prot_Ecto-sp13_S_contig8006.19326.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8006.19326.1
Unique Nameprot_Ecto-sp13_S_contig8006.19326.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length533
Homology
BLAST of mRNA_Ecto-sp13_S_contig8006.19326.1 vs. uniprot
Match: D7FWC7_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC7_ECTSI)

HSP 1 Score: 621 bits (1602), Expect = 1.770e-208
Identity = 334/387 (86.30%), Postives = 340/387 (87.86%), Query Frame = 0
Query:    1 MESGATPPAFLAARAACGQSHTVLVSTAGDAWACGRNRSGQLGVDPDIVGETSTPVRVPLEGEGXXXXXXXXDAVQAAAGRAHSLVLLSDGRVIGFGSDEFGALGPAEPPAAAAAAVGDSMEVDTATPRPCYHWKPTVIEALRGRWVASVSAGGEQSFALAVGPEXXXXXXXXXXXXXXXXXLPSLTGDAASVAGGLGRPDEKATVAEGMSVDSDSAAEQKFTPAPAVAESETRREGGGEDADGGPASLAGAAGPLVRRGSEALSLRRRFSLPPTLRMWTAGEFLQLIRRAEEAAVTGDSSDVEGEASRGGAEEAGVLEAVRQTFASPSVLSACFNIEAPAEARNGNLGRTQTEEGRGQGTVFPRVDAAGLEAVYAGLAGLGPRVVE 387
            M+SGATPPAFLAARAACGQSHTVLVSTAGDAWACGRNRSGQLGVDP+IVGETSTPVRVPLEGEG        DAVQAAAGRAHSLVLLSDGRV+GFGSDEFGALGP EPPAAAAAAVGDSMEVDTATPR CYHWKPTVIEAL GRWVASVSAGGEQSF LAVGP                  LPS TGDAASVAG +G PD+K TVA  MSVDSDSAAEQKFTPAPA  ESE RREGGGEDA GGP SLAGAAGPLVRRGSEALSLRRRFSLPPTLRMWTAGEFLQLIRRAE AAV GDSSDVEGEASRGGAEEA VLEAVRQTFASPSVLSACFNIEAPAEAR+GNLGR QT EGRGQGT FPRVDAAGLEAVYAGLAGLGPRVVE
Sbjct:  215 MKSGATPPAFLAARAACGQSHTVLVSTAGDAWACGRNRSGQLGVDPNIVGETSTPVRVPLEGEGGGGGAVEADAVQAAAGRAHSLVLLSDGRVVGFGSDEFGALGPTEPPAAAAAAVGDSMEVDTATPRSCYHWKPTVIEALSGRWVASVSAGGEQSFVLAVGPAPPPAVGAGAGTAHPAPPLPSFTGDAASVAGAMGWPDDKTTVAAAMSVDSDSAAEQKFTPAPAATESEARREGGGEDAGGGPGSLAGAAGPLVRRGSEALSLRRRFSLPPTLRMWTAGEFLQLIRRAEAAAVAGDSSDVEGEASRGGAEEAAVLEAVRQTFASPSVLSACFNIEAPAEARHGNLGRKQTGEGRGQGTAFPRVDAAGLEAVYAGLAGLGPRVVE 601          
BLAST of mRNA_Ecto-sp13_S_contig8006.19326.1 vs. uniprot
Match: A0A6H5K2Y9_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y9_9PHAE)

HSP 1 Score: 625 bits (1612), Expect = 7.930e-205
Identity = 353/424 (83.25%), Postives = 365/424 (86.08%), Query Frame = 0
Query:    1 MESGATPPAFLAARAACGQSHTVLVSTAGDAWACGRNRSGQLGVDPDIVGETSTPVRVPLEGEGXXXXXXXXDAVQAAAGRAHSLVLLSDGRVIGFGSDEFGALGPAEPP-AAAAAAVGDSMEVDTATPRPCYHWKPTVIEALRGRWVASVSAGGEQSFALAVGPEXXXXXXXXXXXXXXXXXLPSLTGDAASVAGGLGRPDEKATVAEGMSVDSDSAAEQKFTPAPAVAESETRREGGGEDADGGPASLAGAAG---PLVRRGSEALSLRRRFSLPPTLRMWTAGEFLQLIRRAEEAAVTGDSSDVEGEASRGGAEEAGVLEAVRQTFASPSVLSACFNIEAPAEARNGNLGRTQTEEGRGQGTVFPRVDAAGLEAVYAGLAGLGPRVVETLWSSIEEVRSRYR--QRCPDTGCTLFVPIPSA 418
            M+SGATPPAFLAARAACGQSHTVLVSTAG+AWACGRNRSGQLGVDPDIVGETSTPVRVPLEGEGXXXXXX   AVQAAAGRAHSLVLLSDGRV+GFGSDEFGALGPAEPP AAAAAAVGDSMEVDTAT R CYHWKPTVIEAL GRWVASVSAGGEQSFA+AVGP                  LPS  GDAASV GGLGRPDEKA VA  MSVD DSAAE+KFTPAPAVAESE RREGGGEDAD GP SLAGAAG   PLVRRGSEALSLRRRFSLPPTLRMWT GEFLQLIR+AE AAVTG+SSDVEGEASRGGAEEA VLEAVRQTFASPSVLSACFNIEAPAEAR+GNLGRTQT EGRGQGT FPRVDAAGLEAVYAGLAGLGPRVV+TLWSSIEE  +  R  Q+ P T        PS+
Sbjct:  637 MKSGATPPAFLAARAACGQSHTVLVSTAGEAWACGRNRSGQLGVDPDIVGETSTPVRVPLEGEGXXXXXXAVGAVQAAAGRAHSLVLLSDGRVVGFGSDEFGALGPAEPPVAAAAAAVGDSMEVDTATHRSCYHWKPTVIEALSGRWVASVSAGGEQSFAIAVGPAQPPAVGAGAGTAHPPPPLPSSPGDAASVVGGLGRPDEKAPVAAAMSVDGDSAAERKFTPAPAVAESEARREGGGEDADRGPGSLAGAAGAAGPLVRRGSEALSLRRRFSLPPTLRMWTVGEFLQLIRKAEAAAVTGNSSDVEGEASRGGAEEAAVLEAVRQTFASPSVLSACFNIEAPAEARHGNLGRTQTGEGRGQGTAFPRVDAAGLEAVYAGLAGLGPRVVDTLWSSIEEGMAAVREAQQSPLTSSKSRCSRPSS 1060          
BLAST of mRNA_Ecto-sp13_S_contig8006.19326.1 vs. uniprot
Match: UPI0019052934 (regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=2 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI0019052934)

HSP 1 Score: 63.2 bits (152), Expect = 7.760e-7
Identity = 49/161 (30.43%), Postives = 71/161 (44.10%), Query Frame = 0
Query:    1 MESGATPPAFLAARAACGQSHTVLVSTAGDAWACGRNRSGQLGVDPDIVGETSTPVRVPLEGEGXXXXXXXXDAVQAAAGRAHSLVLLSDGRVIGFGSDEFGALGPAEPPAAAAAAVGDSMEVDTATPRPCYHWKPTVIEALRGRWVASVSAGGEQSFALA 161
            ++ GA+  +     AACG++HT+L+  AGD W  G N  GQ G  P     +   V  P               V A+AG   S+VL   G+V  FGS E G LG            G+ +     T     H +P  I+A  G+ +  +++G + S ALA
Sbjct:  119 VQCGASKNSIKFINAACGRAHTLLIDDAGDLWTAGINTLGQCGHPPRPEVTSFKKVSGPW-----LKTTPPDKVVAASAGITFSIVLTESGKVYSFGSAEMGQLGNGR--------TGEHISTGNKTAFDVEH-EPIRIKAFEGKKIVQIASGQQHSIALA 265          
BLAST of mRNA_Ecto-sp13_S_contig8006.19326.1 vs. uniprot
Match: A0A0C2WDX0_9AGAM (PHD-type domain-containing protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2WDX0_9AGAM)

HSP 1 Score: 60.5 bits (145), Expect = 5.630e-6
Identity = 48/146 (32.88%), Postives = 72/146 (49.32%), Query Frame = 0
Query:   15 AACGQSHTVLVSTAGDAWACGRNRSGQLGVDPDIVGETSTPVRVPLEGEGXXXXXXXXDAVQAAAGRAHSLVLLSDGRVIGFGSDEFGALG---PAEPPAAAAAAVGDSMEVDTATPRPCYHWKPTVIEALRGRWVASVSAGGEQS 157
            AA G++H++LV++ G  W+ G N SGQ G  P       +P R P+EGE           +QAAAG   S+VL + G+V  FGS E G LG     E    +  AV D+  +            P +++ L GR +  +++G + S
Sbjct:  122 AATGRAHSLLVASDGSVWSAGLNTSGQCGHSPS---PEVSPFR-PIEGE---WRGSGDRVIQAAAGNTFSIVLTASGKVYAFGSGEKGQLGNGRTGEHIVTSGRAVFDTEHI------------PLLVKGLEGRHIIQIASGLQHS 248          
BLAST of mRNA_Ecto-sp13_S_contig8006.19326.1 vs. uniprot
Match: A0A4S4KB07_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KB07_9AGAM)

HSP 1 Score: 57.8 bits (138), Expect = 2.890e-5
Identity = 45/154 (29.22%), Postives = 69/154 (44.81%), Query Frame = 0
Query:    7 PPAFLAARAACGQSHTVLVSTAGDAWACGRNRSGQLGVDPDIVGETSTPVRVPLEGEGXXXXXXXXDAVQAAAGRAHSLVLLSDGRVIGFGSDEFGALGPAEPPAAAAAAVGDSMEVDTATPRPCYHWKPTVIEALRGRWVASVSAGGEQSFAL 160
            P   +   AA G++HT+LV++ GD W  G N  GQ G  P     + T +R P  GE           V+  AG   S++L   G+V   GS E G LG          A G+ +  D        + +P +++ L G+ +  VS G + + A+
Sbjct:   49 PAGVVFVHAAVGRAHTLLVASNGDVWTAGANTLGQCGHSPCPEVPSFTLLRGPWPGE------VKEKIVKVGAGVNFSILLAESGKVYALGSGEHGQLGNGR--TGEHIATGNKIMFDV-------YSEPVLVKGLEGKVITHVSCGHQHTIAM 187          
BLAST of mRNA_Ecto-sp13_S_contig8006.19326.1 vs. uniprot
Match: A4RS67_OSTLU (Uncharacterized protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RS67_OSTLU)

HSP 1 Score: 57.0 bits (136), Expect = 3.740e-5
Identity = 53/150 (35.33%), Postives = 70/150 (46.67%), Query Frame = 0
Query:   16 ACGQSHTVLVSTAGDAWACGRNRSGQLGVDPDIVGETSTPVRVPLEGEGXXXXXXXXDAVQAAAGRAHSLVLLSDGRVIGFGSDEFGALGPAEPPAAAAAAVGDSMEVDTATPRPCYHWKPTVIEALRG--RWVASVSAGGEQSFALAVG 163
            A G +HT+ V  AG  +ACGR RSGQLG+     G     +   L G            V A AG AHS+ + SDG V  +G   +G LG  +   AAAA   + +      P PC      ++E+L      VAS+SAGG  S  +  G
Sbjct:   62 ATGFNHTLAVDRAGRLFACGRGRSGQLGLGTFRDGAPFARIAA-LRG---------MRVVSAVAGGAHSICITSDGNVWSWGDCRYGQLGLGDLTFAAAAGWNNGV------PWPC------LVESLNDMDEPVASMSAGGAHSIFVTTG 189          
BLAST of mRNA_Ecto-sp13_S_contig8006.19326.1 vs. uniprot
Match: G4TYF7_SERID (Uncharacterized protein n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TYF7_SERID)

HSP 1 Score: 56.2 bits (134), Expect = 4.030e-5
Identity = 42/146 (28.77%), Postives = 67/146 (45.89%), Query Frame = 0
Query:   15 AACGQSHTVLVSTAGDAWACGRNRSGQLGVDPDIVGETSTPVRVPLEGEGXXXXXXXXDAVQAAAGRAHSLVLLSDGRVIGFGSDEFGALGPAEPPAAAAAAVGDSMEVDTATPRPCYHWKPTVIEALRGRWVASVSAGGEQSFAL 160
            AA G++HT+LV++ G  W+ G N SGQ G +P         +    + +G          +QA+AG   SLVL + G+V  FGS E G LG            G+ +           H +P +++ L  R +  +++G + S  L
Sbjct:  119 AATGRAHTLLVASDGQVWSAGINTSGQCGHEPSAEVSPFKAIEGDWKAQGDK-------VIQASAGNTFSLVLTASGKVYAFGSGEKGQLGNGR--------TGEHIITSGRAVFDTEH-EPLLVKGLADRKIVQIASGLQHSLVL 248          
BLAST of mRNA_Ecto-sp13_S_contig8006.19326.1 vs. uniprot
Match: M1V7F3_CYAM1 (Similar to UVB-resistance protein UVR8 n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V7F3_CYAM1)

HSP 1 Score: 57.0 bits (136), Expect = 5.690e-5
Identity = 46/150 (30.67%), Postives = 70/150 (46.67%), Query Frame = 0
Query:   17 CGQSHTVLVSTAGDAWACGRNRSGQLGVDPDIVGETSTPVRVPLEGEGXXXXXXXXDAVQAAAGRAHSLVLLSDGRVIGFGSDEFGALGPAEPPAAAAAAVGDSMEVDTA---TPRPCYHWKPTVIE--ALRGRWVASVSAGGEQSFALA 161
            CG  H+V +S  G  + CG    GQLG       +  + + V    E           ++ A+G  H+LVL  DGR+ GFGS+E+G LG           +  S + +TA   T + C   +P ++   AL GR +A ++ G   S AL+
Sbjct:  207 CGYHHSVALSAIGVVYTCGWGAYGQLG--HGSCNDEPSLLAVTFRDE-HGNALPNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLG-----------ITMSCDQETAENPTSKQCVFSEPRLLTGGALAGRRIAQIACGERHSVALS 342          
BLAST of mRNA_Ecto-sp13_S_contig8006.19326.1 vs. uniprot
Match: A0A7S0VSQ4_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VSQ4_9CRYP)

HSP 1 Score: 55.5 bits (132), Expect = 5.860e-5
Identity = 37/92 (40.22%), Postives = 48/92 (52.17%), Query Frame = 0
Query:   14 RAACGQSHTVLVSTAGDAWACGRNRSGQLGVDPDIVGETSTPVRVPLEGEGXXXXXXXXDAVQAAAGRAHSLVLLSDGRVIGFGSDEFGALG 105
            + +CG SHT+ V + GD   CGRN SGQLG   D     S+ V V + G G        DAV       H++V +S G +IGFGS+    LG
Sbjct:  100 KVSCGASHTLFVMSHGDLRGCGRNDSGQLGTGND----ESSDVPVRILGPGNRFGRSVLDAVA----NEHTIVTMSGGALIGFGSNHDAQLG 183          
BLAST of mRNA_Ecto-sp13_S_contig8006.19326.1 vs. uniprot
Match: A0A182FGC0_ANOAL (HECT domain-containing protein n=4 Tax=Nyssorhynchus TaxID=44543 RepID=A0A182FGC0_ANOAL)

HSP 1 Score: 57.4 bits (137), Expect = 6.510e-5
Identity = 47/148 (31.76%), Postives = 65/148 (43.92%), Query Frame = 0
Query:   13 ARAACGQSHTVLVSTAGDAWACGRNRSGQLGVDPDIVGETSTPVRVPLEGEGXXXXXXXXDAVQAAAGRAHSLVLLSDGRVIGFGSDEFGALGPAEPPAAAAAAVGDSMEVDTATPRPCYHWKPTVIEALRGRWVASVSAGGEQSFAL 160
            ARAACG SHT+L++  G  ++CG N  GQLG D + +      +   LE              QA  G AHSL L + G+V  +GS+  G LG                E DTA         P +I ++  + V  ++AG     AL
Sbjct:   39 ARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALEN---------YIITQACCGTAHSLALTNWGQVYSWGSNAVGQLG---------------QESDTAR-----QIVPRLIRSIAAKQVVQIAAGHYHCLAL 157          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8006.19326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FWC7_ECTSI1.770e-20886.30HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K2Y9_9PHAE7.930e-20583.25HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
UPI00190529347.760e-730.43regulator of chromosome condensation 1/beta-lactam... [more]
A0A0C2WDX0_9AGAM5.630e-632.88PHD-type domain-containing protein n=1 Tax=Serendi... [more]
A0A4S4KB07_9AGAM2.890e-529.22Uncharacterized protein (Fragment) n=1 Tax=Phellin... [more]
A4RS67_OSTLU3.740e-535.33Uncharacterized protein (Fragment) n=1 Tax=Ostreoc... [more]
G4TYF7_SERID4.030e-528.77Uncharacterized protein n=1 Tax=Serendipita indica... [more]
M1V7F3_CYAM15.690e-530.67Similar to UVB-resistance protein UVR8 n=1 Tax=Cya... [more]
A0A7S0VSQ4_9CRYP5.860e-540.22Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A182FGC0_ANOAL6.510e-531.76HECT domain-containing protein n=4 Tax=Nyssorhynch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 5..174
e-value: 6.4E-23
score: 83.1
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 14..160
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 29..87
e-value: 1.9E-7
score: 31.6
coord: 90..160
e-value: 1.5E-5
score: 25.5
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 15..25
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 29..90
score: 12.655
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 91..163
score: 10.002
NoneNo IPR availablePANTHERPTHR45622FAMILY NOT NAMEDcoord: 14..349

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8006contigEcto-sp13_S_contig8006:3372..6553 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8006.19326.1mRNA_Ecto-sp13_S_contig8006.19326.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8006 252..6823 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8006.19326.1 ID=prot_Ecto-sp13_S_contig8006.19326.1|Name=mRNA_Ecto-sp13_S_contig8006.19326.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=533bp
MESGATPPAFLAARAACGQSHTVLVSTAGDAWACGRNRSGQLGVDPDIVG
ETSTPVRVPLEGEGGGGGAAAADAVQAAAGRAHSLVLLSDGRVIGFGSDE
FGALGPAEPPAAAAAAVGDSMEVDTATPRPCYHWKPTVIEALRGRWVASV
SAGGEQSFALAVGPEPPPAVGVGAGTAHPPPPLPSLTGDAASVAGGLGRP
DEKATVAEGMSVDSDSAAEQKFTPAPAVAESETRREGGGEDADGGPASLA
GAAGPLVRRGSEALSLRRRFSLPPTLRMWTAGEFLQLIRRAEEAAVTGDS
SDVEGEASRGGAEEAGVLEAVRQTFASPSVLSACFNIEAPAEARNGNLGR
TQTEEGRGQGTVFPRVDAAGLEAVYAGLAGLGPRVVETLWSSIEEVRSRY
RQRCPDTGCTLFVPIPSAAFSEWQRSGRRNNPLRPPRNLGSFVHLRPPPC
RASRPPEPRSSSSTGRGPPSRETWGSLRTRARTRPWRGSARRCSGSRGTP
AGGSCAASKRTILRNSSPPDWSSPWSSTFPSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens