prot_Ecto-sp13_S_contig12312.1940.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12312.1940.1 vs. uniprot
Match: A0A6H5L1B5_9PHAE (Cytoplasmic dynein 2 light intermediate chain 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1B5_9PHAE) HSP 1 Score: 478 bits (1230), Expect = 2.230e-168 Identity = 236/250 (94.40%), Postives = 247/250 (98.80%), Query Frame = 0
Query: 1 MGEDIWSLVSRQLHATSSASPRKQQAEEVKDDGETEAPGEGGDPADSADKITAVCAFASYALCVGMPGAGKSTLLNTYLNPNNDSIPKPTVALEYMFARRASAPNMPKDVAHIWELGGGSHVSDLVRVPITPDRFHDALYVIVVDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVAHINGASLLFCS 250
MGEDIWSL+SRQL+ATSSA+ R+QQ EEVKDDGETEAPGEGGDPADSADKITA+CAFASYALCVGMPGAGKSTLLNTYLNPNNDSIPKPTVALEYMFARRASAPNMPKDVAHIWELGGGSHVSDLVRVPITPDRFH+AL+VIV+DLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKR TYAKLGRDHPDLR+VRPCPVPLV+VGNKYDVFKNQESARKRILAQALRFVAH+NGASLLFCS
Sbjct: 1 MGEDIWSLISRQLYATSSANTRQQQVEEVKDDGETEAPGEGGDPADSADKITALCAFASYALCVGMPGAGKSTLLNTYLNPNNDSIPKPTVALEYMFARRASAPNMPKDVAHIWELGGGSHVSDLVRVPITPDRFHNALFVIVLDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKRTTYAKLGRDHPDLRSVRPCPVPLVMVGNKYDVFKNQESARKRILAQALRFVAHVNGASLLFCS 250
BLAST of mRNA_Ecto-sp13_S_contig12312.1940.1 vs. uniprot
Match: D7FSG7_ECTSI (Cytoplasmic dynein 2 light intermediate chain 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSG7_ECTSI) HSP 1 Score: 476 bits (1226), Expect = 2.960e-166 Identity = 238/250 (95.20%), Postives = 244/250 (97.60%), Query Frame = 0
Query: 1 MGEDIWSLVSRQLHATSSASPRKQQAEEVKDDGETEAPGEGGDPADSADKITAVCAFASYALCVGMPGAGKSTLLNTYLNPNNDSIPKPTVALEYMFARRASAPNMPKDVAHIWELGGGSHVSDLVRVPITPDRFHDALYVIVVDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVAHINGASLLFCS 250
MGEDIWSLVSRQL+ATSS + R+QQA+EVKDDGE E PGEGGDPADSA KITAVCAFASYALCVGMPGAGKSTLLNTYLNP+NDSIPKPTVALEYMFARRASA NMPKDVAHIWELGGGSHVSDLVRVPITPDRFHDALY+IVVDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVAHINGASLLFCS
Sbjct: 1 MGEDIWSLVSRQLYATSSVNTRQQQADEVKDDGEAEVPGEGGDPADSAGKITAVCAFASYALCVGMPGAGKSTLLNTYLNPHNDSIPKPTVALEYMFARRASAANMPKDVAHIWELGGGSHVSDLVRVPITPDRFHDALYIIVVDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVAHINGASLLFCS 250
BLAST of mRNA_Ecto-sp13_S_contig12312.1940.1 vs. uniprot
Match: A0A835YX97_9STRA (Cytoplasmic dynein 2 light intermediate chain 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX97_9STRA) HSP 1 Score: 290 bits (742), Expect = 4.380e-93 Identity = 144/253 (56.92%), Postives = 186/253 (73.52%), Query Frame = 0
Query: 2 GEDIWSLVSRQLHA---TSSASPRKQQAEEVKDDGETEAPGEGGDPADSADKITAVCAFASYALCVGMPGAGKSTLLNTYLNPNNDSI-PKPTVALEYMFARRASAPNMPKDVAHIWELGGGSHVSDLVRVPITPDRFHDALYVIVVDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVAHINGASLLFCS 250
G D+WS ++RQ++ T +++ R+ A + DDG T A PA + C SY LCVGMPG+GKS+LL+ YL P + + PKPT+ALEY+FARRA+A N PKD+AHIWELGGG+H SDLV VPI F A Y++VVDLSRPS ++ H+ WTD+IKA VK VREL K DPTFA+ LKR+TYAK GR+HPDL+ V+PCPVPL+ V NKYDVF++ +SAR+R++ QALRF+AH+NGA+LL CS
Sbjct: 16 GNDVWSRLTRQVYGESGTDASAARQAAASDPADDGGTAA------PATTVSANAGSC-VESYTLCVGMPGSGKSSLLSAYLTPTKEDLNPKPTIALEYLFARRATASNSPKDIAHIWELGGGAHTSDLVAVPIGAHNFSTACYIVVVDLSRPSDIVAHITHWTDRIKASVKGAVRELAKADPTFADGLKRRTYAKFGREHPDLKIVKPCPVPLIFVANKYDVFRDSDSARRRLVGQALRFLAHVNGATLLCCS 261
BLAST of mRNA_Ecto-sp13_S_contig12312.1940.1 vs. uniprot
Match: A0A7S2FGJ4_9STRA (Cytoplasmic dynein 2 light intermediate chain 1 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FGJ4_9STRA) HSP 1 Score: 209 bits (532), Expect = 9.050e-63 Identity = 100/189 (52.91%), Postives = 133/189 (70.37%), Query Frame = 0
Query: 59 SYALCVGMPGAGKSTLLNTYLNPNNDSIPKPTVALEYMFARRASAPNMPKDVAHIWELGGGSHVSDLVRVPITPDRFHDALYVIVVDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVAHINGASLL 247
+Y L VG AGKS+L+ + NP D PKPTVALEY+FARR++APN PKDVAHIWELGGGS + +LV VPITP + I+VDLS+P+++IP L +W D I+A V CV L + +P A L+ ++ DH D R VRP +PL+I+ NKYD++K+ ES +K+ ++QALRFVAH NGA+LL
Sbjct: 7 TYTLFVGQRQAGKSSLITAFHNPTKDDTPKPTVALEYLFARRSAAPNQPKDVAHIWELGGGSKLRNLVSVPITPQNITSNVVAIIVDLSQPANLIPDLCEWIDIIRARVDECVATLKQTNPEAASALEESASLRIPADHADARVVRPMTIPLLIIANKYDIYKDMESVQKKTISQALRFVAHSNGATLL 195
BLAST of mRNA_Ecto-sp13_S_contig12312.1940.1 vs. uniprot
Match: A0A7S2F733_9STRA (Cytoplasmic dynein 2 light intermediate chain 1 n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F733_9STRA) HSP 1 Score: 193 bits (490), Expect = 3.480e-56 Identity = 94/200 (47.00%), Postives = 133/200 (66.50%), Query Frame = 0
Query: 48 ADKITAVCAFASYALCVGMPGAGKSTLLNTYLNPNNDSIPKPTVALEYMFARRASAPNMPKDVAHIWELGGGSHVSDLVRVPITPDRFHDALYVIVVDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVAHINGASLL 247
A K + ++ L VG +GKS+L+ + NP+ D PKPT ALEY+FAR++++PN PKDVAHIWELGGGS + LV VPITP+ + + VIVVDLS+P ++P L++W IK V C+ EL K D A L K ++ DHPD +V+P +P++I+ NKYD FK+ ES +K+ ++ ALRF AH++ A+LL
Sbjct: 2 ASKSAQIPRMETFTLFVGQKESGKSSLITAFHNPSKDESPKPTTALEYLFARKSTSPNQPKDVAHIWELGGGSKLRKLVSVPITPESLPNVVAVIVVDLSKPIDLVPALVEWIGIIKERVSECLIELQKTDEGAARALGEKAKGRMAADHPDSSSVKPFAIPVIIIANKYDKFKSFESIQKKAISLALRFFAHLHSATLL 201
BLAST of mRNA_Ecto-sp13_S_contig12312.1940.1 vs. uniprot
Match: A0A401SRJ5_CHIPU (Cytoplasmic dynein 2 light intermediate chain 1 n=6 Tax=Orectolobiformes TaxID=30503 RepID=A0A401SRJ5_CHIPU) HSP 1 Score: 172 bits (436), Expect = 9.240e-49 Identity = 84/183 (45.90%), Postives = 122/183 (66.67%), Query Frame = 0
Query: 68 GAGKSTLLNTYLNPNNDSIPKPTVALEYMFARRASAPNMPKDVAHIWELGGGSHVSDLVRVPITPDRFHDALYVIVVDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVAHINGASLLFCS 250
G GK+T++ +L+ D IPKPT+ALEY F RRA N PKD+AH WELGGG+ +SDL ++PIT D V+V+DLS+P+ + + + + K + + ELGK+D K+KT+ L R+HPD + P P+PLVI+G+KYD+F++ ES +++++ + LRFVAH GASLLF S
Sbjct: 11 GLGKTTIILRFLD--RDEIPKPTLALEYTFGRRAKGHNTPKDIAHFWELGGGTSLSDLAQIPITIDSIRTISIVLVLDLSKPNDLWLSMEKLLNVTKNHINSTINELGKKDSINVNDFKQKTWKTLQRNHPDWELIDPFPIPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLLFFS 191
BLAST of mRNA_Ecto-sp13_S_contig12312.1940.1 vs. uniprot
Match: A0A401PMG5_SCYTO (Cytoplasmic dynein 2 light intermediate chain 1 n=6 Tax=Galeoidea TaxID=119195 RepID=A0A401PMG5_SCYTO) HSP 1 Score: 170 bits (431), Expect = 1.150e-47 Identity = 82/187 (43.85%), Postives = 123/187 (65.78%), Query Frame = 0
Query: 64 VGMPGAGKSTLLNTYLNPNNDSIPKPTVALEYMFARRASAPNMPKDVAHIWELGGGSHVSDLVRVPITPDRFHDALYVIVVDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVAHINGASLLFCS 250
VG GK+T++ +L+ D IPKPT+ALEY F RRA N PKD+AH WELGGG+ +SDL ++PIT D V+V+DLS+P+ + + + + + + ELG++D +K++T+ L R+HPD + P P+PLVI+G+KYD+F++ ES +++++ + LRFVAH GASLLF S
Sbjct: 39 VGNKSGGKTTIILRFLD--RDEIPKPTLALEYTFGRRAKGHNTPKDIAHFWELGGGTSLSDLAQIPITIDSIRTLSIVLVLDLSKPNDLWTSMEKLLIVTRNHINTAINELGRKDSINVNDIKQRTWKTLQRNHPDWELIDPFPIPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYCGASLLFFS 223
BLAST of mRNA_Ecto-sp13_S_contig12312.1940.1 vs. uniprot
Match: A0A6P8QYK3_GEOSA (Cytoplasmic dynein 2 light intermediate chain 1 n=5 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8QYK3_GEOSA) HSP 1 Score: 169 bits (429), Expect = 1.460e-47 Identity = 81/187 (43.32%), Postives = 122/187 (65.24%), Query Frame = 0
Query: 64 VGMPGAGKSTLLNTYLNPNNDSIPKPTVALEYMFARRASAPNMPKDVAHIWELGGGSHVSDLVRVPITPDRFHDALYVIVVDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVAHINGASLLFCS 250
+G GK+T++ L+ D PKPT+ALEY F RRA NMPKD+AH WELGGG+ + DL+R+PIT D V+V+DLS+P+ + P + ++ V + ELGK+ A +K+K + + +DHPD + P P+PLVIVG+KYD+F++ +S +++++ + LRF+AH GASL+F S
Sbjct: 41 IGNKNGGKTTIILRCLD--RDEPPKPTLALEYTFGRRAKGHNMPKDIAHFWELGGGTSLLDLIRIPITLDSMRSFSIVLVLDLSKPNDLWPTMENLLQVTRSHVNKLISELGKKHSRIANEIKQKMWKPMQKDHPDRELIDPFPIPLVIVGSKYDIFQDFDSEKRKVICKTLRFLAHYYGASLMFTS 225
BLAST of mRNA_Ecto-sp13_S_contig12312.1940.1 vs. uniprot
Match: A0A4W3GVJ0_CALMI (Cytoplasmic dynein 2 light intermediate chain 1 n=3 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GVJ0_CALMI) HSP 1 Score: 169 bits (428), Expect = 3.200e-47 Identity = 82/187 (43.85%), Postives = 121/187 (64.71%), Query Frame = 0
Query: 64 VGMPGAGKSTLLNTYLNPNNDSIPKPTVALEYMFARRASAPNMPKDVAHIWELGGGSHVSDLVRVPITPDRFHDALYVIVVDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVAHINGASLLFCS 250
+G GK+T++ +L+ D +PKPT+ALEY F RRA N PKD+AH WELGGG+ + DL+ +PI D D V+V+DLS+P+ + + + + + + ELGK+D A K++ + L +DHPD V P PVPLVI+GNKYD+F++ +S +++++ + LRFVAH GASLLF S
Sbjct: 38 LGNKSGGKTTIILRFLD--RDEVPKPTLALEYTFGRRAKGHNTPKDIAHFWELGGGTSLVDLIEIPINMDSIRDLSVVLVLDLSKPNDLWTSMEKLLTAARRHIDNVLNELGKKDSKTANQWKQRAWKTLQKDHPDWELVDPFPVPLVIIGNKYDIFQDFDSEQRKVICKTLRFVAHYYGASLLFFS 222
BLAST of mRNA_Ecto-sp13_S_contig12312.1940.1 vs. uniprot
Match: A0A8J6A3U1_GALPY (Cytoplasmic dynein 2 light intermediate chain 1 (Fragment) n=5 Tax=Boreoeutheria TaxID=1437010 RepID=A0A8J6A3U1_GALPY) HSP 1 Score: 168 bits (425), Expect = 4.360e-47 Identity = 78/187 (41.71%), Postives = 123/187 (65.78%), Query Frame = 0
Query: 64 VGMPGAGKSTLLNTYLNPNNDSIPKPTVALEYMFARRASAPNMPKDVAHIWELGGGSHVSDLVRVPITPDRFHDALYVIVVDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDPTFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVAHINGASLLFCS 250
+G GK+T++ L+ D PKPT+ALEY + RRA N+PKD+AH WELGGG+ + DL+ +PIT D V+V+DLS+P+ + P + K+ V + +LGK +P A +++K ++ + +DHPD + P P+PLVI+G+KYD+F++ +S +++++ + LRFVAH GASL+F S
Sbjct: 34 IGSKNGGKTTIILRCLD--RDEPPKPTLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLDLSKPNDLWPTMENLLQSTKSHVDKVIMKLGKTNPKAASEMRQKIWSNMQKDHPDRELIDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS 218 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12312.1940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig12312.1940.1 ID=prot_Ecto-sp13_S_contig12312.1940.1|Name=mRNA_Ecto-sp13_S_contig12312.1940.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=250bpback to top |