prot_Ecto-sp13_S_contig803.19357.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig803.19357.1
Unique Nameprot_Ecto-sp13_S_contig803.19357.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length254
Homology
BLAST of mRNA_Ecto-sp13_S_contig803.19357.1 vs. uniprot
Match: D8LJV1_ECTSI (Similar to Cell growth regulator with RING finger domain 1 (Cell growth regulatory gene 19 protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV1_ECTSI)

HSP 1 Score: 335 bits (860), Expect = 7.740e-115
Identity = 163/182 (89.56%), Postives = 169/182 (92.86%), Query Frame = 0
Query:    1 MSGGASAVGSWTKHWDPSSKQHFYYDPSTGQTTWGRPIPPPKSTESLEREGKGTLLEGIFLQQAKETAQHHDVRPRRRKRGGSKDRKNNDKRIFADDGQPQNVTIEDDEPRKDYISFAKEYFLTAPFRDTGGKQICVICQKRKASAVLFPCEHKCVCARCIEREGFGATRTASEREALCPVC 182
            MSG A AVGSWTKHWDPSSKQHFYYDPSTGQTTWGR +PP KSTESL+REG+G LLEGIFLQQAKETAQHHDVRPRRRKRG SKDRKNN+ R+FADD  PQN TIEDDEPRKDYISFAKEY+LTAPFRDTGGKQICVICQKRKASAVLFPCEHKCVCARCIE EGFGA R ASEREALCPVC
Sbjct:    1 MSGSAPAVGSWTKHWDPSSKQHFYYDPSTGQTTWGRSVPPEKSTESLKREGEGNLLEGIFLQQAKETAQHHDVRPRRRKRGVSKDRKNNN-RVFADDDLPQNETIEDDEPRKDYISFAKEYYLTAPFRDTGGKQICVICQKRKASAVLFPCEHKCVCARCIESEGFGAMRKASEREALCPVC 181          
BLAST of mRNA_Ecto-sp13_S_contig803.19357.1 vs. uniprot
Match: A0A6H5JCM1_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM1_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 2.560e-104
Identity = 148/165 (89.70%), Postives = 157/165 (95.15%), Query Frame = 0
Query:   18 SSKQHFYYDPSTGQTTWGRPIPPPKSTESLEREGKGTLLEGIFLQQAKETAQHHDVRPRRRKRGGSKDRKNNDKRIFADDGQPQNVTIEDDEPRKDYISFAKEYFLTAPFRDTGGKQICVICQKRKASAVLFPCEHKCVCARCIEREGFGATRTASEREALCPVC 182
            +S+QHFYYDPS+GQT WGRPIPP KST+SL+REG+GTLLEGIFLQQAKETAQHHDVRP RRKRGGSKDRKNN+ R+FADDGQ QN TIEDDEP KDYISFAKEY+LTAPFRDTGGKQ CVICQKRKASAVLFPCEHKCVCARCIEREGFGATRTASEREALCPVC
Sbjct:   18 TSQQHFYYDPSSGQTMWGRPIPPSKSTDSLKREGEGTLLEGIFLQQAKETAQHHDVRPWRRKRGGSKDRKNNNNRVFADDGQHQNETIEDDEPCKDYISFAKEYYLTAPFRDTGGKQTCVICQKRKASAVLFPCEHKCVCARCIEREGFGATRTASEREALCPVC 182          
BLAST of mRNA_Ecto-sp13_S_contig803.19357.1 vs. uniprot
Match: A0A7S2C0Y4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0Y4_9STRA)

HSP 1 Score: 111 bits (277), Expect = 3.230e-25
Identity = 71/238 (29.83%), Postives = 110/238 (46.22%), Query Frame = 0
Query:   11 WTKHWDPSSKQHFYYDPSTGQTTWGRPI-------PPPKSTESLEREGKGTLLEGIFLQQAKETAQHHDVRPRRRKRGGSKDRKNNDKRIFADDGQPQNVTIEDDEP-RKDYISFAKEYFLTAPFRDTGGKQICVICQKRKASAVLFPCEHKCVCARCIEREGFGATRT----------ASEREALCPVCCQQVVFVAPCKGGGTEAELYWRWVDEIKPPLPKGFQRNFHNAAILLQI 230
            WT+H D +S   ++Y+ +TG T W  P+       P P    S + + +        L Q         + P    R    + K                T E  EP  KDY S A+EY     +R+  G Q C++C K  ++ VLFPC HKC+C  C +  G   + T            E  + CP+C +++  ++  K  GTE E YW+WV+E+KPPLP+GF+  F +A + +++
Sbjct:   66 WTQHHDDASGHDYFYNDATGVTQWEPPVADALASVPQPHLPASRQPQPRAQAHPQPALCQP-------SLVPSAASRPAVAEPK-------------LTATSETIEPLNKDYASMAREYAQFKAYRNLDGDQFCLLCHKAPSTYVLFPCGHKCICEGCKKSNGVVDSATWQKAMANPNGGGELWSFCPLCNEEIKRIS--KHTGTEYEDYWKWVNEVKPPLPRGFKTKFKSAHVEVRV 281          
BLAST of mRNA_Ecto-sp13_S_contig803.19357.1 vs. uniprot
Match: A0A7S2S490_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S490_9STRA)

HSP 1 Score: 103 bits (257), Expect = 5.020e-23
Identity = 47/127 (37.01%), Postives = 72/127 (56.69%), Query Frame = 0
Query:  112 KDYISFAKEYFLTAPFRDTGGKQICVICQKRKASAVLFPCEHKCVCARCIEREGFGATRTASEREA---LCPVCCQQVVFVAPCKGGGTEAELYWRWVDEIKPPLPKGFQRNFHNAAILLQIQTEPD 235
            KDY+S A+EY  + P+R+  G Q C++C  R +  VLFPC HKC+C  C + + F  +  A   E     CP+C +++  + P  G  TE   YW WV E+KP LP GF+     ++ +L+  + P+
Sbjct:   95 KDYLSMAREYTQSEPYRNLSGAQPCLVCGTRASELVLFPCAHKCLCTACAKSQHFVESSRAKLEEGAWCFCPLCNEEIKRILPHTG--TEVADYWTWVHEVKPVLPGGFRSRLSQSSQMLEHGSIPN 219          
BLAST of mRNA_Ecto-sp13_S_contig803.19357.1 vs. uniprot
Match: A0A7S4HUM7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HUM7_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.160e-19
Identity = 49/118 (41.53%), Postives = 68/118 (57.63%), Query Frame = 0
Query:  112 KDYISFAKEYFLTAPFR--DTGGKQICVICQKRKASA------VLFPCEHKCVCARCIEREGFGATRTASEREALCPVCCQQVVFVAPCKGGGTEAELYWRWVDEIKPPLPKGFQRNF 221
            KDY   A++Y  T P+R  + GG   CV+C++    A      V FPCEH+CVC RC   E  G  R A+    +CP+C +++ FVA  +  G+E E YW WV+E+KP +P  F R F
Sbjct:  367 KDYPGLARQYKSTEPYRGNNPGGNPRCVLCRREGEDASVVLRRVFFPCEHRCVCNRCYREERMGPGRRAN----MCPLCGEEIKFVA--ERNGSERERYWDWVEEVKPFIPAAFVRKF 478          
BLAST of mRNA_Ecto-sp13_S_contig803.19357.1 vs. uniprot
Match: G4Z0K5_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z0K5_PHYSP)

HSP 1 Score: 78.6 bits (192), Expect = 5.760e-13
Identity = 43/122 (35.25%), Postives = 59/122 (48.36%), Query Frame = 0
Query:  112 KDYISFAKEYFLTAPF-RDTGGKQ----ICVICQKRKASAVLFPCEHKCVCARCIEREGFGATRTASEREALCPVCCQQVVFVAPCKGGGTEAELYWRWVDEIKPPLPKGFQRNFHNAAILL 228
            K+Y + A  +    PF R+T GK     +CV+C   K ++V FPC+H CVC +CI+        +     A   +              GTE E YW W+ E +PPLP  F+R F NAA  L
Sbjct:  111 KNYRALASSFKYLQPFCRNTDGKYPAKTVCVLCATGKPTSVFFPCQHLCVCNKCIDGNDMSPEFSMDLDRADIRLILSHT---------GTEEETYWNWLQEAEPPLPVEFKRGFKNAARRL 223          
BLAST of mRNA_Ecto-sp13_S_contig803.19357.1 vs. uniprot
Match: A0A1V9Z5I3_9STRA (RING-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5I3_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 5.850e-10
Identity = 45/151 (29.80%), Postives = 69/151 (45.70%), Query Frame = 0
Query:  113 DYISFAKEYFLTAPFRDTGGKQ-----ICVICQKRKASAVLFPCEHKCVCARCIEREGFGATRTASEREA---LCPVCCQQVVFVAPCKGGGTEAELYWRWVDEIKPPLPKGFQRNFHNAAILL------------QIQTEPDSHKTWDRP 243
            DY+S  + Y +  P+     K      +C++C+  K + V FPCEHKC+C +C++      T+ A +       CPVC + V  +   +  G E ELYW+  DE+ P LP+ F   F      L            ++ T  +   T DRP
Sbjct:  113 DYMSDVEMYNMAKPYSRRPDKTFDPTAVCIVCKTNKITMVFFPCEHKCLCNKCLDYRP-PVTQIAGKGAQWPHACPVCYRDVSVMF--ENTGHETELYWKQ-DEV-PRLPRNFVATFKRTGSRLNTAPSMVFPTLDELSTHEEVDATDDRP 258          
BLAST of mRNA_Ecto-sp13_S_contig803.19357.1 vs. uniprot
Match: T0S352_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S352_SAPDV)

HSP 1 Score: 65.1 bits (157), Expect = 1.050e-8
Identity = 41/124 (33.06%), Postives = 59/124 (47.58%), Query Frame = 0
Query:  113 DYISFAKEYFLTAPFRDTGGKQI-----CVICQKRKASAVLFPCEHKCVCARCIEREGFGATRTASEREA---LCPVCCQQVVFVAPCKGGGTEAELYWRWVDEIKPPLPKGFQRNFHNAAILL 228
            DYI+    Y    PF     K       C++C+ +K   V FPCEHKCVC +C++      T+T  +       CPVC + V  +   +  G E + YW+ +DE+ P LP  F  +F  A   L
Sbjct:  116 DYITDIDRYNSAKPFSRRSDKTFDPEARCIMCKTQKILMVFFPCEHKCVCNKCLDYHP-PVTKTIGKGAHWPHACPVCYRDVTVMF--ENTGFEVDHYWK-LDEV-PHLPNSFVTSFKRAGSRL 234          
BLAST of mRNA_Ecto-sp13_S_contig803.19357.1 vs. uniprot
Match: A0A067CQV5_SAPPC (RING-type domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CQV5_SAPPC)

HSP 1 Score: 64.3 bits (155), Expect = 1.860e-8
Identity = 42/124 (33.87%), Postives = 57/124 (45.97%), Query Frame = 0
Query:  113 DYISFAKEYFLTAPFRDTGGKQI-----CVICQKRKASAVLFPCEHKCVCARCIEREGFGATRTASEREA---LCPVCCQQVVFVAPCKGGGTEAELYWRWVDEIKPPLPKGFQRNFHNAAILL 228
            DYIS  + Y    PF     K       C++C+  K   V FPCEHKCVC +C+E      T+ A +       CPVC + V  +   +  G E + YW+ +DE+ P L   F   F  A   L
Sbjct:  110 DYISDVERYNSAKPFSRRPDKTFDPEARCIMCKTHKIHMVFFPCEHKCVCNKCLEYHP-PVTKIAGKGAHWPHACPVCYRDVTIMF--ENTGFEVDHYWK-LDEV-PHLSNSFVTTFKRAGSRL 228          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig803.19357.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LJV1_ECTSI7.740e-11589.56Similar to Cell growth regulator with RING finger ... [more]
A0A6H5JCM1_9PHAE2.560e-10489.70RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2C0Y4_9STRA3.230e-2529.83Hypothetical protein (Fragment) n=2 Tax=Florenciel... [more]
A0A7S2S490_9STRA5.020e-2337.01Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4HUM7_9STRA1.160e-1941.53Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
G4Z0K5_PHYSP5.760e-1335.25Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A1V9Z5I3_9STRA5.850e-1029.80RING-type domain-containing protein n=1 Tax=Achlya... [more]
T0S352_SAPDV1.050e-833.06Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A067CQV5_SAPPC1.860e-833.87RING-type domain-containing protein n=1 Tax=Saprol... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 6..39
e-value: 8.1E-4
score: 28.7
IPR001202WW domainPFAMPF00397WWcoord: 10..37
e-value: 8.5E-7
score: 29.0
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 11..37
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 5..39
score: 9.655
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 136..182
e-value: 2.4E-4
score: 30.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 136..182
score: 10.365
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 133..186
e-value: 2.5E-6
score: 27.2
NoneNo IPR availableGENE3D2.20.70.10coord: 9..51
e-value: 3.7E-7
score: 31.6
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 135..189
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 122..191
e-value: 3.1E-9
score: 38.2
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 10..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig803contigEcto-sp13_S_contig803:12496..15742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig803.19357.1mRNA_Ecto-sp13_S_contig803.19357.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig803 12496..15742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig803.19357.1 ID=prot_Ecto-sp13_S_contig803.19357.1|Name=mRNA_Ecto-sp13_S_contig803.19357.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp
MSGGASAVGSWTKHWDPSSKQHFYYDPSTGQTTWGRPIPPPKSTESLERE
GKGTLLEGIFLQQAKETAQHHDVRPRRRKRGGSKDRKNNDKRIFADDGQP
QNVTIEDDEPRKDYISFAKEYFLTAPFRDTGGKQICVICQKRKASAVLFP
CEHKCVCARCIEREGFGATRTASEREALCPVCCQQVVFVAPCKGGGTEAE
LYWRWVDEIKPPLPKGFQRNFHNAAILLQIQTEPDSHKTWDRPPEAACCC
ILS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR036020WW_dom_sf