prot_Ecto-sp13_S_contig809.19429.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig809.19429.1
Unique Nameprot_Ecto-sp13_S_contig809.19429.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length249
Homology
BLAST of mRNA_Ecto-sp13_S_contig809.19429.1 vs. uniprot
Match: A0A6H5JF97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF97_9PHAE)

HSP 1 Score: 400 bits (1028), Expect = 1.680e-130
Identity = 227/244 (93.03%), Postives = 228/244 (93.44%), Query Frame = 0
Query:    1 MPVATTPLGGLRRGFLHGRIAASSALMSIESLRVGPDGGXXXXXXXXXXXXXXXXXXXXXLPHRLAAVTWXXXXXRLMARVNPFLTTEAXXXXXXXXVEEERQPLVWEVVTDDGGERVDLTRITTRCDVIPLAQEAGAGSSARRLYTCVGFIRPGRSKGIFRKVWAPAGKPRLLAWRFAGLDNLFFDRRAKGVFANTSQLPVFSVPLVIFTDAFNFFQRIGNAFSVNATHFSIGSTTRSHRRRL 244
            MPVATTPLGGLRRGFLHGRIAASSALMSIESLRVGPDGGXXXXXXXXXXXXXXXXXXXX LPHRLAAVTW     RL+ARVNPFLTTEA        VEEER PLVWEVVTDDGGERVDLTRITTRCDVIPLAQEAGAGSSARRLYTC GFIRPGRSKGIFRKVWAPAGKPRLLAWRFAGLDNLFFDRRAKGVFANTSQLPVFSVPLVIFTDAFNFFQRIGNAFSVNATHFSIGSTTRSHRRRL
Sbjct:  164 MPVATTPLGGLRRGFLHGRIAASSALMSIESLRVGPDGGXXXXXXXXXXXXXXXXXXXXQLPHRLAAVTWDEEEERLVARVNPFLTTEAALLNNPPAVEEERLPLVWEVVTDDGGERVDLTRITTRCDVIPLAQEAGAGSSARRLYTCAGFIRPGRSKGIFRKVWAPAGKPRLLAWRFAGLDNLFFDRRAKGVFANTSQLPVFSVPLVIFTDAFNFFQRIGNAFSVNATHFSIGSTTRSHRRRL 407          
BLAST of mRNA_Ecto-sp13_S_contig809.19429.1 vs. uniprot
Match: A0A6H5KYQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ6_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 1.180e-66
Identity = 128/245 (52.24%), Postives = 164/245 (66.94%), Query Frame = 0
Query:    3 VATTPLGGLRRGFLHGRIAASSALMSIESLRVGPDGGXXXXXXXXXXXXXXXXXXXXXL-PHRLAAVTWXXXXXRLMARVNPFLTTEAXXXXXXXXVEEERQPLVWEVVTDDGGERVDLTRITTRCDVIPLAQEAGAGSSAR-RLYTCVGFIRP-GRSKGIFRKVWAPAGKPRLLAWRFAGLDNLFFDRRAKGVFANTSQLPVFSVPLVIFTDAFNFFQRIGNAFSVNATHFSIGSTTRSHRRRL 244
            VAT P GGLRRGFLHG++AA+SALM +ESL VGP G                        P+RLA V W     RL++RV+PFLT+            +    +VWEVV  DGGE +D++RI  RCDV+P  Q AGAGSS+  R+++  GFIR  G+ K  ++KVW+P+G+P++L WRF GL  LFFD+RA  V+ N + LPVFS+PLVIFTDAFNFFQR G+ +S+NATHF+IGSTTR+ RRRL
Sbjct:  136 VATKPAGGLRRGFLHGKVAAASALMGVESLLVGPSGRQEKIFVGDTVLVASADERPEEARPYRLAEVVWVEDLSRLVSRVSPFLTSAEARITGAGAPPD----VVWEVVDGDGGEEIDISRIEGRCDVVPHVQGAGAGSSSSGRVFSAAGFIRRCGKEK--YKKVWSPSGQPKVLPWRFEGLYGLFFDKRAARVYFNKAGLPVFSIPLVIFTDAFNFFQRGGSPYSINATHFTIGSTTRAFRRRL 374          
BLAST of mRNA_Ecto-sp13_S_contig809.19429.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 4.540e-8
Identity = 34/69 (49.28%), Postives = 41/69 (59.42%), Query Frame = 0
Query:  176 WRFAGLDNLFFDRRAKGVFANTSQLPVFSVPLVIFTDAFNFFQRIGNAFSVNATHFSIGSTTRSHRRRL 244
            WR  G    FFDRRA GV AN + LPVFS  L   +DAFN+F   G  +SVNAT   +G  + +  RRL
Sbjct:    4 WRQQGYHGWFFDRRASGVHANLTGLPVFSTGLACSSDAFNYFSLSGKRYSVNATFVGLGCLSPALLRRL 72          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig809.19429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JF97_9PHAE1.680e-13093.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYQ6_9PHAE1.180e-6652.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZI4_ECTSI4.540e-849.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig809contigEcto-sp13_S_contig809:10368..11114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig809.19429.1mRNA_Ecto-sp13_S_contig809.19429.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig809 10270..11159 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig809.19429.1 ID=prot_Ecto-sp13_S_contig809.19429.1|Name=mRNA_Ecto-sp13_S_contig809.19429.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=249bp
MPVATTPLGGLRRGFLHGRIAASSALMSIESLRVGPDGGGGSVVVGDTVM
VLSSDGGSEQLPHRLAAVTWDEEEERLMARVNPFLTTEAALLNNPPAVEE
ERQPLVWEVVTDDGGERVDLTRITTRCDVIPLAQEAGAGSSARRLYTCVG
FIRPGRSKGIFRKVWAPAGKPRLLAWRFAGLDNLFFDRRAKGVFANTSQL
PVFSVPLVIFTDAFNFFQRIGNAFSVNATHFSIGSTTRSHRRRLHHGT*
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