prot_Ecto-sp13_S_contig809.19430.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig809.19430.1
Unique Nameprot_Ecto-sp13_S_contig809.19430.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length125
Homology
BLAST of mRNA_Ecto-sp13_S_contig809.19430.1 vs. uniprot
Match: A0A6H5KYQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ6_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 5.110e-41
Identity = 70/123 (56.91%), Postives = 96/123 (78.05%), Query Frame = 0
Query:    2 PCNICTVTRKDLGNGQFNFAKNMRTLDGIDYSLSLIRKEPSASKRAKISKDTGVVGADTRNPIRENICINVIKSAGVDIFHQDAMNSFKRAFKAVLDGLNPEGQAVVSALAKDPALRIEGSEP 124
            PCN+C VT+ +LG+GQ++ A N R +DGID+SLSL+RKE + +K+  +S   GVVGA  RNP+RE++ +N +KS GVDI HQD +NSF RA KA++DGL+P G+  ++AL KDP+LRI GSEP
Sbjct:  428 PCNVCNVTQDELGDGQYDIAGNARMMDGIDHSLSLVRKEATKTKQGIVSTREGVVGAFVRNPVREHLHLNPVKSIGVDIMHQDPLNSFGRAMKAMVDGLSPAGRTWLAALVKDPSLRISGSEP 550          
BLAST of mRNA_Ecto-sp13_S_contig809.19430.1 vs. uniprot
Match: D8LJH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH2_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 3.810e-27
Identity = 48/125 (38.40%), Postives = 85/125 (68.00%), Query Frame = 0
Query:    1 MPCNICTVTRKDLGNGQFNFAKNMRTLDGIDYSLSLIRKEPSASKRAKISKDTGVVGADTRNPIRENICINVIKSAGVDIFHQDAMNSFKRAFKAVLDGLNP-EGQAVVSALAKDPALRIEGSEP 124
            MPC++C + ++DL +G ++  +N RT D  +Y+L +I   P+ ++R  +S   GV   +  NP R+++ +N++++ G+D+FHQDA NS ++ FK +L GL+  +G  ++S LAKDP+LR+ G+ P
Sbjct:  211 MPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPP 335          
BLAST of mRNA_Ecto-sp13_S_contig809.19430.1 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 4.510e-21
Identity = 44/121 (36.36%), Postives = 76/121 (62.81%), Query Frame = 0
Query:    5 ICTVTRKDLGNGQFNFAKNMRTLDGIDYSLSLIRKEPSASKRAKISKDTGVVGADTRNPIRENICINVIKSAGVDIFHQDAMNSFKRAFKAVLDGLNP-EGQAVVSALAKDPALRIEGSEP 124
            I     +DL +G ++  +N RT D  +Y+L +I    + ++R  +S   GV   +  NP R+++ +N++++ G+D+FHQDA NS  + FK +L GL+  +G  ++S LAKDP+LR+ G+ P
Sbjct:  507 IADKVEEDLADGNYDIVRNRRTDDQTEYALKVISTATTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDVFHQDAQNSLLKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPP 627          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig809.19430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KYQ6_9PHAE5.110e-4156.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJH2_ECTSI3.810e-2738.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWW6_ECTSI4.510e-2136.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig809contigEcto-sp13_S_contig809:11908..12848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig809.19430.1mRNA_Ecto-sp13_S_contig809.19430.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig809 11199..13679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig809.19430.1 ID=prot_Ecto-sp13_S_contig809.19430.1|Name=mRNA_Ecto-sp13_S_contig809.19430.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp
MPCNICTVTRKDLGNGQFNFAKNMRTLDGIDYSLSLIRKEPSASKRAKIS
KDTGVVGADTRNPIRENICINVIKSAGVDIFHQDAMNSFKRAFKAVLDGL
NPEGQAVVSALAKDPALRIEGSEP*
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