mRNA_Ecto-sp13_S_contig8115.19459.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: D7FK70_ECTSI (tRNA-splicing endonuclease positive effector n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK70_ECTSI) HSP 1 Score: 797 bits (2058), Expect = 1.760e-283 Identity = 428/461 (92.84%), Postives = 437/461 (94.79%), Query Frame = 1
Query: 1 DRIEQVKRAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRGDIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGEANASVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVE 1383
DRIEQ++RAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRG+IAN+VAGVTAEAGLSKVQT+AIRQAL SRLTLIQGPPGTGKTKTACNL+LSAVRLRQSKGGAR DGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDV+AAKGWVKEVSQS ESSA SEARRPSTTRG XXXXXXXX LEAAQL AARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGE++A VGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVE
Sbjct: 187 DRIEQMERAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRGNIANVVAGVTAEAGLSKVQTRAIRQALESRLTLIQGPPGTGKTKTACNLILSAVRLRQSKGGARRDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVVAAKGWVKEVSQSTESSAASEARRPSTTRGSAGSKXXXXXXXXTPSQSASRRAYAVLEAAQLEAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGESHAGVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVE 647
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A6H5L473_9PHAE (AAA_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L473_9PHAE) HSP 1 Score: 702 bits (1812), Expect = 5.160e-249 Identity = 396/494 (80.16%), Postives = 404/494 (81.78%), Query Frame = 1
Query: 1 DRIEQVKRAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRGDIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQ---------------------LPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGE-----ANASVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVEVRFSSKG 1404
DRIEQVK+AGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFP PECSRGDIANIVAGVTAEAGLSK T+AIRQALGSRLTLIQGPPGTGKTKTACNL+LSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDV+AAKGWVKEVSQSAESSA SEARRPST+RG LEAAQL AARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQ LPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNR PAGFPWPAASGPVAFVRVSESGGE +NA VGGA+RGQLESRGGTEAAVQGGSFASAALGTSYCN+REAEAVAFALELLLREGDVEVRFSSKG
Sbjct: 174 DRIEQVKKAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPRPECSRGDIANIVAGVTAEAGLSK--TRAIRQALGSRLTLIQGPPGTGKTKTACNLILSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVVAAKGWVKEVSQSAESSAESEARRPSTSRGSAGSKPRNSSATTPSQSASRRAYAV-LEAAQLEAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQNSTRPPLFPPLRPRFIGDGPQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRLI------------------------------PAGFPWPAASGPVAFVRVSESGGEREKRESNAGVGGAKRGQLESRGGTEAAVQGGSFASAALGTSYCNLREAEAVAFALELLLREGDVEVRFSSKG 634
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: W7TMD0_9STRA (Regulator of nonsense n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMD0_9STRA) HSP 1 Score: 261 bits (667), Expect = 3.370e-74 Identity = 172/390 (44.10%), Postives = 219/390 (56.15%), Query Frame = 1
Query: 79 APDAEWARIALGLSRFPGPECSRGDIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRA------IGG--------DQEGGFSS------IRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGI-RASDRPTPAGFPWPAASGPVAFVRV 1185
A + W +A S P +R IV+ A L++ Q +A+R AL +L+LIQGPPGTGKT+TAC+L+ AV+L Q + GKV+A AFSNVAADNLLEG L LGL A+R+GR AT+RP L + TLDAL+ H V K + E+ GS AR + LE A+L AA I+ ADVVV +C+GA N+ + A +GG ++ FSS ++F TV+IDEA+QATE A LVP+ +GC+QLVLVGD QLPPT+ A GLG SLF+RL AGI+P LL QYRMHP I+ FPS FY G + + A RP P GFPWP + PVAFV V
Sbjct: 478 ATKSSWEALA---SAVPKTSFARKAADQIVSQEVARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDA----GKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVTTFK-------KKLEAVRGSTARDVQAAK-------------------------RDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGXXXXXXXWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAV 828
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A0U9HIU8_KLENI (RNA helicase nonsense mRNA reducing factor n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HIU8_KLENI) HSP 1 Score: 246 bits (629), Expect = 1.540e-69 Identity = 159/396 (40.15%), Postives = 214/396 (54.04%), Query Frame = 1
Query: 13 QVKRAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECS--RGDIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVI-AAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSE 1191
QV + GG G+T P+ + A WA G E +G + +A + G++K Q KAI A+ RLTL QGPPGTGKT+T + LL + RL AR ++A A SN+A DNLLEG LELGL+ +RIG+P ++ TL HATL+AL+ +HP + AA + V+ SAE+ + RG E A+ A ++++ ADV+V +CIGAG+ F VIDEATQAT+ ++LVP++ G +VLVGDQ QLPPTVI EA GL SLF L +G+K LL+ QYRMHPA++ FPS HFYDG++T+ DRP P F WP AS P+AF+ S+
Sbjct: 345 QVLQTGGAVDSAGET--PEKMAAKAPPWAS---------GKELGSLKGGVRKQLAKLEERGGVNKSQAKAIEAAMTRRLTLWQGPPGTGKTRTLLHFLLLSTRLL-----AREHKPILACADSNIAVDNLLEGLLELGLKVVRIGQPVKVKATLRHATLEALIADHPQMARAASLRGQSVTASAEARGSRSWSKERQQRGDAAMKAWRAS-----------------EDAEAIAIKEVLDDADVIVATCIGAGDPVL------------EGRTFRVCVIDEATQATQPSSLVPLVGGADNVVLVGDQKQLPPTVISLEAAKAGLEVSLFEELQRSGVKTFLLDTQYRMHPALAAFPSQHFYDGRLTSFPTPEDRPAPKRFAWPDASRPIAFLDCSD 695
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A075FWN5_9EURY (Regulator of nonsense transcripts 1 (UPF1, RENT1) n=8 Tax=root TaxID=1 RepID=A0A075FWN5_9EURY) HSP 1 Score: 237 bits (605), Expect = 1.180e-67 Identity = 147/332 (44.28%), Postives = 191/332 (57.53%), Query Frame = 1
Query: 193 LSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWD-GKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRV 1185
L++VQ +A R A+ SRLTLIQGPPGTGKT TA +L + A+ D G V+A A SNVA DNLLEG L LG+RA+R+G+P +R L AT+DA +E HP W++ S +RR RG + + I+ A V+ C+CIG+G++ RFS V+IDEATQATE AALVP++RG +Q+VLVGD QLPPTVI A++GGLG SLF R++ GI+P LL QYRMHPAIS+FP+ FY+G++ GI ASDR TPAG WP P+AF+ +
Sbjct: 200 LNEVQREAARAAMDSRLTLIQGPPGTGKTYTAVRIL---------ENWAKQDIGTVLAVADSNVAVDNLLEGLLSLGVRAVRLGQPVKVRENLREATMDARMEEHPLRRDLDHWLE--------SNEKLSRRVKGMRGKEKGLAHRDLSRGWKE----------VRKIESQMRDDILDRAQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPAALVPLVRGARQVVLVGDHRQLPPTVISQRAQNGGLGRSLFERMVEIGIEPHLLRVQYRMHPAISEFPNERFYEGRLEDGIAASDRQTPAGLLWPDWECPMAFLPI 492
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A2V3I143_9EURY (Helicase ATP-binding domain-containing protein n=8 Tax=root TaxID=1 RepID=A0A2V3I143_9EURY) HSP 1 Score: 236 bits (602), Expect = 3.210e-67 Identity = 146/352 (41.48%), Postives = 194/352 (55.11%), Query Frame = 1
Query: 193 LSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWD-GKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGEANASVGGARRGQLE 1245
L+K Q +A AL RLTLIQGPPGTGKT T +L + A+ D G ++A A SNVA DNLLEG L LG+RA+R+G+P +R +L AT+DA +E HP W++ + G + + T + + I+ + V+ C+CIG+G++ RFS V+IDEATQATE AALVP++RG +Q+VL+GD QLPPTVI AE+GGL SLF RL+ GI+P+LL QYRMHPAIS FP+ HFYD + G+ + DRPTPAG WP P+AF+ V+ GGE A G ++ E
Sbjct: 200 LNKAQREAALAALERRLTLIQGPPGTGKTHTGVRIL---------EAWAKQDPGTILAVADSNVAVDNLLEGLLSLGIRAVRLGQPVKVRESLREATMDARMEEHPLRRDLDHWLESNEKLGRRVKGMKGKEKGLT------------------YRELSRGWKEVRRIESQMRDDILNRSQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPAALVPLVRGARQIVLIGDHRQLPPTVISQRAENGGLNRSLFERLVEMGIEPLLLRTQYRMHPAISAFPNGHFYDDLLEDGVTSEDRPTPAGLLWPDWDMPIAFLPVT--GGEVKAPDGASKENPTE 510
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A2E0PQ68_9EURY (AAA domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E0PQ68_9EURY) HSP 1 Score: 232 bits (592), Expect = 9.200e-66 Identity = 139/333 (41.74%), Postives = 192/333 (57.66%), Query Frame = 1
Query: 190 GLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWD-GKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRV 1185
G+++ Q A + AL RLTLI GPPGTGKT TA +L S A+ D G V+A A SNVA DNLLEG L+ G+RA+R+G+P +R L AT+DA +E+H + V+E+ ++ + S + R +G + + +I+ A V+ C+CIG+G++ RFS V+IDEATQATE A LVP++RG +Q+V+VGD QLPPTV+ AE+GGL SLF RL+ G+ ILL+ QYRMHP+IS+FP+ HFYDG++ GI AS+RPTP+G WP PV F+ +
Sbjct: 199 GMNEAQRLATQSALSCRLTLIHGPPGTGKTHTAVRILES---------WAKQDLGSVLAVADSNVAVDNLLEGLLDRGVRAVRLGQPVKVRENLRQATIDARMESHE---LNRDLVEEIERNEKLSRKIKGMRGGKEKGLAHRDLSRGWKE--------------VRRIERQIRDEILDRAQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPATLVPLVRGARQVVMVGDHKQLPPTVVSRRAENGGLTRSLFERLVDMGVSTILLDTQYRMHPSISEFPNSHFYDGELMDGIEASERPTPSGLLWPDWDIPVCFIPI 493
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A520UNT6_9ARCH (AAA domain-containing protein (Fragment) n=1 Tax=Candidatus Poseidoniales archaeon TaxID=2163009 RepID=A0A520UNT6_9ARCH) HSP 1 Score: 232 bits (591), Expect = 9.990e-66 Identity = 141/338 (41.72%), Postives = 188/338 (55.62%), Query Frame = 1
Query: 175 VTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWD-GKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRV 1185
V+ + L++ Q +A + A+ SRLTLIQGPPGTGKT TA +L + A+ D G V+A A SNVA DNLLEG L LG+RA+R+G+P +R +L AT+DA +E HP W++ + + G + + + + I+ A V+ C+CIG+G++ RFS V+IDEATQATE AALVP++RG +Q+VLVGD QLPPTVI A GGLG SLF R++ GI P LL QYRMHPAIS FP+ HFY+G++ G+ SDR PAG WP P+AF+ V
Sbjct: 283 VSLASDLNEAQREAAKAAVDSRLTLIQGPPGTGKTHTAVRIL---------EAWAKQDIGTVLAVADSNVAVDNLLEGLLSLGVRAVRLGQPVKVRESLREATMDARMEEHPLRRDLDHWLESNEKLSRRVKGMKGKEKGLAH------------------RDLSRGWKEVRKIESQMRDDILDRAQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPAALVPLVRGARQIVLVGDHRQLPPTVISRRAGSGGLGRSLFERMVEIGISPHLLRIQYRMHPAISAFPNEHFYEGKLEDGVEVSDRVAPAGLLWPDWECPIAFLPV 581
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A0G4FCG3_VITBC (SAP domain-containing protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FCG3_VITBC) HSP 1 Score: 239 bits (611), Expect = 1.050e-65 Identity = 152/367 (41.42%), Postives = 205/367 (55.86%), Query Frame = 1
Query: 205 QTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDG---------------------KVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQ-------------SAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQ-EGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGG 1200
Q +A+R++L R+TLIQGPPGTGKT+T+C LL S V L ++ AR G KV+A AFSNVAADNLLEG +++G++A+R GR + P L + T+DA+V+ HP+ AA +E Q S E A S+A+ R ++ A+ A I+ ADVVV S I AG + + ++FSTV+IDEA+Q TE AA VP+++GC+QL+LVGDQNQLP TV+ +A+ GL SLFSRL+ AG+ P++L QYRMHPAI+ FPS FYD ++ + + +RPTP GFPWP PVAFV V E G
Sbjct: 653 QEEAVRRSLTQRVTLIQGPPGTGKTRTSCLLLGSIVALMKA---ARAQGIQPCGDLPAALSATGPPPRIEKVLAAAFSNVAADNLLEGLIKMGVKAVRSGRALVVNPALKNYTVDAMVDQHPEYRAALAHEREARQRRQQLYRAHQDDTSDEDKAASQAKLDEANR-------------------LLRLAEEDVKVAEQRAIYDIVTKADVVVTSAISAGQPGLTSTTQVPEWDTQRVPVKFSTVLIDEASQVTEPAASVPMVKGCEQLILVGDQNQLPATVVSDKAKAEGLNLSLFSRLVLAGVVPVMLAAQYRMHPAIAMFPSFEFYDDRLISIPKPEERPTPGGFPWPDDVKPVAFVSVMEPAG 997
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A0G4HN17_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HN17_9ALVE) HSP 1 Score: 239 bits (611), Expect = 1.140e-65 Identity = 170/441 (38.55%), Postives = 228/441 (51.70%), Query Frame = 1
Query: 193 LSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLL------LSAVRLRQSKGGARWDG------------------------KVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAES----SAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLE-------AAQLAAARQIIKGADVVVCSCIGAGNDAFVRAI---GGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGEANASVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVE 1383
L Q A+R AL RLTLIQGPPGTGKT+T+C +L + RLR + R++ K++A AFSNVAADN+LEG L++G++A+R+GR + P L++ T DALV HP+V AA ++EVS A + + P +G + A+ A +I+ ADVVV SC+GAG FV A+ G D E S I FSTV++DEA+Q TE AALVP++ G +Q++LVGDQNQLPPTV ++ L SLF RL+ AG+KP +L RQYRMHP I+ FPS FY G++ + +A DRP P G WP + PV V++ LESR A +GG TSY N REA + L LL EG+++
Sbjct: 1488 LDPSQDVAVRAALSRRLTLIQGPPGTGKTRTSCLILGTLAQMMRTARLRGHEPVNRFEKLFTIESKEKEQALRSIPPQPPKLEKILAAAFSNVAADNILEGLLKMGVKAVRVGRSNVVNPLLYNYTADALVRQHPEVKAAVRHLREVSDRARELRLFGMKPDEKGPLLPQGVARNETEELLTFKEKEFARKKKMQEHVRLAEEDVRVAEKRALWRIMASADVVVSSCMGAGKVDFVNALECPGWDPER--SPISFSTVLLDEASQVTEPAALVPLVTGAEQVILVGDQNQLPPTVTTESVKEKCLDVSLFVRLVLAGVKPFMLGRQYRMHPVIAAFPSAQFYGGKLESVPKAEDRPAPRGVLWPDRNAPVMMAAVTDE------------TLHLESR----ADWKGGGDT-----TSYQNKREATVILQLLRSLLAEGEIK 1905 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8115.19459.1 >prot_Ecto-sp13_S_contig8115.19459.1 ID=prot_Ecto-sp13_S_contig8115.19459.1|Name=mRNA_Ecto-sp13_S_contig8115.19459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=469bp DRIEQVKRAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRGback to top mRNA from alignment at Ecto-sp13_S_contig8115:14..7066- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8115.19459.1 ID=mRNA_Ecto-sp13_S_contig8115.19459.1|Name=mRNA_Ecto-sp13_S_contig8115.19459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7053bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8115:14..7066- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8115:14..7066- >mRNA_Ecto-sp13_S_contig8115.19459.1 ID=mRNA_Ecto-sp13_S_contig8115.19459.1|Name=mRNA_Ecto-sp13_S_contig8115.19459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1407bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8115:14..7066- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |