prot_Ecto-sp13_S_contig80669.19406.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig80669.19406.1
Unique Nameprot_Ecto-sp13_S_contig80669.19406.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length59
Homology
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BLAST of mRNA_Ecto-sp13_S_contig80669.19406.1 vs. uniprot
Match: D8LDA3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDA3_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 2.550e-27
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0 
Query:    1 RAQALWDEGCGRRPYDIVTGVQLPFPTGKAERPPGRLAHPSQQSLERGRNLQASLIAA 58
            RAQALWDEGCGRR Y+IVTGVQLP P+ KAERPPGRLAHPSQQSLERGRNLQASLIAA
Sbjct:  400 RAQALWDEGCGRRSYNIVTGVQLPLPSVKAERPPGRLAHPSQQSLERGRNLQASLIAA 457
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BLAST of mRNA_Ecto-sp13_S_contig80669.19406.1 vs. uniprot
Match: A0A835YYF5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF5_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.040e-7
Identity = 35/62 (56.45%), Postives = 38/62 (61.29%), Query Frame = 0 
Query:    1 RAQALWDEGCGRRPYDIVTGVQLPFPTGKAERPPGR----LAHPSQQSLERGRNLQASLIAA 58
            RAQAL D   G + YDIVT   LP   G A   P R    LAHPSQ SLERGRN Q +L+AA
Sbjct:  199 RAQALADAAHGGKTYDIVTNAALP--PGLAPSVPERVCRWLAHPSQASLERGRNRQGALVAA 258
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80669.19406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDA3_ECTSI2.550e-2791.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YYF5_9STRA1.040e-756.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig80669contigEcto-sp13_S_contig80669:344..520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig80669.19406.1mRNA_Ecto-sp13_S_contig80669.19406.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig80669 344..520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig80669.19406.1 ID=prot_Ecto-sp13_S_contig80669.19406.1|Name=mRNA_Ecto-sp13_S_contig80669.19406.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
RAQALWDEGCGRRPYDIVTGVQLPFPTGKAERPPGRLAHPSQQSLERGRN
LQASLIAA*
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