mRNA_Ecto-sp13_S_contig12308.1937.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12308.1937.1
Unique NamemRNA_Ecto-sp13_S_contig12308.1937.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: A0A6H5JCM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM3_9PHAE)

HSP 1 Score: 498 bits (1281), Expect = 9.220e-165
Identity = 338/397 (85.14%), Postives = 340/397 (85.64%), Query Frame = 1 
Query:   91 AKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPPAMPVSMLYRSERSQRKLEFAPAAPSEQXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDGASSSLSPDRLQQDVDRVDLSGSPTREGGRPSSSSPHRLDGXXXXXXXXXXXXVSPYLPTAKAAGPVAATASSGPSLPQQASPRKQAXXXXXXXXXXXXXXXXXXXXPLSSDGETNASAVKTTACGGGARTSQQSGSQPLSAGSQRGGRQATAVGGDGVAKATTVLSAQVQ 1281
            AKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGS+SVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPPAMPVSMLYR ERSQRKLEFAPAAPSEQXXXXXXXXXXXXXXXXXXXXXXXXX  E +GASSSLSP RLQQ VD VDLSG PTR GGRPSS  PH LDG  XXXXXXX   VSP LP AKAAGP  ATASSGPSLPQQASPR Q          XXXXXXXXXXX                     A TS QSGSQPLSAGSQR GRQATAVGGDG AKATTVLSAQVQ
Sbjct:  383 AKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSSSVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPPAMPVSMLYRRERSQRKLEFAPAAPSEQXXXXXXXXXXXXXXXXXXXXXXXXXS-EVNGASSSLSPSRLQQGVDCVDLSGCPTR-GGRPSS--PHGLDGGGXXXXXXX---VSPCLPAAKAAGPAPATASSGPSLPQQASPRTQPSHTSSIPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AGTSHQSGSQPLSAGSQREGRQATAVGGDGAAKATTVLSAQVQ 771
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BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: D8LK86_ECTSI (Harp (Smarcal1)-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK86_ECTSI)

HSP 1 Score: 476 bits (1225), Expect = 4.310e-154
Identity = 332/415 (80.00%), Postives = 334/415 (80.48%), Query Frame = 1 
Query:   85 SKAKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPP-----AMPVSMLYRSERSQRKLEFAPAAPSEQXXXXXXXXXXXXXXXXXXXXXXXXXXX-EGDGASSSLSPDRLQQDVDRVDLSGSPTREGGRPSSSS--PHRLDGXXXXXXXXXXXXVSPYLPTAKAAGPVAATASS-----GPSLPQQASPRKQ---AXXXXXXXXXXXXXXXXXXXXPLSSDGETNASAVKTTACGGGARTSQQSGSQPLSAGSQRGGRQATAVGGDGVAKATTVLSAQVQ 1281
            SKAKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDG+ISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPP     AMPVSMLYR ERSQRKLEFAPAA    XXXXXXXXXXXXXXXX            E   ASSSLS  RLQQ VD VDLSGSPTREGG PSSSS  PHRLDG  XXXXXXXXXX                         GPSLPQQ SP+ Q        XXXXXXXXXXXXXXX  LSS  ETNASAVKTTA GGGA TSQQSGSQPLSAGSQR GRQAT VG    AKATTVLSAQVQ
Sbjct:  783 SKAKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGVISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPPVGGTKAMPVSMLYRPERSQRKLEFAPAASXXXXXXXXXXXXXXXXXXXDPTTASWLPPSPEEKWASSSLSSGRLQQGVDCVDLSGSPTREGGIPSSSSSSPHRLDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPSLPQQTSPQTQPSPTSSIPXXXXXXXXXXXXXXXMQLSSGDETNASAVKTTAVGGGAGTSQQSGSQPLSAGSQREGRQATTVGXXXAAKATTVLSAQVQ 1197
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BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: A0A835Z711_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z711_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.280e-41
Identity = 83/137 (60.58%), Postives = 105/137 (76.64%), Query Frame = 1 
Query:  130 KEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVG-RGTMDDGMISTIHRKQTTLRSTVGLNRDAGGYSNV 537
            +EV+D +ER + + GV  VRIDG+T + KRQ +VDRFQ    V +ILLSITAAGVGITLTA S A FAELYWTPG MAQAEDRIHRIGQK++  LI++LV    TMD  ++S+I  KQ TL+ST G+++DA G++N 
Sbjct:   15 QEVLDGIERAIKDCGVEMVRIDGNTPKGKRQMLVDRFQTERRVRMILLSITAAGVGITLTAGSIAAFAELYWTPGVMAQAEDRIHRIGQKSQC-LIQFLVSDTPTMDQHLLSSISLKQKTLQSTTGISKDASGFANA 150
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BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: A0A7S0TEQ7_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TEQ7_HEMAN)

HSP 1 Score: 131 bits (329), Expect = 1.060e-32
Identity = 71/140 (50.71%), Postives = 93/140 (66.43%), Query Frame = 1 
Query:  106 KLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRDAGG 525
            K +VFAHH+EV+D LE  + +  V  +RIDG     +RQ +VD FQ    V V +L +TAAGVG+TLTA+S  VFAEL WTPG M QAEDR+HRIGQ+ + V + YL+G+GT+DD +   I RK     S +  N +A G
Sbjct:   32 KFLVFAHHREVLDGLEAAVRKAKVGLIRIDGGVDASQRQGLVDSFQKDEGVRVAVLGLTAAGVGLTLTASSTVVFAELNWTPGVMVQAEDRVHRIGQR-ECVNVHYLIGKGTLDDVIWPGIVRKLRVTSSFLDGNNEAVG 170
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BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: D3B4N2_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B4N2_POLPP)

HSP 1 Score: 139 bits (351), Expect = 6.740e-32
Identity = 74/136 (54.41%), Postives = 92/136 (67.65%), Query Frame = 1 
Query:   94 KEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTV 501
            KE +K +VFAHH +++D LER +   G   +RIDGST  + RQ  V RFQ S    V LLSITAAG G+TLTA+S  VF ELYWTPG + QAEDR+HRIGQ+ + V I YL+G+ T+DD M  TI  K   L  T+
Sbjct:  891 KENKKFLVFAHHTDILDGLERSIKSTGTGYMRIDGSTPAEARQTYVTRFQNSDKCRVALLSITAAGTGLTLTASSLVVFVELYWTPGVLRQAEDRVHRIGQR-EDVHIHYLIGKNTLDDKMWPTICNKLEVLGETL 1025
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BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: Q554U4_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q554U4_DICDI)

HSP 1 Score: 137 bits (344), Expect = 5.330e-31
Identity = 72/136 (52.94%), Postives = 91/136 (66.91%), Query Frame = 1 
Query:   94 KEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTV 501
            K+  K +VFAHH ++M+ LE  +   G   +RIDGST   +RQ  V +FQ +AS  V LLSITAAG G+TLTA++  VF ELYWTPG + QAEDRIHRIGQ  KT  I YL+G+ T+DD +  TI  K   L  T+
Sbjct: 1016 KKNEKFLVFAHHADIMNGLEEAIKSTGAGYIRIDGSTPAVQRQAFVTKFQNNASCKVALLSITAAGTGLTLTASNLVVFVELYWTPGVLRQAEDRIHRIGQ-TKTCYIHYLIGKNTLDDRIWPTICNKLEVLGETL 1150
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BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: A0A5J4NXQ0_9TREM (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NXQ0_9TREM)

HSP 1 Score: 131 bits (330), Expect = 1.290e-30
Identity = 73/138 (52.90%), Postives = 95/138 (68.84%), Query Frame = 1 
Query:  103 RKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRD 516
            RK ++FAHH EVMDAL   L E  V  +RIDG T  ++R  + ++FQ   +  V LLSITAAG GI+LTAA+  VFAEL+W PG++ QAEDR +RIGQ+  +VL+RYL+  GT DD + S I +K   L S  GLNR+
Sbjct:   93 RKFLLFAHHTEVMDALSNLLAEKSVDFIRIDGRTNSEQRSVVCEKFQQEENCLVALLSITAAGTGISLTAANLVVFAELFWNPGALVQAEDRAYRIGQR-DSVLVRYLLAEGTADDYIWSLIEKKLDVL-SKAGLNRE 228
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BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: UPI00064482E8 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064482E8)

HSP 1 Score: 135 bits (340), Expect = 1.480e-30
Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 1 
Query:   94 KEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTV 501
            KE +K ++FAHH EV+D LE+ +       +RIDGST    RQ  V RFQ S    V LLSITAAG G+TLTA+S  VF ELYWTPG + QAEDR+HRIGQK + V I YL+G+ T+DD +  TI  K   L  T+
Sbjct:  613 KEKKKFLIFAHHSEVLDGLEKAIQATDAGYMRIDGSTPPSNRQSHVLRFQNSDKCQVALLSITAAGTGLTLTASSLVVFVELYWTPGVLRQAEDRVHRIGQKDE-VNIHYLIGKNTLDDKIWPTICNKLEVLGETL 747
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BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: A0A1S3JIJ9_LINUN (DNA annealing helicase and endonuclease ZRANB3-like isoform X1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JIJ9_LINUN)

HSP 1 Score: 135 bits (339), Expect = 2.390e-30
Identity = 69/132 (52.27%), Postives = 97/132 (73.48%), Query Frame = 1 
Query:  106 KLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTV 501
            K +VFA+H+++++ L+  L ++ +  +RIDG+   K+R  +VD FQ  A+  V LLSITAAGVG+TLTAAS  VFAELYWTPG++ Q EDR HRIGQ+ + V + YLV +GTMD+ M S I+RK T + +T+
Sbjct:  350 KFLVFAYHQDMLNGLQETLHDLDIKFIRIDGNVPPKERGMLVDTFQKDANTRVALLSITAAGVGLTLTAASLVVFAELYWTPGTLEQCEDRAHRIGQQNR-VNVHYLVAKGTMDEWMWSMINRKTTVVTATL 480
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BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: A0A0R3X5M7_HYDTA (Uncharacterized protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3X5M7_HYDTA)

HSP 1 Score: 133 bits (335), Expect = 7.180e-30
Identity = 75/167 (44.91%), Postives = 107/167 (64.07%), Query Frame = 1 
Query:   94 KEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPP 594
            +E RK +++AHH+E++DA+ R ++   V  +RIDG T  ++R+ + DRFQ  +   V LLSITAA  G+ LTAA+  VFAEL+W PG + QAEDR HRIGQ+  +V I YL+  GT+DD + S +  K   L   VGLN+++  + NV     +LLS   T S + P
Sbjct:  851 EEDRKFILYAHHQEMLDAMSRSIESKQVEYIRIDGKTPPEQRRALCDRFQNESDCRVALLSITAASTGLNLTAANLVVFAELFWNPGVLVQAEDRAHRIGQQ-DSVNIHYLLASGTVDDQLWSLVKNKLDVL-GQVGLNQES--FDNVDLSRAKLLSKQPTASNMAP 1013
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCM3_9PHAE9.220e-16585.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK86_ECTSI4.310e-15480.00Harp (Smarcal1)-related n=1 Tax=Ectocarpus silicul... [more]
A0A835Z711_9STRA1.280e-4160.58P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S0TEQ7_HEMAN1.060e-3250.71Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
D3B4N2_POLPP6.740e-3254.41Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]
Q554U4_DICDI5.330e-3152.94Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]
A0A5J4NXQ0_9TREM1.290e-3052.90SWI/SNF-related matrix-associated actin-dependent ... [more]
UPI00064482E81.480e-3053.68hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A1S3JIJ9_LINUN2.390e-3052.27DNA annealing helicase and endonuclease ZRANB3-lik... [more]
A0A0R3X5M7_HYDTA7.180e-3044.91Uncharacterized protein n=1 Tax=Hydatigena taeniae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12308contigEcto-sp13_S_contig12308:65..5023 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score476.5
Seed ortholog evalue1.4e-131
Seed eggNOG ortholog2880.D8LK86
Model size1311
KEGG koko:K14440
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.annealing helicase activity
EggNOG OGsCOG0553@1,KOG1000@2759
EC3.6.4.12
Cds size1311
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12308.1937.1prot_Ecto-sp13_S_contig12308.1937.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12308 65..5023 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462655.4353359-CDS-Ecto-sp13_S_contig12308:64..1961681462655.4353359-CDS-Ecto-sp13_S_contig12308:64..196Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12308 65..196 +
1681462655.4463782-CDS-Ecto-sp13_S_contig12308:1034..11121681462655.4463782-CDS-Ecto-sp13_S_contig12308:1034..1112Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12308 1035..1112 +
1681462655.4557362-CDS-Ecto-sp13_S_contig12308:1600..17761681462655.4557362-CDS-Ecto-sp13_S_contig12308:1600..1776Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12308 1601..1776 +
1681462655.4651935-CDS-Ecto-sp13_S_contig12308:2532..26481681462655.4651935-CDS-Ecto-sp13_S_contig12308:2532..2648Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12308 2533..2648 +
1681462655.4752765-CDS-Ecto-sp13_S_contig12308:3212..33071681462655.4752765-CDS-Ecto-sp13_S_contig12308:3212..3307Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12308 3213..3307 +
1681462655.4848742-CDS-Ecto-sp13_S_contig12308:4309..50231681462655.4848742-CDS-Ecto-sp13_S_contig12308:4309..5023Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12308 4310..5023 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12308.1937.1

>prot_Ecto-sp13_S_contig12308.1937.1 ID=prot_Ecto-sp13_S_contig12308.1937.1|Name=mRNA_Ecto-sp13_S_contig12308.1937.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=437bp
GRGAWGGSGQAKGTCVAAAAAAAGTSSASKAKEPRKLVVFAHHKEVMDAL
ERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGI
TLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDD
GMISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPPA
MPVSMLYRSERSQRKLEFAPAAPSEQQRSATAAAAAVAARADSTTASWPP
PPPEGDGASSSLSPDRLQQDVDRVDLSGSPTREGGRPSSSSPHRLDGGGG
GGGGVGGGGVSPYLPTAKAAGPVAATASSGPSLPQQASPRKQASPTSSIP
PPSAVAAAAAAAMPLSSDGETNASAVKTTACGGGARTSQQSGSQPLSAGS
QRGGRQATAVGGDGVAKATTVLSAQVQVNSTVGLCT*
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mRNA from alignment at Ecto-sp13_S_contig12308:65..5023+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12308.1937.1 ID=mRNA_Ecto-sp13_S_contig12308.1937.1|Name=mRNA_Ecto-sp13_S_contig12308.1937.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4959bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12308:65..5023+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCCGTGGGGCCTGGGGGGGGTCGGGGCAGGCGAAGGGCACATGTGTAGC
TGCCGCCGCCGCCGCGGCCGGCACTTCCTCCGCTTCCAAGGCAAAAGAGC
CGCGAAAGCTCGTGGTGTTCGCTCACCATAAGGTTAGTGATTTTTTCGGC
GGATTGGAAACCTGTCGCTTTTTTTCCATCGTGGTCCTTCCTGGTTTTCA
ATTTTTGTCTTCAATTTAATGTAAAGCTCGATATTGTTCGGCGACTGGCA
CCATTTTCTTCGTGCAATTGATCCAAGTTCCCAGCCGTAACTTGCTGTAT
TGGAGGGGTTTGAGTCTTGAGTCTTGGTGGAGTGATCTATGCTACGGTAT
GCATAATTCCTAGTAGGTGGCATTGTACGCAGCACCGCGTCCCTCCACGT
GTCAACTTCTGGCGTTGGAGCTTGTCTTCAGAAGTTCTTCCAGTTCTTCA
TCTTCGGACACAGGCAGAAAAATCGTAATTTCTAAGCCCCAGCCCCCCCC
CACCACCGAAGGTTCATTTTGATACATTCCTCGATTTGGGTGCCGATTCA
ATGACGTCGAGGCGTGCGGGAATGGCCGGGTGCGAAACCCGACCGACTCG
TGCAAGGAGAACTCCTCGCCGATCATTTTCGGCATTTGACAGGCTCTTGC
TTGCGGAGCAATCACTCTCAATGATCGGCCCTGCACGATTTTTTACGGTG
TTCCGTATTCCCGTGTGCAAGGAAGTCTTTTTAGGGAGCTGTTACTGGTG
TCTACCGGGACGGGATGGTTTACACATTCCATGTGTTCTTCAGGTCATTT
CGCATGTTTTTTTGTGGTGTTTTTTTTCGTTTCTTTTAGGCACGCGTCCT
TCTGCACCGTCTACACCTGGCCCTCCCCGGTGAGTGTCCACTCACCCTCT
TGTTTGTCCACCGCCGTTTCCCGTCCTGTTGTGATGAACGACTCTTACTC
TCGAACCGCGTGTTTCGCAGGAAGTGATGGATGCCCTCGAGAGGGGTCTC
GACGAGATAGGGGTCTGTTCTGTGCGGATCGACGGCAGCACCGCTCAGGT
CAGGTCGGCATCGCTATCCTGTACTGCTTTACTGTTGTGCTGGTTGACGT
GGTCGCCACCCGACCCGCCCTCGCCCTCGCCACGGCGGTTGGGCGTTCGT
TGAAACGTGTCGTCGATCAGACCGGGAGGTCCCTTCCCTCATTGTACGCT
ACCTTTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGGGGTTGG
AGGAGGCGTTGGCGTTGTTGCGGTCGCCGGTGTCGGTGTTTCTAGCGTCG
GTTCTGCCCTTGTCCTCCCTACAATGTAACACGAATGGCCCGCGCGCTTC
CTCTCTCGCCGGCTTCCTCGAACCCCCTCCCCCACCCCGCCCCGCCCCGC
CCCGCCCCGCCCCGCAACACACGGACGACGCCGATCAACCCACGCACGCC
ATGCGTGCTCGGCGCCGAACGCCGGTCGACATGCCCACAACAATGACAAC
CACGACGACGACGACACAACAAAAATCACGAAGCAGAAGAAGCGCCAGCC
AATCGTCGACCGCTTCCAAGGCAGCGCCTCGGTGTCGGTGATCCTCCTCT
CCATAACGGCGGCGGGGGTGGGCATCACCCTCACGGCGGCGTCTTGCGCG
GTGTTCGCCGAGCTCTACTGGACGCCCGGGTCAATGGCTCAGGCGGAGGA
CCGGATCCACCGGTATGGAAAAGCTTTGTCTTCGCGATTGATGTTTTCAC
AAGCTTCTTTTTTTTTGTTCGTGCTCTGATTTGGCTGGATGTCCGCTGGT
GATTGTTTCTGTTCTTGTGTTTTTCTCTGTTCTGTCTGCGTGTGCTTTTT
TTAGTCTTTGCCATGCATGTGCTCTTAGTCTTTACCATGCGTGTGCTGTT
TTTTGCCTTTGTTTTGCGGGTGCTCGTATACTGTTCGGGTTGCGTTGTGC
CTTGCGTCGGTCCTTGTTATGTCGTGCCTTACGGTATCATGTTGTGGCAC
TCCTAGAAGTCAAGTGAGGTTTGCAGCCATATGGCCATATGTTATGTAGG
ACACGTTTTTTTAGGTGTGGTCTTGAGCGGAAAGAGTAGGAGGGGGAGGA
AGGAATTTTCATCTTTTAGGACGTTGCTGTTGTCGTGGTCATGGTCGTCG
TCGTCGATGGTGATTGTGGTGCCCATAATTGCGGGTCTTACTTTGGACGA
TCGATTGATGGACAGACAGGCCGCAGCTCGGTTGACGGTTCAAAGCGTCG
TCGCCACCAATGAGAGAATGGGAGCGGAGGGTCTGCTCTAGCGATGGAGT
TGTGGTACCATTCGTGACGACGTCACCGGCGAGAGAGCCGTTGTTTTCAT
GCGGAGGCTTAGACGTTGTTGTTGCCGGCGCAAAGTGTTTGTGTGTGTGT
TGCGCGTTGTTGCTCGACGCATGTCTCTGCAAATAACGACCTCCGACGAA
CTCCTGTGTTGGTGGCAGGATCGGGCAGAAGGCCAAGACCGTGCTGATAC
GATACCTCGTGGGTCGAGGCACGATGGACGACGGCATGATTAGCACGATA
CACCGCAAGCAGACAACGCTCAGGTCGACCGTTGGTGAGAGCTAAACGAT
CGAGGGAGACGGGGGGGGGAAGAGAGGTAGAGCCAGAGACGGGGACAGAC
CACGAAGAGAGAACAACGCCACACTGAGCAGCAATAACGCTAGCGAGAAC
CGAATGGATTTTTGGTGTTCGTGTCTCCACCACGATGACGCGTGACTGAC
TGCCCTCCTGGCGAAACAACAAACCCTTGCGCAAAAAAAGCGGTGGAGCT
ACTCACACCTAACCTCCCCACGTACGATTGTCTCTCTCGCACACCGTGTC
TCTCGCATGGTTGTCGGGTTTGCCCCTCCCCCCTCCCCCGAGACTTTTGA
GCCACCTTTGGCAAAGTAGGAAGGAACGATTAACCATCGGTGATCAGTCG
TCGTGAGGGAGCAATGCTCCGTCGTCTTGAGGGCGCGTGATGAATGGTAA
CAAAGGCATGAAAAATATGAGAGTACGCGCCACCCCCAAGTCGCAACGCC
CCGTGCGCCCTTTCGTGATCCACGGAGATGATTTGCTGTGCGTTTCGATT
TTCGTGTGATGAATACCATGTACCACGCGAAACCGGTAAAAACCGCAGGG
CTCAACCGGGACGCCGGGGGCTACAGCAACGTTCCGGGCAGGGAGCACCG
CCTCTTGAGTCCTGGGAACACCCCAAGCCCAGTCCCTCCCCCGGTGGGTG
GCACGAAGGGCGGACGGTGTTTGAGGTTGTCACCATCAACGTTTATTCTT
GTTTCACGGTATTAATAGCATAGCTTTGGAGTAGATGGATTTGCGCTTCA
CACCGCTGCACATTTGTTTTTTTTTCCCAGCTGGAAGAAAAAGTGGAACG
AGTGCTTCCGTTCGGAGGCAGTAAAGAAAAAAAAAATCATGCCACCCAGC
GAGTAATCTGGGGCTTGGGCATGGCCTGGCCGTACAGCACCGTGTGACAA
ATAATGCGAAATGTTCTGGGTGTCGGGTTTGGCCTGCCGCTTCTTTTTTT
TTTCGTCGCTTTAAAATTTGCGCGCGCAGCATTTCTGCCGGACACGAGAT
CCAATCCGCGGTCACACAGCCCCCAGTGCGCGGAAATCGACGGTTATTCA
AAAACGCAGGGGGAGAGGGACCTTGAAGCTCAGTGTTTTTATGGCTTGGA
AATCAAGTTTGAGCTCAAGTTCATTGGCCACAAACCGGCTATCTTTCGGC
GTGACTAACTGTGTATTATCGTGCGCGCCCCCTGCGCCCGCCACACGCAT
GCGACGTCTCGAGAATGAGACGTCTCGAGAATGTTGTTCGATCCTTCTCC
CGAGATAGGACAGCTTGTGGACACTGTCGTGTCTTTTTTCCCGGGCACCC
AATACCCAATACCCAAGGGCGCACGAAGAAGCATCTGTTAACATCTAGGT
ACCCCCGGAGGGCCTACAGGGGATGCTCTGAAACCAAAGTGAAAATGAAA
TTCAGCTAAAAGTGAAACACCGCTGATTTTTTATTTCATTTCGACCTCTC
TAGTGGCTGGGTGTCGCTCTCGCTTTTTTCTCTGTGCATCCTCGGAAAAC
CAGCCATTACGGCACCAAGCGTGCAACTGTCGCGGCGTGGTTCTGCCCTT
TTCTTGGGCTCACTCCGATGTTTCCCCGTGTCCTACCCGCTGCTGTTTCC
GTGGTGACTCTTTCCCCGCTATCTCATTACACTATTTACACCCAGGCGAT
GCCCGTGTCCATGCTGTACCGCTCCGAGCGGTCACAGCGCAAGCTCGAGT
TTGCACCAGCGGCACCGAGCGAGCAGCAGCGTTCAGCAACGGCGGCGGCG
GCGGCGGTGGCGGCAAGGGCTGATTCAACAACCGCTTCATGGCCACCACC
ACCGCCAGAAGGGGATGGGGCGTCGTCGTCGTTATCACCCGACAGACTGC
AGCAAGACGTGGATCGCGTGGATCTTAGCGGGTCTCCCACGAGAGAAGGA
GGCAGGCCTTCTTCTTCTTCTCCGCATCGTCTTGATGGCGGCGGCGGCGG
CGGCGGCGGTGTTGGAGGTGGCGGCGTGAGTCCCTATCTTCCCACTGCGA
AGGCCGCCGGCCCGGTCGCGGCTACCGCTTCTTCTGGTCCGTCACTTCCC
CAGCAAGCTTCACCACGAAAACAAGCGTCGCCTACGTCATCGATACCACC
ACCATCAGCAGTAGCAGCAGCAGCGGCGGCGGCAATGCCGTTGTCTTCCG
ACGGCGAGACCAATGCTTCCGCCGTAAAAACGACGGCTTGTGGTGGCGGT
GCGAGAACCTCCCAACAAAGCGGCAGCCAGCCTCTGTCGGCGGGATCCCA
GAGAGGAGGGAGGCAGGCGACGGCGGTGGGCGGCGACGGGGTAGCGAAGG
CGACGACTGTTCTCTCGGCTCAAGTTCAGGTAAACAGTACTGTTGGGCTT
TGCACTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12308:65..5023+

>mRNA_Ecto-sp13_S_contig12308.1937.1 ID=mRNA_Ecto-sp13_S_contig12308.1937.1|Name=mRNA_Ecto-sp13_S_contig12308.1937.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1311bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12308:65..5023+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCCGTGGGGCCTGGGGGGGGTCGGGGCAGGCGAAGGGCACATGTGTAGC
TGCCGCCGCCGCCGCGGCCGGCACTTCCTCCGCTTCCAAGGCAAAAGAGC
CGCGAAAGCTCGTGGTGTTCGCTCACCATAAGGAAGTGATGGATGCCCTC
GAGAGGGGTCTCGACGAGATAGGGGTCTGTTCTGTGCGGATCGACGGCAG
CACCGCTCAGAAGAAGCGCCAGCCAATCGTCGACCGCTTCCAAGGCAGCG
CCTCGGTGTCGGTGATCCTCCTCTCCATAACGGCGGCGGGGGTGGGCATC
ACCCTCACGGCGGCGTCTTGCGCGGTGTTCGCCGAGCTCTACTGGACGCC
CGGGTCAATGGCTCAGGCGGAGGACCGGATCCACCGGATCGGGCAGAAGG
CCAAGACCGTGCTGATACGATACCTCGTGGGTCGAGGCACGATGGACGAC
GGCATGATTAGCACGATACACCGCAAGCAGACAACGCTCAGGTCGACCGT
TGGGCTCAACCGGGACGCCGGGGGCTACAGCAACGTTCCGGGCAGGGAGC
ACCGCCTCTTGAGTCCTGGGAACACCCCAAGCCCAGTCCCTCCCCCGGCG
ATGCCCGTGTCCATGCTGTACCGCTCCGAGCGGTCACAGCGCAAGCTCGA
GTTTGCACCAGCGGCACCGAGCGAGCAGCAGCGTTCAGCAACGGCGGCGG
CGGCGGCGGTGGCGGCAAGGGCTGATTCAACAACCGCTTCATGGCCACCA
CCACCGCCAGAAGGGGATGGGGCGTCGTCGTCGTTATCACCCGACAGACT
GCAGCAAGACGTGGATCGCGTGGATCTTAGCGGGTCTCCCACGAGAGAAG
GAGGCAGGCCTTCTTCTTCTTCTCCGCATCGTCTTGATGGCGGCGGCGGC
GGCGGCGGCGGTGTTGGAGGTGGCGGCGTGAGTCCCTATCTTCCCACTGC
GAAGGCCGCCGGCCCGGTCGCGGCTACCGCTTCTTCTGGTCCGTCACTTC
CCCAGCAAGCTTCACCACGAAAACAAGCGTCGCCTACGTCATCGATACCA
CCACCATCAGCAGTAGCAGCAGCAGCGGCGGCGGCAATGCCGTTGTCTTC
CGACGGCGAGACCAATGCTTCCGCCGTAAAAACGACGGCTTGTGGTGGCG
GTGCGAGAACCTCCCAACAAAGCGGCAGCCAGCCTCTGTCGGCGGGATCC
CAGAGAGGAGGGAGGCAGGCGACGGCGGTGGGCGGCGACGGGGTAGCGAA
GGCGACGACTGTTCTCTCGGCTCAAGTTCAGGTAAACAGTACTGTTGGGC
TTTGCACTTGA
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