prot_Ecto-sp13_S_contig12303.1932.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12303.1932.1
Unique Nameprot_Ecto-sp13_S_contig12303.1932.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length274
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12303.1932.1 vs. uniprot
Match: A0A6H5K0P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P9_9PHAE)

HSP 1 Score: 471 bits (1212), Expect = 9.190e-167
Identity = 235/255 (92.16%), Postives = 243/255 (95.29%), Query Frame = 0 
Query:    1 MASLRLARAGAINHGVFLSGSLTNDGHARIDAFVDRWHCRRSAERSGLILAAVLEHVARSVRTRLLAGYLDRWRKTRAPLPRTLLRPKTFLLLDMRRRDNLHRVLTAWGLLTRQMHADRALTRRKGVRVARQLGRGDAKLRAAGFSRWIGATRARRDEESRRVGCFERWKLFVLLCQHNSSWGVERAMRVLRRAWLQHMAFHRLSAWRAERVAARMLRDALTATRLRGAWVTWRCTVARDNRSMMARQAWCVLSS 255
            MASLRLARAGAIN GVFLSGSLTNDGHAR+DAFVDRWHCRRSAERSGLILAAVLEH+ARSVRTRLLAGYLDRWR+TRAPLPRTLLRPKTFLLLDMRRRDNLH+ LTAWGLLTRQ+HADRALTRRKG RVARQL RGDAKLRAAGFSRWI ATRARRDEESRRVGCFERWKLFVLLCQHNSSWGVERAMRVLRRAWLQH+AFHRLSAW AERVAAR LRD LT T LRGAWV WRCTVARDNRSMMARQAWCV+ +
Sbjct:    1 MASLRLARAGAINQGVFLSGSLTNDGHARVDAFVDRWHCRRSAERSGLILAAVLEHLARSVRTRLLAGYLDRWRRTRAPLPRTLLRPKTFLLLDMRRRDNLHKALTAWGLLTRQLHADRALTRRKGARVARQLRRGDAKLRAAGFSRWIEATRARRDEESRRVGCFERWKLFVLLCQHNSSWGVERAMRVLRRAWLQHLAFHRLSAWHAERVAARALRDVLTTTLLRGAWVAWRCTVARDNRSMMARQAWCVIEA 255
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12303.1932.1 vs. uniprot
Match: D7FH10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH10_ECTSI)

HSP 1 Score: 469 bits (1206), Expect = 8.720e-166
Identity = 235/273 (86.08%), Postives = 248/273 (90.84%), Query Frame = 0 
Query:    1 MASLRLARAGAINHGVFLSGSLTNDGHARIDAFVDRWHCRRSAERSGLILAAVLEHVARSVRTRLLAGYLDRWRKTRAPLPRTLLRPKTFLLLDMRRRDNLHRVLTAWGLLTRQMHADRALTRRKGVRVARQLGRGDAKLRAAGFSRWIGATRARRDEESRRVGCFERWKLFVLLCQHNSSWGVERAMRVLRRAWLQHMAFHRLSAWRAERVAARMLRDALTATRLRGAWVTWRCTVARDNRSMMARQAWCVLSSGKLGGRATQENCRFGTLP 273
            MASLRLARAGAIN GVF+SGSL+NDGHAR+DAFVDRWHCRRSAERSGLILAAVLEH+A SVRTRLLAGYLDRWR  RAPLPRTLLRPKTFLL+D RRRDNLH+ LTAWGLLTRQ++A+RAL RRKG RVARQLGR +AKLRAAGFSRWI AT  RRDEE RRVGCFERWK+FVLLCQHNSSWGVERAMRVL RAWLQH+AFHRL AWRAERVAAR LRDA +AT LRGAWV WR TVA DNR  MARQAW VLSSGKLGGRATQENCRFG LP
Sbjct:    1 MASLRLARAGAINQGVFVSGSLSNDGHARVDAFVDRWHCRRSAERSGLILAAVLEHLAWSVRTRLLAGYLDRWRSNRAPLPRTLLRPKTFLLVDTRRRDNLHKALTAWGLLTRQLYAERALARRKGARVARQLGRREAKLRAAGFSRWIDATLERRDEERRRVGCFERWKIFVLLCQHNSSWGVERAMRVLHRAWLQHLAFHRLLAWRAERVAARALRDAFSATLLRGAWVAWRFTVALDNRDRMARQAWYVLSSGKLGGRATQENCRFGALP 273
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12303.1932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0P9_9PHAE9.190e-16792.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH10_ECTSI8.720e-16686.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12303contigEcto-sp13_S_contig12303:2165..4477 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12303.1932.1mRNA_Ecto-sp13_S_contig12303.1932.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12303 2165..4477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12303.1932.1 ID=prot_Ecto-sp13_S_contig12303.1932.1|Name=mRNA_Ecto-sp13_S_contig12303.1932.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp
MASLRLARAGAINHGVFLSGSLTNDGHARIDAFVDRWHCRRSAERSGLIL
AAVLEHVARSVRTRLLAGYLDRWRKTRAPLPRTLLRPKTFLLLDMRRRDN
LHRVLTAWGLLTRQMHADRALTRRKGVRVARQLGRGDAKLRAAGFSRWIG
ATRARRDEESRRVGCFERWKLFVLLCQHNSSWGVERAMRVLRRAWLQHMA
FHRLSAWRAERVAARMLRDALTATRLRGAWVTWRCTVARDNRSMMARQAW
CVLSSGKLGGRATQENCRFGTLP*
back to top