mRNA_Ecto-sp13_S_contig8103.19448.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8103.19448.1 vs. uniprot
Match: A0A6H5JFW1_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFW1_9PHAE) HSP 1 Score: 196 bits (498), Expect = 3.080e-58 Identity = 91/102 (89.22%), Postives = 98/102 (96.08%), Query Frame = 1
Query: 1 AGLLSGSSFFYDKHLKLIESLEATQEGTIAGYTAEVSEDIFHEALRVICTPSVQGTSYEATSTIDPIFWVIHPTIERLWQLRRLQNDAFDDTWVPFESACFG 306
AGLLSGSSFFYDKHL+LIE+LEATQE T+AGYTA+ SEDIFHEALRV+CTPSV+GTSYEATSTIDPIFWVIHPTIERLWQLRRLQ+DAFDDTWVP ES CFG
Sbjct: 342 AGLLSGSSFFYDKHLELIENLEATQEDTLAGYTAQESEDIFHEALRVMCTPSVEGTSYEATSTIDPIFWVIHPTIERLWQLRRLQDDAFDDTWVPSESVCFG 443
BLAST of mRNA_Ecto-sp13_S_contig8103.19448.1 vs. uniprot
Match: D7FSM9_ECTSI (Tyrosinase-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSM9_ECTSI) HSP 1 Score: 190 bits (483), Expect = 7.930e-55 Identity = 91/103 (88.35%), Postives = 96/103 (93.20%), Query Frame = 1
Query: 1 AGLLSGSSFFYDKHLKLIESLEA-TQEGTIAGYTAEVSEDIFHEALRVICTPSVQGTSYEATSTIDPIFWVIHPTIERLWQLRRLQNDAFDDTWVPFESACFG 306
AGLLSGSSFFYDKHLKLIE+L+A TQEGT+AGYTAE SEDIFHEALRV+CTPSV GT YEATSTIDPIFWVIHPTIERLWQLRRLQ+D FDDTWVP ES CFG
Sbjct: 485 AGLLSGSSFFYDKHLKLIENLDAATQEGTLAGYTAEESEDIFHEALRVMCTPSVVGTFYEATSTIDPIFWVIHPTIERLWQLRRLQDDTFDDTWVPSESVCFG 587
BLAST of mRNA_Ecto-sp13_S_contig8103.19448.1 vs. uniprot
Match: A0A6H5KKI9_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI9_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 9.980e-22 Identity = 54/110 (49.09%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 1 AGLLSGSSFFYDKHLKLIESL---EATQEGTIAGYTAEVSEDIFHEALRVICTPSVQGTSYEATSTIDPIFWVIHPTIERLWQLRRLQ----ND-AFDDTWVPFESACFG 306
AG+L+ FFYDK+ LI+ L + + GYT E + I+ E LR +C P GT Y ATST DP FW+IHPT +RLW LRRLQ ND AFD+TW+P + C+G
Sbjct: 587 AGVLA-DGFFYDKNGVLIKDLVDNDGNAFDILPGYTKEETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLQVKAENDTAFDETWIP-DHFCYG 694
BLAST of mRNA_Ecto-sp13_S_contig8103.19448.1 vs. uniprot
Match: D7G1K2_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K2_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 5.430e-20 Identity = 50/110 (45.45%), Postives = 65/110 (59.09%), Query Frame = 1
Query: 1 AGLLSGSSFFYDKHLKLIESL---EATQEGTIAGYTAEVSEDIFHEALRVICTPSVQGTSYEATSTIDPIFWVIHPTIERLWQLRRLQ-----NDAFDDTWVPFESACFG 306
AG+L+ FFYDK LIE L + + GYT + I+ E LR +C P GT Y ATST DP FW+IHPT +RLW LRRL+ + FD+TW+P + C+G
Sbjct: 394 AGVLA-EGFFYDKDGVLIEDLVDSDGNAFDILPGYTKGETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSKDDTVFDETWIP-DHFCYG 501
BLAST of mRNA_Ecto-sp13_S_contig8103.19448.1 vs. uniprot
Match: D7FSN5_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN5_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 5.550e-20 Identity = 49/110 (44.55%), Postives = 72/110 (65.45%), Query Frame = 1
Query: 1 AGLLSGSS--FFYDKHLKLIESLEATQ---EGTIAGYTAEVSEDIFHEALRVICTPSVQGTSYEATSTIDPIFWVIHPTIERLWQLRRLQN---DAFDDTWVPFESACFG 306
+G+LS ++ FFYD+ LKL+++L Q I GYTA+ ++ IF E LR++ TP G+ YE TST D FWV+HPT++RLW L RL++ + FD+TW + C+G
Sbjct: 397 SGVLSDAAGAFFYDEDLKLVDNLTDEQGHAHDRIPGYTADETKGIFTEMLRLLSTPMRIGSHYEGTSTNDVTFWVLHPTMDRLWHLNRLEDVNGEGFDETWRD-DHFCYG 505
BLAST of mRNA_Ecto-sp13_S_contig8103.19448.1 vs. uniprot
Match: D7FNR4_ECTSI (Tyrosinase-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR4_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 1.620e-15 Identity = 38/99 (38.38%), Postives = 62/99 (62.63%), Query Frame = 1
Query: 1 AGLLSGSSFFYDKHLKLIESLEATQEG---TIAGYTAEVSEDIFHEALRVICTPSVQGTSYEATSTIDPIFWVIHPTIERLWQLRRLQNDAFDDTWVPF 288
+G+L S+ YD +LI S + T+ GY+ E S I+ + + ++C+P GT ++ATST D FWV+HP+++RLW L+RL ++ F++TW F
Sbjct: 490 SGVLDSVSY-YDSTGELISSFKDENGDVLYTLPGYSEEESTQIYQQLMYLLCSPGHIGTMFQATSTNDITFWVLHPSVDRLWHLKRLGSEEFNETWDSF 587
BLAST of mRNA_Ecto-sp13_S_contig8103.19448.1 vs. uniprot
Match: A0A6H5K6J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6J0_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 8.780e-15 Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 85 IAGYTAEVSEDIFHEALRVICTPSVQGTSYEATSTIDPIFWVIHPTIERLWQLRRLQND-AFDDTWVPFESACFG 306
I GY+AE S I+ +C P+ G+ +EATST D FWV+HPT +RLW L RL+ D F++TW+ +S C G
Sbjct: 59 IPGYSAEESTAIYQGLKDALCIPTKVGSHFEATSTNDVTFWVLHPTFDRLWHLSRLEQDPVFNETWIS-DSTCVG 132
BLAST of mRNA_Ecto-sp13_S_contig8103.19448.1 vs. uniprot
Match: A0A6H5JTC5_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC5_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 3.670e-14 Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = 1
Query: 4 GLLSGSSFFYDKHLKLIESLEATQEG----TIAGYTAEVSEDIFHEALRVICTPSVQGTSYEATSTIDPIFWVIHPTIERLWQLRRL-QNDAFDDTWVPFESACFG 306
G + + +FYD +L+ L A +G I Y+AE S I+ +C P+ G+ +EATST D FWV+HPT +RLW L L QN F++TW+ +S C G
Sbjct: 571 GDVIATGYFYDADYQLVLEL-ADSDGHYYEEIPSYSAEESTAIYEGLKDALCIPTKVGSHFEATSTNDVTFWVLHPTFDRLWHLSLLEQNPGFNETWIS-DSTCVG 674
BLAST of mRNA_Ecto-sp13_S_contig8103.19448.1 vs. uniprot
Match: D8LAY9_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY9_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 2.350e-13 Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 85 IAGYTAEVSEDIFHEALRVICTPSVQGTSYEATSTIDPIFWVIHPTIERLWQLRRL-QNDAFDDTWVPFESACFG 306
I Y+AE S I+ +C P+ G+ +EATST D FWV+HPT +RLW L RL QN F++TW+ +S C G
Sbjct: 502 IPNYSAEESTAIYEGLKDALCIPTKVGSHFEATSTNDVTFWVLHPTFDRLWHLSRLEQNPVFNETWIS-DSTCVG 575
BLAST of mRNA_Ecto-sp13_S_contig8103.19448.1 vs. uniprot
Match: A0A7S0SRE9_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRE9_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.060e-13 Identity = 39/104 (37.50%), Postives = 55/104 (52.88%), Query Frame = 1
Query: 19 SSFFYDKHLKLIESLEATQEGTI----AGYTAEVSEDIFHEALRVICTPSVQGTSYEATSTIDPIFWVIHPTIERLWQLRRLQNDA----FDDTWVPFESACFG 306
S F+DK+ I S + ++ GYT + S IF + ++C+P G ++ATST D FWV+HPT++RLW RL + FDDTW E C G
Sbjct: 310 SLVFFDKNGNEITSWQNKTSKSLYDVLPGYTIDESNAIFQRIMDILCSPGHIGDMFQATSTNDVTFWVLHPTLDRLWHRLRLNANNGVIDFDDTWPDSEQTCNG 413 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8103.19448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8103.19448.1 >prot_Ecto-sp13_S_contig8103.19448.1 ID=prot_Ecto-sp13_S_contig8103.19448.1|Name=mRNA_Ecto-sp13_S_contig8103.19448.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=102bp AGLLSGSSFFYDKHLKLIESLEATQEGTIAGYTAEVSEDIFHEALRVICTback to top mRNA from alignment at Ecto-sp13_S_contig8103:4148..5298- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8103.19448.1 ID=mRNA_Ecto-sp13_S_contig8103.19448.1|Name=mRNA_Ecto-sp13_S_contig8103.19448.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1151bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8103:4148..5298- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8103:4148..5298- >mRNA_Ecto-sp13_S_contig8103.19448.1 ID=mRNA_Ecto-sp13_S_contig8103.19448.1|Name=mRNA_Ecto-sp13_S_contig8103.19448.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=306bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8103:4148..5298- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |