prot_Ecto-sp13_S_contig12308.1937.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12308.1937.1
Unique Nameprot_Ecto-sp13_S_contig12308.1937.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length437
Homology
BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: A0A6H5JCM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM3_9PHAE)

HSP 1 Score: 498 bits (1281), Expect = 9.220e-165
Identity = 338/397 (85.14%), Postives = 340/397 (85.64%), Query Frame = 0
Query:   31 AKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPPAMPVSMLYRSERSQRKLEFAPAAPSEQXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDGASSSLSPDRLQQDVDRVDLSGSPTREGGRPSSSSPHRLDGXXXXXXXXXXXXVSPYLPTAKAAGPVAATASSGPSLPQQASPRKQAXXXXXXXXXXXXXXXXXXXXPLSSDGETNASAVKTTACGGGARTSQQSGSQPLSAGSQRGGRQATAVGGDGVAKATTVLSAQVQ 427
            AKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGS+SVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPPAMPVSMLYR ERSQRKLEFAPAAPSEQXXXXXXXXXXXXXXXXXXXXXXXXX  E +GASSSLSP RLQQ VD VDLSG PTR GGRPSS  PH LDG  XXXXXXX   VSP LP AKAAGP  ATASSGPSLPQQASPR Q          XXXXXXXXXXX                     A TS QSGSQPLSAGSQR GRQATAVGGDG AKATTVLSAQVQ
Sbjct:  383 AKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSSSVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPPAMPVSMLYRRERSQRKLEFAPAAPSEQXXXXXXXXXXXXXXXXXXXXXXXXXS-EVNGASSSLSPSRLQQGVDCVDLSGCPTR-GGRPSS--PHGLDGGGXXXXXXX---VSPCLPAAKAAGPAPATASSGPSLPQQASPRTQPSHTSSIPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AGTSHQSGSQPLSAGSQREGRQATAVGGDGAAKATTVLSAQVQ 771          
BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: D8LK86_ECTSI (Harp (Smarcal1)-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK86_ECTSI)

HSP 1 Score: 476 bits (1225), Expect = 4.310e-154
Identity = 332/415 (80.00%), Postives = 334/415 (80.48%), Query Frame = 0
Query:   29 SKAKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPP-----AMPVSMLYRSERSQRKLEFAPAAPSEQXXXXXXXXXXXXXXXXXXXXXXXXXXX-EGDGASSSLSPDRLQQDVDRVDLSGSPTREGGRPSSSS--PHRLDGXXXXXXXXXXXXVSPYLPTAKAAGPVAATASS-----GPSLPQQASPRKQ---AXXXXXXXXXXXXXXXXXXXXPLSSDGETNASAVKTTACGGGARTSQQSGSQPLSAGSQRGGRQATAVGGDGVAKATTVLSAQVQ 427
            SKAKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDG+ISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPP     AMPVSMLYR ERSQRKLEFAPAA    XXXXXXXXXXXXXXXX            E   ASSSLS  RLQQ VD VDLSGSPTREGG PSSSS  PHRLDG  XXXXXXXXXX                         GPSLPQQ SP+ Q        XXXXXXXXXXXXXXX  LSS  ETNASAVKTTA GGGA TSQQSGSQPLSAGSQR GRQAT VG    AKATTVLSAQVQ
Sbjct:  783 SKAKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGVISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPPVGGTKAMPVSMLYRPERSQRKLEFAPAASXXXXXXXXXXXXXXXXXXXDPTTASWLPPSPEEKWASSSLSSGRLQQGVDCVDLSGSPTREGGIPSSSSSSPHRLDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPSLPQQTSPQTQPSPTSSIPXXXXXXXXXXXXXXXMQLSSGDETNASAVKTTAVGGGAGTSQQSGSQPLSAGSQREGRQATTVGXXXAAKATTVLSAQVQ 1197          
BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: A0A835Z711_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z711_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.280e-41
Identity = 83/137 (60.58%), Postives = 105/137 (76.64%), Query Frame = 0
Query:   44 KEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVG-RGTMDDGMISTIHRKQTTLRSTVGLNRDAGGYSNV 179
            +EV+D +ER + + GV  VRIDG+T + KRQ +VDRFQ    V +ILLSITAAGVGITLTA S A FAELYWTPG MAQAEDRIHRIGQK++  LI++LV    TMD  ++S+I  KQ TL+ST G+++DA G++N 
Sbjct:   15 QEVLDGIERAIKDCGVEMVRIDGNTPKGKRQMLVDRFQTERRVRMILLSITAAGVGITLTAGSIAAFAELYWTPGVMAQAEDRIHRIGQKSQC-LIQFLVSDTPTMDQHLLSSISLKQKTLQSTTGISKDASGFANA 150          
BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: A0A7S0TEQ7_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TEQ7_HEMAN)

HSP 1 Score: 131 bits (329), Expect = 1.060e-32
Identity = 71/140 (50.71%), Postives = 93/140 (66.43%), Query Frame = 0
Query:   36 KLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRDAGG 175
            K +VFAHH+EV+D LE  + +  V  +RIDG     +RQ +VD FQ    V V +L +TAAGVG+TLTA+S  VFAEL WTPG M QAEDR+HRIGQ+ + V + YL+G+GT+DD +   I RK     S +  N +A G
Sbjct:   32 KFLVFAHHREVLDGLEAAVRKAKVGLIRIDGGVDASQRQGLVDSFQKDEGVRVAVLGLTAAGVGLTLTASSTVVFAELNWTPGVMVQAEDRVHRIGQR-ECVNVHYLIGKGTLDDVIWPGIVRKLRVTSSFLDGNNEAVG 170          
BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: D3B4N2_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B4N2_POLPP)

HSP 1 Score: 139 bits (351), Expect = 6.740e-32
Identity = 74/136 (54.41%), Postives = 92/136 (67.65%), Query Frame = 0
Query:   32 KEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTV 167
            KE +K +VFAHH +++D LER +   G   +RIDGST  + RQ  V RFQ S    V LLSITAAG G+TLTA+S  VF ELYWTPG + QAEDR+HRIGQ+ + V I YL+G+ T+DD M  TI  K   L  T+
Sbjct:  891 KENKKFLVFAHHTDILDGLERSIKSTGTGYMRIDGSTPAEARQTYVTRFQNSDKCRVALLSITAAGTGLTLTASSLVVFVELYWTPGVLRQAEDRVHRIGQR-EDVHIHYLIGKNTLDDKMWPTICNKLEVLGETL 1025          
BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: Q554U4_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q554U4_DICDI)

HSP 1 Score: 137 bits (344), Expect = 5.330e-31
Identity = 72/136 (52.94%), Postives = 91/136 (66.91%), Query Frame = 0
Query:   32 KEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTV 167
            K+  K +VFAHH ++M+ LE  +   G   +RIDGST   +RQ  V +FQ +AS  V LLSITAAG G+TLTA++  VF ELYWTPG + QAEDRIHRIGQ  KT  I YL+G+ T+DD +  TI  K   L  T+
Sbjct: 1016 KKNEKFLVFAHHADIMNGLEEAIKSTGAGYIRIDGSTPAVQRQAFVTKFQNNASCKVALLSITAAGTGLTLTASNLVVFVELYWTPGVLRQAEDRIHRIGQ-TKTCYIHYLIGKNTLDDRIWPTICNKLEVLGETL 1150          
BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: A0A5J4NXQ0_9TREM (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NXQ0_9TREM)

HSP 1 Score: 131 bits (330), Expect = 1.290e-30
Identity = 73/138 (52.90%), Postives = 95/138 (68.84%), Query Frame = 0
Query:   35 RKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRD 172
            RK ++FAHH EVMDAL   L E  V  +RIDG T  ++R  + ++FQ   +  V LLSITAAG GI+LTAA+  VFAEL+W PG++ QAEDR +RIGQ+  +VL+RYL+  GT DD + S I +K   L S  GLNR+
Sbjct:   93 RKFLLFAHHTEVMDALSNLLAEKSVDFIRIDGRTNSEQRSVVCEKFQQEENCLVALLSITAAGTGISLTAANLVVFAELFWNPGALVQAEDRAYRIGQR-DSVLVRYLLAEGTADDYIWSLIEKKLDVL-SKAGLNRE 228          
BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: UPI00064482E8 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064482E8)

HSP 1 Score: 135 bits (340), Expect = 1.480e-30
Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 0
Query:   32 KEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTV 167
            KE +K ++FAHH EV+D LE+ +       +RIDGST    RQ  V RFQ S    V LLSITAAG G+TLTA+S  VF ELYWTPG + QAEDR+HRIGQK + V I YL+G+ T+DD +  TI  K   L  T+
Sbjct:  613 KEKKKFLIFAHHSEVLDGLEKAIQATDAGYMRIDGSTPPSNRQSHVLRFQNSDKCQVALLSITAAGTGLTLTASSLVVFVELYWTPGVLRQAEDRVHRIGQKDE-VNIHYLIGKNTLDDKIWPTICNKLEVLGETL 747          
BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: A0A1S3JIJ9_LINUN (DNA annealing helicase and endonuclease ZRANB3-like isoform X1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JIJ9_LINUN)

HSP 1 Score: 135 bits (339), Expect = 2.390e-30
Identity = 69/132 (52.27%), Postives = 97/132 (73.48%), Query Frame = 0
Query:   36 KLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTV 167
            K +VFA+H+++++ L+  L ++ +  +RIDG+   K+R  +VD FQ  A+  V LLSITAAGVG+TLTAAS  VFAELYWTPG++ Q EDR HRIGQ+ + V + YLV +GTMD+ M S I+RK T + +T+
Sbjct:  350 KFLVFAYHQDMLNGLQETLHDLDIKFIRIDGNVPPKERGMLVDTFQKDANTRVALLSITAAGVGLTLTAASLVVFAELYWTPGTLEQCEDRAHRIGQQNR-VNVHYLVAKGTMDEWMWSMINRKTTVVTATL 480          
BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Match: A0A0R3X5M7_HYDTA (Uncharacterized protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3X5M7_HYDTA)

HSP 1 Score: 133 bits (335), Expect = 7.180e-30
Identity = 75/167 (44.91%), Postives = 107/167 (64.07%), Query Frame = 0
Query:   32 KEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPP 198
            +E RK +++AHH+E++DA+ R ++   V  +RIDG T  ++R+ + DRFQ  +   V LLSITAA  G+ LTAA+  VFAEL+W PG + QAEDR HRIGQ+  +V I YL+  GT+DD + S +  K   L   VGLN+++  + NV     +LLS   T S + P
Sbjct:  851 EEDRKFILYAHHQEMLDAMSRSIESKQVEYIRIDGKTPPEQRRALCDRFQNESDCRVALLSITAASTGLNLTAANLVVFAELFWNPGVLVQAEDRAHRIGQQ-DSVNIHYLLASGTVDDQLWSLVKNKLDVL-GQVGLNQES--FDNVDLSRAKLLSKQPTASNMAP 1013          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12308.1937.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCM3_9PHAE9.220e-16585.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK86_ECTSI4.310e-15480.00Harp (Smarcal1)-related n=1 Tax=Ectocarpus silicul... [more]
A0A835Z711_9STRA1.280e-4160.58P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S0TEQ7_HEMAN1.060e-3250.71Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
D3B4N2_POLPP6.740e-3254.41Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]
Q554U4_DICDI5.330e-3152.94Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]
A0A5J4NXQ0_9TREM1.290e-3052.90SWI/SNF-related matrix-associated actin-dependent ... [more]
UPI00064482E81.480e-3053.68hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A1S3JIJ9_LINUN2.390e-3052.27DNA annealing helicase and endonuclease ZRANB3-lik... [more]
A0A0R3X5M7_HYDTA7.180e-3044.91Uncharacterized protein n=1 Tax=Hydatigena taeniae... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 48..131
e-value: 2.0E-14
score: 63.9
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 31..131
e-value: 2.5E-11
score: 43.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 23..187
score: 12.541
NoneNo IPR availableGENE3D3.40.50.300coord: 26..179
e-value: 4.9E-38
score: 132.9
NoneNo IPR availablePANTHERPTHR45766FAMILY NOT NAMEDcoord: 33..168
IPR030101SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1PANTHERPTHR45766:SF3SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1coord: 33..168
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 32..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12308contigEcto-sp13_S_contig12308:65..5023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12308.1937.1mRNA_Ecto-sp13_S_contig12308.1937.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12308 65..5023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12308.1937.1 ID=prot_Ecto-sp13_S_contig12308.1937.1|Name=mRNA_Ecto-sp13_S_contig12308.1937.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=437bp
GRGAWGGSGQAKGTCVAAAAAAAGTSSASKAKEPRKLVVFAHHKEVMDAL
ERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGI
TLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDD
GMISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPPA
MPVSMLYRSERSQRKLEFAPAAPSEQQRSATAAAAAVAARADSTTASWPP
PPPEGDGASSSLSPDRLQQDVDRVDLSGSPTREGGRPSSSSPHRLDGGGG
GGGGVGGGGVSPYLPTAKAAGPVAATASSGPSLPQQASPRKQASPTSSIP
PPSAVAAAAAAAMPLSSDGETNASAVKTTACGGGARTSQQSGSQPLSAGS
QRGGRQATAVGGDGVAKATTVLSAQVQVNSTVGLCT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR030101HARP(SMARCAL1)
IPR027417P-loop_NTPase