAEQRAIYDIVTKADVVVTSAISAGQPGLTSTTQVPEWDTQRVPVKFSTVLIDEASQVTEPAASVPMVKGCEQLILVGDQNQLPATVVSDKAKAEGLNLSLFSRLVLAGVVPVMLAAQYRMHPAIAMFPSFEFYDDRLISIPKPEERPTPGGFPWPDDVKPVAFVSVMEPAG 997          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A0G4HN17_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HN17_9ALVE)

HSP 1 Score: 239 bits (611), Expect = 1.140e-65
Identity = 170/441 (38.55%), Postives = 228/441 (51.70%), Query Frame = 1
Query:  193 LSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLL------LSAVRLRQSKGGARWDG------------------------KVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAES----SAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLE-------AAQLAAARQIIKGADVVVCSCIGAGNDAFVRAI---GGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGEANASVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVE 1383
            L   Q  A+R AL  RLTLIQGPPGTGKT+T+C +L      +   RLR  +   R++                         K++A AFSNVAADN+LEG L++G++A+R+GR   + P L++ T DALV  HP+V AA   ++EVS  A          + + P   +G                          +         A+  A  +I+  ADVVV SC+GAG   FV A+   G D E   S I FSTV++DEA+Q TE AALVP++ G +Q++LVGDQNQLPPTV     ++  L  SLF RL+ AG+KP +L RQYRMHP I+ FPS  FY G++ +  +A DRP P G  WP  + PV    V++                LESR    A  +GG        TSY N REA  +   L  LL EG+++
Sbjct: 1488 LDPSQDVAVRAALSRRLTLIQGPPGTGKTRTSCLILGTLAQMMRTARLRGHEPVNRFEKLFTIESKEKEQALRSIPPQPPKLEKILAAAFSNVAADNILEGLLKMGVKAVRVGRSNVVNPLLYNYTADALVRQHPEVKAAVRHLREVSDRARELRLFGMKPDEKGPLLPQGVARNETEELLTFKEKEFARKKKMQEHVRLAEEDVRVAEKRALWRIMASADVVVSSCMGAGKVDFVNALECPGWDPER--SPISFSTVLLDEASQVTEPAALVPLVTGAEQVILVGDQNQLPPTVTTESVKEKCLDVSLFVRLVLAGVKPFMLGRQYRMHPVIAAFPSAQFYGGKLESVPKAEDRPAPRGVLWPDRNAPVMMAAVTDE------------TLHLESR----ADWKGGGDT-----TSYQNKREATVILQLLRSLLAEGEIK 1905          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK70_ECTSI1.760e-28392.84tRNA-splicing endonuclease positive effector n=1 T... [more]
A0A6H5L473_9PHAE5.160e-24980.16AAA_11 domain-containing protein n=1 Tax=Ectocarpu... [more]
W7TMD0_9STRA3.370e-7444.10Regulator of nonsense n=2 Tax=Monodopsidaceae TaxI... [more]
A0A0U9HIU8_KLENI1.540e-6940.15RNA helicase nonsense mRNA reducing factor n=1 Tax... [more]
A0A075FWN5_9EURY1.180e-6744.28Regulator of nonsense transcripts 1 (UPF1, RENT1) ... [more]
A0A2V3I143_9EURY3.210e-6741.48Helicase ATP-binding domain-containing protein n=8... [more]
A0A2E0PQ68_9EURY9.200e-6641.74AAA domain-containing protein n=1 Tax=Euryarchaeot... [more]
A0A520UNT6_9ARCH9.990e-6641.72AAA domain-containing protein (Fragment) n=1 Tax=C... [more]
A0A0G4FCG3_VITBC1.050e-6541.42SAP domain-containing protein n=4 Tax=Vitrella bra... [more]
A0A0G4HN17_9ALVE1.140e-6538.55Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8115contigEcto-sp13_S_contig8115:14..7066 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score802.0
Seed ortholog evalue1.5e-229
Seed eggNOG ortholog2880.D7FK70
Model size1407
KEGG koko:K14326
KEGG Pathwayko03013,ko03015,map03013,map03015
KEGG ModuleM00430
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
EggNOG OGsCOG1112@1,KOG1802@2759
Cds size1407
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8115.19459.1prot_Ecto-sp13_S_contig8115.19459.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8115 14..7066 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464084.2195814-CDS-Ecto-sp13_S_contig8115:13..2221681464084.2195814-CDS-Ecto-sp13_S_contig8115:13..222Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8115 14..222 -
1681464084.2414746-CDS-Ecto-sp13_S_contig8115:691..8551681464084.2414746-CDS-Ecto-sp13_S_contig8115:691..855Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8115 692..855 -
1681464084.2516565-CDS-Ecto-sp13_S_contig8115:1360..14641681464084.2516565-CDS-Ecto-sp13_S_contig8115:1360..1464Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8115 1361..1464 -
1681464084.2671928-CDS-Ecto-sp13_S_contig8115:2158..22851681464084.2671928-CDS-Ecto-sp13_S_contig8115:2158..2285Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8115 2159..2285 -
1681464084.2774193-CDS-Ecto-sp13_S_contig8115:2807..30931681464084.2774193-CDS-Ecto-sp13_S_contig8115:2807..3093Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8115 2808..3093 -
1681464084.2876327-CDS-Ecto-sp13_S_contig8115:4581..47441681464084.2876327-CDS-Ecto-sp13_S_contig8115:4581..4744Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8115 4582..4744 -
1681464084.2981539-CDS-Ecto-sp13_S_contig8115:5639..57861681464084.2981539-CDS-Ecto-sp13_S_contig8115:5639..5786Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8115 5640..5786 -
1681464084.3076584-CDS-Ecto-sp13_S_contig8115:6084..62061681464084.3076584-CDS-Ecto-sp13_S_contig8115:6084..6206Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8115 6085..6206 -
1681464084.3173206-CDS-Ecto-sp13_S_contig8115:6981..70661681464084.3173206-CDS-Ecto-sp13_S_contig8115:6981..7066Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8115 6982..7066 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8115.19459.1

>prot_Ecto-sp13_S_contig8115.19459.1 ID=prot_Ecto-sp13_S_contig8115.19459.1|Name=mRNA_Ecto-sp13_S_contig8115.19459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=469bp
DRIEQVKRAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRG
DIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLL
LSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPA
TIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTR
GSAGSKPRNSSATTTPSQSASRRAYAVLEAAQLAAARQIIKGADVVVCSC
IGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQ
QLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMH
PAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGG
EANASVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFA
LELLLREGDVEVRFSSKG*
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mRNA from alignment at Ecto-sp13_S_contig8115:14..7066-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8115.19459.1 ID=mRNA_Ecto-sp13_S_contig8115.19459.1|Name=mRNA_Ecto-sp13_S_contig8115.19459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7053bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8115:14..7066- (Ectocarpus species13 EcNAP12_S_4_19m)
GACCGCATTGAGCAGGTGAAGAGGGCGGGAGGCGTGCAGCCAGGGGTCGG GGACACGGCGCTTCCGCAAGGGGTGGTGGCCCCAGGTAAGAAGAAACTTT TCATGTTTGTCGTGTGTTTTTTTTATTATTCAACATTACAAAAAGTAGCA TCGACCGCGCTAACCGAGCGACCAATGAAAAGACGTCGGTACCGGCGGGT AAAATTCAGGGTGTGCGTGCGTGTTGTCTTCCCTTTGTTGATATCGACCG CGCTATCCGGCTGACCAGTTAACAGCCTTCAGTCTTTCAGCGTACGAAAA CTCAAACTGGAAAATGTGTTCTCTTATCGGGCGTATATATACTTGAGTTC CGATGGCGCTTCTTTTTTATGCTTACCTTAGCCGTCACGATCTTGAGTGC GTCGGGGTAATAGTCCACCCGCCCCACCGCCAGAAGAGCGAAAACGAGAA TGCTGCTTGGGCAAGGCAGGCGTGCTTTGCATGCAAGCGTGAGGTACGAT GCCGCGATGCAAGAAACTTCTGTCTCCTCCGTGAAGCTTTTGTCTAAAGC GCCGCAATTCGATGTGTACCTTCTATTATAAATACGAGGACAGAGTTGAG ACCGAAGGGCACCTCGCGTGCATTGAGTCGTACCCGTAACTGCCGCACAT CACACCCGCTGCTGTCCACAGACTTGCTTGTCTCGTTGGCTGCACAAGCC TCGGGTGCGCCCCGCCCCTTGTTTCTTATGGGCCATTCCCTATGTACGCG CGTGTGATGCTTGCGTCTTTGTTCTTAGAGTGACTAATTTTTTTTTGTCG TTTTTTTCCCGCCGCATTCGTCTGCATTCCGCCGAATTCTCCCGTTGCAT TGCCCTCCAGACGCGGAGTGGGCGAGGATAGCGCTGGGGCTCAGCCGTTT CCCGGGACCCGAGTGCTCGAGGGGGGACATCGCCAACATTGTCGCGGGAG TCACTGCCGAGGCTGGCCTCAGCAAGGTCCAGGTGAGTTTTTTTTCTCGC TAAATCACACAAACAAATATTCTTATTTTCATGTTTTCCACACATCAGAG ACCCCGGAATAAACGTGAATTCGATTTTTTTTTGTTTAGTTTCGTTTAGT TTCGGGGACTTAGTGTGTCATTAGGCATTTTTCTGACTGTGAGGTGCGTA GATGTGTAGCATCACTGCGCCCAAAGTTTGGCAACAACGACATTCCCCCC CCCCTCTCACCGCACACATACGCGTCAAACGCCAATATCCCCACGTGAAC GAAATCTGCCATGTTTTGTTGGACGCACAGACAAAAGCTATCCGGCAGGC GCTGGGGAGTCGTCTGACGCTGATCCAGGGTCCTCCTGGGACGGGGAAGA CGAAGACGGCGTGCAACCTTCTACTGTCGGCGGTCAGACTCCGCCAGAGC AAGGGGGGCGCTCGATGGGACGGGAAGGTACTGCTGCTGTCGCGGGGGTA GTGCTGTGTGTCTGGTTTCGATGCTTTTGTTACTGCTGTTCCTGCTACTG TGGTACTGTCGTTGTTGCATTCCGTTGTTATTATCGCTGTTGGTATGGCA CTGTTTGTTGTTGGTGTACCCACGTGATGCTTCTTCGTGTGTGTTTTCCG CGGAGGCAAGCCGTAATCATAGCTAGGGAGGGGTGCGAAGACACGCCTAG TCTGCCCTTGTTATTTTTCCGCTCATTGTTTGGGGTCTGTATGCGTATGT AGTCATGGCGTGGTTGATGCAGCAGCTGAAGTGCACCCTTCGGCTAAACA CCATGAAGCCTCCCATGCGGCAGCTAGGCAGCGTCACAAACACAGACAAC GCAATATGCCGAGAATTCCCTCCCGCCCTCCGCCCCCAAAATTGCCTCCC ATTCGTCTCCGCCAATGACTCATGCAACGGTAGTAGGGGTGCACGAATTG CTTCTCAGTCTCGAAAGAAAGAAGCTGAATATCTCAGCCTGAAATGGAAA CGGAGAACGTTCAACGCGATAAGTTATCCGATGGGCTTTGTATGTGTAGA TCAAACGCGATTGATAATTCACAATGGGAATCGATGTTCGAAAATCATGG GGTGAGTAACTCAATCTGAACAACCCGACTAAAGTGATGGTCCCGATTTC AGTAGTGGCATGTAGGGGCAAGAGCAAAATATGCAACTTCTAAGGGCAGC AGTGCCACTATTCGATATAAGGGCTCCATGTACATTTTGAGATTGTGGCA GAGATTTTGATGCCACTCTCTCGGGCATTTCACAATTCAAGGTACCACTT TGTCGGGACCACTCCTGTACACCCTCGATGACACCATAGCTTCTCTCTCT CTGCCCGCATTGTCCTACAAAGGTGATGGCGACCGCGTTCAGCAACGTCG CGGCCGACAACCTGTTGGAGGGCGCCCTCGAGCTAGGACTGCGCGCTCTC AGGATCGGGCGACCCGCCACGATCCGCCCTACCCTGTGGCACGCCACGCT CGACGCTCTCGTGGAGAACCACCCGGATGTTATCGGTGAGTCACCCGAAC AAAAAAAAAAAAGAGCCGTCCCAATAAAACATGTGAAATACATTGAACCA AAGAAAACGTCCCTATTGTACTTTTAGTGAAGTTGTCGGTGAGCCACCCT CAAAACGAAAAAACTTTGCGTAAGAAAAAAAAAATGTCGTCGTCGGCGCG GCGCTAGTGAAAAGCCACCCTGGAAGGTATTGGTGAGTCACCCTAATAGT AACAAAAAAAAAGGTGAGCGACCCTAATACACAAAAAGATAAAAAAAAAC ATGGAACGATGCAAACGTCCCTAACAATGTAAAGTTGTCGGTGACCCACC CTTCTACACCAAAAAGCACATGAAAAAAAAAATGTTGTCGTCAGCGCGGC GCCAGTGGAGAGCCACCCCGGAAGCTGCTGGTGAGCCACCCGTATCATAA AACATGAATACTGTAATGAACATTGAAAATTGTGGAAACACAGGCAGTGC TCCGCTGACGCGATTGATTCATTTCTATTTCGTATCAGACCTTCATGTAT GGATAGAGATAAATGGATTTATTGTTGATATGATCACGAAGACAACAAGA GTTCCTAGTGAGGCTCCCGGGAAGAACCACCTGTCGGTGAGCCACCCTCT ACCCACCCTTGAAAAAATACAACAAAGGTAGTCCCTATTTTTGTTTCGAG GTTTACACGCGTAGCAACCCCTGAAGACCCTGATGTAGAAACCCTTTTGA TTTTCTCGTGTGTTTTTCGCGGAACAGCAGCTGCCCACAACACCCGATGT TCTGAGAAACTGCTGTTCCACGAAACACACACGAGAAAATCAGCGAGTGT TCCTTCATCAGGGCCTTCATGGATTGCTGTACGCGTGAAAACCTCCCAAC ATTCGTGCTGTGTCGGCAGTAAGGAATTAGCTGTCCTCGTTGTCTTTTTT GCGGTGGCGGGAGAGCCCGGGTCATTTTGTCTTCAGGGGGCGGCGTTGTC TCATTTTATAATCTTTGGTGACGGCATGCATCACCGTGGCGATGTGGTGA TGGTAGTGGGGATGCTGTGTCACAGCAGTCCGTCTACGAGGCAGCCAAAG CAGCTTAATGCGGCGGTAGTTTGTCGCGAGAGTCAACACAACGGCGTTGA TCTTGAAAGGAATGGTTGGATATGGATATGTTGGCTGGTGTCCTCAAGTG TTGCTGGTACGCATGCGTCTGATGTGTGAAAATATATATATATATATTGT TGTGGTCTTCACATAAAAAAAAACGTTTGTGGGGATGAATATTTTTCATC CGAGTAAATTGCGGCGTCGCAGCAGCGTTGGTTGCTCCCTCCTACGTGCA TTCGCCTTTCAGTACGCGACAGACGACGTTGACGACTAGCGTGTGTATCT TGCGCATGTACCTCTCTTTCTTTGACCCTTCGCGCTCCCTGCCTCTTCGC GGCCGCCCTCACCTAACCCGTCACGTCAATCCCCTTGCTCTCTCTCCCAC GGGGGCGCCAACTCTAAAAAAAGCGGCGAAGGGCTGGGTGAAGGAGGTTT CGCAGTCTGCGGAATCATCGGCAGGGTCAGAAGCGCGTCGGCCGTCGACA ACCAGGGGCTCCGCGGGATCCAAGCCCAGAAATAGCAGCGCTACGACCAC CCCGTCCCAGTCCGCGTCCAGGCGCGCGTACGCGGTGCTGGAGGCGGCGC AGCTGGCGGCCGCCCGGCAGATCATCAAGGGGGCGGACGTGGTGGTCTGC AGCTGCATCGGCGCCGGCAATGACGCCTTCGTCCGCGCGATCGGAGGCGA CCAAGAAGGGTAAGCAATACTATTCAAGTCATAGGGAGCGCGGCATTCTA TTTTCGTAGGAAGAATTTAATCCAAGACGAAGACTGGAAGAAAATAACTT GTTCGTTCGGGAACTCGGTGATTTTGGGTGCGCACAAGATTTTTTTTGGG GGGGGGGTTCGTCCCGCTCCCACCTCCTCACTGGTCTGGACCTATGCGTT GTATATTTTTCGTGCTTGGGACAACTCCCTTGTGTGTTGCCCGTCCTCCT TGACAAGCCGAGTTTGTTTGACCTTCTCCTGTTTTTCTGCGTTCTGTTGT TGTTGGAAGAGCTGCAGTGCATTTGTGTTGGTCTTGTTCCACCAACCTTC AGGGGGTTTAGCTCCATCTGCCGTGCGTGCTCTGTGCGTTCCCTGTTTTT TATTTTTAGCATTAACCGCGCTAAGCAACCGGCAGACCAATTAAAAGACG TCAAGTTGAAAACACAAAATTCCTATACCGTGATTTATGTGTGTGCCTGC GTGGGTGTTGTTGCCACCAACCAATCTGCAGGGGCTTCAGCTCTATCCGC TTCTCCACGGTAGTGATCGACGAGGCCACCCAGGCTACGGAGGCGGCGGC CCTCGTGCCCATCATTCGCGGATGCCAGCAGCTCGTCCTCGTCGGAGACC AGAACCAGGTCTGTATATGCCACGCCATGTCCATAGAGTCGTCGAGTGTC TCCTTCATCCCGATACCATGTACTGGGAAATAATTTAGAACGAGATACTG GAAGAATCACACGAAATTCGTAACAGGCTTTGCAGCGCGTCTAGAAGCGG TAGCAATGCAGCGCATGTCTCTACACGTGTCAGAACTTCAGCTGCGCTGG TTCGTCTCGAGTGCTGCTGCTGGTGTTTTGTATCTCGGTCGGAGACGGTT TGTTGGAGGACAAGTCTGTTCGTTTCTTGTTCGAGTGATGTAGTCGAGAG TGACCGCGTCACAGGCGGACTTGGGTCTGCGTTTGTCGCATTGTGAGTTA CGACGAAGATTGTCGAGAAGGAGCTTTTTGTCCAAAGTGTGGTGCTGGAG AGTTGCGGGCGGGTCTTGCGCCCGCGCGTGTCGCGTTGTGTACTTTGCAG GTGAAGAATCGTGAAAGGCCCGATCCGCGGGCCTTGACTGTGCTAGCCCC CCTCGTACACGAATGATGATGAGGAGGTTCGACAACTATTTGGTAGTGTT TCGCGTTCACCCTCCCCCCCGTGTTCCGTCCTGTCGAGGACGCGTGGGCA GTGGTCGATAACCGCAAAGCCATGCAAAACATGAAAGTACGCCCTCCCCG CCCCCTATGTTTTTCTCCGTTGCGACCCCGCTTTACCGGTGATGATCGAC AGCTCCCGCCCACGGTGATATGCCCCGAGGCAGAAGACGGCGGCCTTGGG ACTAGCCTCTTCTCGAGGCTGATGCACGCCGGGATCAAGCCCATCCTCCT CAACAGGTACGTATTTTTCAGTAAACACGCGAGCCCCCCCCCTCCCCCCT TTCCTGCAGCGCCTCGATCTCCCTTTTGGTTCTCCGGAAAGAGCGTTGGC CGAAATCGGGTACGTACACACCCGGTTCGAACATGGCTAAGATCGGGTAT CCATCCCATTGTGGCACGCCGCTGCTGGCAGCGACCGAATGACGCCATCG GATTGGCCGACGCTCGCCCCTTGCTACCAGCTGCGTGTTATGTTACACGG AAGGGCATACCCGATTTGTCCATGTGCGGGCCGGGTCTGATTCACGCACG AGACGCAAGACACATATCTCATTGGGCTTCCTCCATGCTGGTGTTGTTGT TGTCTTCAAATAAAAAACCTTTCCGTTTCTCTCTGTCCAGTATCTTCTTA TGTCCGTGCTAGTCCAACACCTGACGGGGTCGATTCCCGCGATTGTAGAC GTACTTCCCCAAAAAATATGCGCGACAAAAACACAACGATGGCCCCCCCT CCTTGCAACAGGCAATACCGAATGCACCCGGCAATCTCGGACTTTCCGTC TCTCCACTTCTACGACGGACAAGTCACGACGGGGATACGCGCGTCAGACA GACCCACTCCGGCCGGGTTCCCTTGGCCTGCCGCGTCTGGCCCCGTGGCC TTCGTGCGCGTCAGCGAGAGCGGGGGTGAGAGAGAGAAGCGTTAGTTTCT GCTCGATGTCTCTCGGCCTTTGTCTGTGGGCTACGGCACGCACTACCAAC CTGTAGCTCCATTCTTGCGCAGAAGAAGAAAGGCGCCCCCTTTCATGTTT TTTTTTTTTTCGAAAGCACGACAAATCCATCTCTTCTACAGATTAAGAGG CAGGGATAGATACGACTGCATTGGTGAGCAGATTTGTAAATTTTCTTTTT TTGGTTCGCTGACGATCGTTGGGCCCTTCGAGTTTCAAACCCATTAAAAG TGTGAGCTGCTGAGCTTGAGAAGCGTCGCAACCAACTGACAGCTGCGTGC TGGTCCTGCTGCCTGTTTTGTTGTCATCTTGCGTCATCCCTTGTTGGCAC TACGCCTCATGAGCCCAATCTGGAGAAATCACTTGTAAGCGAAGTTTTTT GTGTTGCTCTCTTTCCCTGCCGGTGACAACCCACACCGCTGCAGGGGAGG CTAACGCCAGTGTGGGCGGCGCTAGGAGAGGCCAGCTGGAGAGCCGCGGG GGCACCGAGGCGGCCGTGCAGGGGGGCAGCTTCGCTTCCGCGGCCCTGGG TACATCATACTGTAACGTGAGGGAGGCCGAGGCGGTCGCCTTCGCGCTGG AGCTCCTTCTCCGGGAGGGCGATGTTGAGGTGCGGTTCAGCTCTAAAGGA TGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8115:14..7066-

>mRNA_Ecto-sp13_S_contig8115.19459.1 ID=mRNA_Ecto-sp13_S_contig8115.19459.1|Name=mRNA_Ecto-sp13_S_contig8115.19459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1407bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8115:14..7066- (Ectocarpus species13 EcNAP12_S_4_19m)
GACCGCATTGAGCAGGTGAAGAGGGCGGGAGGCGTGCAGCCAGGGGTCGG
GGACACGGCGCTTCCGCAAGGGGTGGTGGCCCCAGACGCGGAGTGGGCGA
GGATAGCGCTGGGGCTCAGCCGTTTCCCGGGACCCGAGTGCTCGAGGGGG
GACATCGCCAACATTGTCGCGGGAGTCACTGCCGAGGCTGGCCTCAGCAA
GGTCCAGACAAAAGCTATCCGGCAGGCGCTGGGGAGTCGTCTGACGCTGA
TCCAGGGTCCTCCTGGGACGGGGAAGACGAAGACGGCGTGCAACCTTCTA
CTGTCGGCGGTCAGACTCCGCCAGAGCAAGGGGGGCGCTCGATGGGACGG
GAAGGTGATGGCGACCGCGTTCAGCAACGTCGCGGCCGACAACCTGTTGG
AGGGCGCCCTCGAGCTAGGACTGCGCGCTCTCAGGATCGGGCGACCCGCC
ACGATCCGCCCTACCCTGTGGCACGCCACGCTCGACGCTCTCGTGGAGAA
CCACCCGGATGTTATCGCGGCGAAGGGCTGGGTGAAGGAGGTTTCGCAGT
CTGCGGAATCATCGGCAGGGTCAGAAGCGCGTCGGCCGTCGACAACCAGG
GGCTCCGCGGGATCCAAGCCCAGAAATAGCAGCGCTACGACCACCCCGTC
CCAGTCCGCGTCCAGGCGCGCGTACGCGGTGCTGGAGGCGGCGCAGCTGG
CGGCCGCCCGGCAGATCATCAAGGGGGCGGACGTGGTGGTCTGCAGCTGC
ATCGGCGCCGGCAATGACGCCTTCGTCCGCGCGATCGGAGGCGACCAAGA
AGGGGGCTTCAGCTCTATCCGCTTCTCCACGGTAGTGATCGACGAGGCCA
CCCAGGCTACGGAGGCGGCGGCCCTCGTGCCCATCATTCGCGGATGCCAG
CAGCTCGTCCTCGTCGGAGACCAGAACCAGCTCCCGCCCACGGTGATATG
CCCCGAGGCAGAAGACGGCGGCCTTGGGACTAGCCTCTTCTCGAGGCTGA
TGCACGCCGGGATCAAGCCCATCCTCCTCAACAGGCAATACCGAATGCAC
CCGGCAATCTCGGACTTTCCGTCTCTCCACTTCTACGACGGACAAGTCAC
GACGGGGATACGCGCGTCAGACAGACCCACTCCGGCCGGGTTCCCTTGGC
CTGCCGCGTCTGGCCCCGTGGCCTTCGTGCGCGTCAGCGAGAGCGGGGGG
GAGGCTAACGCCAGTGTGGGCGGCGCTAGGAGAGGCCAGCTGGAGAGCCG
CGGGGGCACCGAGGCGGCCGTGCAGGGGGGCAGCTTCGCTTCCGCGGCCC
TGGGTACATCATACTGTAACGTGAGGGAGGCCGAGGCGGTCGCCTTCGCG
CTGGAGCTCCTTCTCCGGGAGGGCGATGTTGAGGTGCGGTTCAGCTCTAA
AGGATGA
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