mRNA_Ecto-sp13_S_contig80.19314.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig80.19314.1
Unique NamemRNA_Ecto-sp13_S_contig80.19314.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: D8LGH0_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGH0_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 4.290e-122
Identity = 275/329 (83.59%), Postives = 278/329 (84.50%), Query Frame = 2
Query:  236 DHNSDRTTRGYVLTALTKLAGRLGEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARA-ALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXX-PGGEGKAATVDLMADIFAAKPAQPPAAAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGA 1216
            DHNSDRTTRGYVLTALTKLA RLGEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNED   DD             LPSFRISKASKHRRG  XXXXXXXXXXXXX    ALGAGKKTVQPLAGPAASAGGI+SSG PSRQEQAAAVPNLLDLDDLFGG            PGGEGKAATVDLMADIF+AKPAQPPAAAGVVDPFAPTPAPATAANGS  XXXXX XXXXXXXXXX          XXXXXXXXXX SFVAFEKGGLTVTFELSKPSP EDPSTTLVKAIFR+SGA
Sbjct:  513 DHNSDRTTRGYVLTALTKLAERLGEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNED---DDDEGRG--------LPSFRISKASKHRRGGSXXXXXXXXXXXXXXXXXALGAGKKTVQPLAGPAASAGGIISSGAPSRQEQAAAVPNLLDLDDLFGGGPGDSAAAVAAAPGGEGKAATVDLMADIFSAKPAQPPAAAGVVDPFAPTPAPATAANGS--XXXXXTXXXXXXXXXXPGREAAPAVTXXXXXXXXXXPSFVAFEKGGLTVTFELSKPSPTEDPSTTLVKAIFRHSGA 828          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A7S2S951_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S951_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.360e-33
Identity = 155/422 (36.73%), Postives = 210/422 (49.76%), Query Frame = 2
Query:  260 RGYVLTALTKLAGRLGEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGG------------EGKAATVDLMADIFAAKPAQPPA------AAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----FVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPPGY 1456
            R  +LTA  KL+ RL   +   I   +++   SM++ELQ R+CEF  LL      LR   L++MP  DEE ++ +RAR    D GA++                                             +A+ AG + +  +A PA+    + + GG        A PNLLDLDD+FGG            G                A   DL+ADIF+A PA P A         ++DPF    A +TAA  S XXX             XXXXXXXXXXXXXXXXXXXXXX        AFEK GL +T ELSKP+P+ DP  + +   F NS  SD + L FQAAVPK++ + +Q ASG+V+ + G+G+V QV+ + NS  G K L++K+ + YE  G+ ++EMA + SFP GY
Sbjct:    5 RSLLLTAFVKLSQRLQGSELPRILAFIESQRASMDMELQQRACEFSTLLETTWDSLRPMALEQMPAMDEEKLKAKRAREATADVGAENGV-------------------------------------------SAITAGTQGMA-IAAPAS----LPAPGGD-------AGPNLLDLDDIFGGGGAGGPPAGPSSGALPPVTANGAAPPAAPATATDLLADIFSAPPAAPXAXXXXAPGGAMLDPFGGALA-STAATPSXXXXQPAAPVLDPFAAAXXXXXXXXXXXXXXXXXXXXXXXXQNPVITAFEKNGLKLTIELSKPNPS-DPQASDLLCTFTNSTPSDFSNLMFQAAVPKFVAMNIQQASGTVIPSMGSGSVTQVISVRNSQLGMKKLMLKMIIRYESMGSAVEEMAQMTSFPSGY 369          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A7S2WL96_9STRA (AP-1 complex subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL96_9STRA)

HSP 1 Score: 148 bits (373), Expect = 4.160e-33
Identity = 158/429 (36.83%), Postives = 214/429 (49.88%), Query Frame = 2
Query:  239 HNSDRTTRGYVLTALTKLAGRLGEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGG------------EGKAATVDLMADIFAAKPAQPPA------AAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----FVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPPGY 1456
            H +  TTR  +LTA  KL+ RL   +   I   +++   SM++ELQ R+CEF  LL      LR   L++MP  DEE ++ +RAR    D GA++                                             +A+ AG + +  +A PA+    + + GG        A PNLLDLDD+FGG            G                A   DL+ADIF+A PA P A         ++DPF    A +TAA  S XXX             XXXXXXXXXXXXXXXXXXXXXX        AFEK GL +T ELSKP+P+ DP  + +   F NS  SD + L FQAAVPK++ + +Q ASG+V+ + G+G+V QV+ + NS  G K L++K+ + YE  G+ ++EMA + SFP GY
Sbjct:  534 HIATPTTRSLLLTAFVKLSQRLQGSELPRILAFIESQRASMDMELQQRACEFSTLLETTWDSLRPMALEQMPAMDEEKLKAKRAREATADVGAENGV-------------------------------------------SAITAGTQGMA-IAAPAS----LPAPGGD-------AGPNLLDLDDIFGGGGAGGPPAGPSSGALPPVTANGAAPPAAPATATDLLADIFSAPPAAPXAXXXXAPGGAMLDPFGGALA-STAATPSXXXXQPAAPVLDPFAAAXXXXXXXXXXXXXXXXXXXXXXXXQNPVITAFEKNGLKLTIELSKPNPS-DPQASDLLCTFTNSTPSDFSNLMFQAAVPKFVAMNIQQASGTVIPSMGSGSVTQVISVRNSQLGMKKLMLKMIIRYESMGSAVEEMAQMTSFPSGY 905          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: W7TQP3_9STRA (AP-1 complex subunit gamma n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP3_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.160e-32
Identity = 133/424 (31.37%), Postives = 184/424 (43.40%), Query Frame = 2
Query:  236 DHNSDRTTRGYVLTALTKLAGR-------LGEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGGEGKAATV------DLMADIFAAK-PAQPPAAAGVV--DPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVG-GAKMQEMASVGSFPPGY 1456
            +H + + TRGYVL AL KL+ R       + + +   + GLL  Y  S+ LELQ RSCEF Q+L P +  +R  ++ R+P  DE  +  RR RF     G +D                                                G GK+ V  + G      G    GG      +    +LLDL+++FGG            G     A++      DL++DIFA+  P   PA+A V    PF        A  G                     XX                 S  AF++ GL +T ELSKPSPA+DPS +L+   F N     +T L FQ AVP+Y++LE+ PASGS +    AG+V Q VR+ NSL GQK L +K+K+ Y  G G  + +M +V +FP GY
Sbjct:  517 NHGATQVTRGYVLVALLKLSDRFAAASPSVSDAEMRRLAGLLSRYDTSLQLELQQRSCEFRQVLAPGVEGVRPEIVGRIPPLDEAMLTARRGRF----PGRED------------------------------------------------GGGKRGVS-MEGSLFGEEGTGKKGGKEGPAASGGATDLLDLEEIFGGAPGPGNGGNGMTGAVTGGASLKGGESADLLSDIFASNVPVAMPASAPVALSTPFDQV---VVAEEGH-----LPHAPPPSFSSSSSLXXPTPSAPLPPALPQQTTASITAFDQDGLRITMELSKPSPADDPSASLLLCRFDNRTDVTLTNLSFQCAVPRYVKLELSPASGSTLLPNTAGSVTQAVRVANSLLGQKPLQLKIKVQYTDGRGQPITKMGTVANFPAGY 879          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A5D6XNF9_9STRA (AP-1 complex subunit gamma n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNF9_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.670e-27
Identity = 138/411 (33.58%), Postives = 191/411 (46.47%), Query Frame = 2
Query:  239 HNSDRTTRGYVLTALTKLAGRLGEDQE-DAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGP--AASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGGEGKA-ATVDLMADIFAA--KPAQPPAAAGVVDPFAPTPA--PATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFP 1447
            H++  TT+ Y L A+ KL  R     E   +  L+ ++  S+ L+LQ R+ E+  L +P+   LR  +L  MP  D   +R+R+ R R+                       F  S A  +                            T   L G   A S   + SS  P+  + AAA PNLLDLD     XXXXXXXXXXX      A A VDL+ADIF+    PA PPAA     PF  + A  P T+++ S                                       +  A+EK GL+V  E+SKP+  +DPS T + A  RN+ A  V    F AA PKY++L+M+PASG VV     GAV Q+V+I NS+ G+K +LM++KL + V G K++EMA+V +FP
Sbjct:  519 HHATDTTKAYALNAMVKLTTRFQHPAEVQQLAHLIASFKSSVVLDLQQRATEYTTLGKPQWAALRPDVLANMPAIDVTKLRSRQNRTRS--------------------ASGFGSSTAVNN----------------------------TSIELLGDDDAFSTRAVSSSALPT--QSAAATPNLLDLDXXXXXXXXXXXXXXXXXXXXXPAPAAVDLLADIFSTGPSPAAPPAA-----PFGLSVAAVPTTSSSSSAASDLLGLLDFGAPAVAAKPAPPPSNP------------TIRAYEKNGLSVDLEISKPNK-DDPSVTFIAATVRNASALPVQNFLFLAAFPKYIKLKMEPASGDVVPPHSGGAVTQLVKIQNSMHGEKPVLMRIKLDFTVNGTKLEEMAAVSNFP 861          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: K3WEF7_GLOUD (AP-1 complex subunit gamma n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEF7_GLOUD)

HSP 1 Score: 126 bits (316), Expect = 3.610e-26
Identity = 130/410 (31.71%), Postives = 178/410 (43.41%), Query Frame = 2
Query:  239 HNSDRTTRGYVLTALTKLAGRLGEDQE-DAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGGEGKAATVDLMADIFAAKPAQPPAAAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----SFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPP 1450
            H S  TT+ Y L A+ KL  R     E   ++ L+ +++ S+ LELQ R+ E+  L +P+   LR  +L  MP  D   +RNR+ R  +   G +               P      A K                                            ++S  P   +QAA  PNLLDLDD+FGG            GG   +A    +       PA  PAA   VD  A             XXXXXXXXXXXX                                  A++K GLTV  E+SKP+  +DPS T + A  RNS A  +    F AA PKY++L+M+PASG +V     G V Q+V+I NS+ G+K +LM++KL + V G+K++EMA+V SFPP
Sbjct:  519 HASTDTTKAYALNAMMKLTTRFQSQSELQKLQHLIGSFNSSVVLELQQRASEYTTLGQPQWASLRPDILANMPAIDVTKLRNRQTRVNSSSVGNNQSADLLLNDE-----PLTSAMDAVK--------------------------------------------ITSDAP---KQAAPQPNLLDLDDIFGG------------GGSSASAPSSAL-------PAAAPAAPAAVDLLAXXXXXXXXXXXXXXXXXXXXXXXXXVSASAGVTSSANDLLGLMDFGAPAPAPPQNPKLRAYDKNGLTVDLEISKPNK-DDPSVTFIAATVRNSTAIPLQNFLFLAAFPKYIKLKMEPASGDMVPPHNGGTVTQLVKIQNSMHGEKPVLMRIKLEFTVNGSKVEEMAAVNSFPP 856          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A1Y1I093_KLENI (AP-1 complex subunit gamma n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I093_KLENI)

HSP 1 Score: 120 bits (302), Expect = 1.790e-24
Identity = 62/116 (53.45%), Postives = 82/116 (70.69%), Query Frame = 2
Query: 1100 SFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFP 1447
            S VAFEK GL V F+ SKP  A +   T +KA + NSG S  T   FQAAVPK++ L ++PASGSVV AG AG+V Q + +TNSLQGQKNL+M+L++ Y+V G+++ E   V +FP
Sbjct:  734 SIVAFEKDGLRVHFDFSKP--AANSQQTTIKATYTNSGPSPFTDFVFQAAVPKFMTLSLEPASGSVVPAGQAGSVTQTINVTNSLQGQKNLVMRLRISYKVNGSEVLEQGQVSNFP 847          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: F0W1Q3_9STRA (AP-1 complex subunit gamma n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W1Q3_9STRA)

HSP 1 Score: 119 bits (298), Expect = 5.550e-24
Identity = 111/407 (27.27%), Postives = 161/407 (39.56%), Query Frame = 2
Query:  239 HNSDRTTRGYVLTALTKLAGRL-GEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGGEGKAAT---VDLMADIFAAKPAQPPAAAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFP 1447
            H S   TR Y+L A  KL  R    +Q   ++ ++ TYS SM +ELQ RSCE+  L   +   LR  +L  MP  D    R+R AR      G                                                        T   L   +     +L S G + Q+     PNLLD DD+FGG              +   +T   VDL++DIF+  P+Q      V     P P  A+    S                                       +   ++K G+ +     KP+ AEDPS T ++AIF N  +  +    F AA PKY++L+M+P SGSV+ A    A+ QVV+I N++  QK +LM++KL Y   G K+++MA++   P
Sbjct:  518 HTSTDVTRAYLLNACVKLTTRFENTEQLVRLQAIISTYSTSMLVELQQRSCEYTILGEQQWSSLRPSILTNMPPIDITKFRDRDARLSTVTSGI-----------------------------------------------------ATTTNLLEDDS-----VLESTGSTSQKADKTAPNLLDFDDIFGGGQPVAPPSEPQESEKNSVSTSNTVDLLSDIFSLGPSQ----TSVAPALPPAPVIASVPVQS---QATDLLGGLLDLEISSQESPSIVPVPVSSEATLPSGTVRGYDKNGIVLDLLPVKPN-AEDPSITFIQAIFSNRNSIQIDQFVFLAAFPKYIKLKMEPPSGSVLPANTISAITQVVKIQNTMHAQKPVLMRIKLEYIANGKKVEDMAAIDKLP 858          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: D7FHP4_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP4_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 5.360e-23
Identity = 143/428 (33.41%), Postives = 191/428 (44.63%), Query Frame = 2
Query:  239 HNSDRTTRGYVLTALTKLAGRLGE----DQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGGEGKAAT------------------VDLMADIFAAKPAQPPAAAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPPGY 1456
            H++  ++R   LTAL K + RLGE    D +  +E +L+ Y  S+ LELQ RSCE+  LL P+   ++K  LDRMPV DEE  R RRAR+     GA               + +F  +  +  R   XXXXXXXXXXXXXX         K   P+   +++ GG                 +LLDL+D+FGGXXXXXXXXXXX                           VDL+A             A   +  AP P P      S                                         VAF+K GL V F  SKP  A DPS + V   F N+   +++GL FQAAVPK   ++M   SG  +     G V Q + +TN++QG K+L+MKLK+ +  G   + E+A V  FP G+
Sbjct:  527 HSATASSRSSALTALAKASYRLGEGLGEDGKARVEEMLEGYRSSITLELQQRSCEYLNLLSPQWDVVKKEALDRMPVMDEEAFRERRARYT---MGA--------------GMGAFDDAPGAGDRSPKXXXXXXXXXXXXXXXX------XKNGLPIPSCSSNGGG-----------------DLLDLEDIFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVDLLAXXXXXXXXXXXXXAAPANTAAPGPGPVAVGGDS-------------------------DDFGGFEVAPPREEKMVAFDKSGLRVVFSPSKPD-ASDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPHSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAGF 888          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A024GJG3_9STRA (AP-1 complex subunit gamma n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GJG3_9STRA)

HSP 1 Score: 112 bits (280), Expect = 8.440e-22
Identity = 110/416 (26.44%), Postives = 160/416 (38.46%), Query Frame = 2
Query:  239 HNSDRTTRGYVLTALTKLAGRLGEDQEDA-IEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXP-----GGEGKAATVDLMADIFA-------AKPAQPPAAAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFP 1447
            H +   TR Y+L A  KL  R  + ++   ++ ++ TYS SM +ELQ RSCE+  L       LR  +L  MP  D    R+R  R      G                +P    S +                                                      Q+ A   PNLLDLDD+FGG                 G    + TVDL++DIF+         P  PPA      P    P P   ++ +                                       +   ++K G+ +     KP+  +DPS T ++AIF N  +  V    F AA PKY++L+M+P SGSV+ A    AV Q+V+I N++  QK +LM++KL Y V G K+++MA+V S P
Sbjct:  519 HTTTDVTRAYLLNACVKLTTRFNDTEQIVRLQAIISTYSTSMLVELQQRSCEYTILGEQHWAALRPSILANMPPIDIAKFRDRDTRLSTVGSGL---TATTTDLLEDDSIPRHTDSFS------------------------------------------------------QKVADTAPNLLDLDDIFGGGQSTTPASASEQQESQNGSVAPSNTVDLLSDIFSLGASQDSVAPTLPPA------PVVVAPVPVVKSDST----DLLGGLLDLTVSTSQKSASSTPIQLRVSEPSLPSGTVRGYDKNGIIMDLTPVKPN-TDDPSVTFIRAIFSNRNSFQVDQFVFLAAFPKYIKLKMEPPSGSVLPANTISAVTQMVKIQNTMHSQKPVLMRVKLEYVVNGEKVEDMAAVESLP 866          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGH0_ECTSI4.290e-12283.59AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxI... [more]
A0A7S2S951_9STRA1.360e-3336.73Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WL96_9STRA4.160e-3336.83AP-1 complex subunit gamma n=1 Tax=Rhizochromulina... [more]
W7TQP3_9STRA2.160e-3231.37AP-1 complex subunit gamma n=3 Tax=Monodopsidaceae... [more]
A0A5D6XNF9_9STRA1.670e-2733.58AP-1 complex subunit gamma n=1 Tax=Pythium brassic... [more]
K3WEF7_GLOUD3.610e-2631.71AP-1 complex subunit gamma n=1 Tax=Globisporangium... [more]
A0A1Y1I093_KLENI1.790e-2453.45AP-1 complex subunit gamma n=1 Tax=Klebsormidium n... [more]
F0W1Q3_9STRA5.550e-2427.27AP-1 complex subunit gamma n=1 Tax=Albugo laibachi... [more]
D7FHP4_ECTSI5.360e-2333.41AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxI... [more]
A0A024GJG3_9STRA8.440e-2226.44AP-1 complex subunit gamma n=1 Tax=Albugo candida ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig80contigEcto-sp13_S_contig80:36231..41186 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score322.0
Seed ortholog evalue3.6e-85
Seed eggNOG ortholog2880.D8LGH0
Model size2270
KEGG koko:K11279,ko:K12391
KEGG Pathwayko04142,map04142
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.intracellular protein transport
EggNOG OGsCOG4354@1,KOG1062@2759
Cds size1101
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig80.19314.1prot_Ecto-sp13_S_contig80.19314.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig80 37042..40828 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464072.5451035-UTR-Ecto-sp13_S_contig80:36230..370411681464072.5451035-UTR-Ecto-sp13_S_contig80:36230..37041Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig80 36231..37041 -
1681464072.6371098-UTR-Ecto-sp13_S_contig80:40828..411861681464072.6371098-UTR-Ecto-sp13_S_contig80:40828..41186Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig80 40829..41186 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464072.5574195-CDS-Ecto-sp13_S_contig80:37041..371431681464072.5574195-CDS-Ecto-sp13_S_contig80:37041..37143Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig80 37042..37143 -
1681464072.5686123-CDS-Ecto-sp13_S_contig80:37524..376631681464072.5686123-CDS-Ecto-sp13_S_contig80:37524..37663Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig80 37525..37663 -
1681464072.5797546-CDS-Ecto-sp13_S_contig80:38056..383641681464072.5797546-CDS-Ecto-sp13_S_contig80:38056..38364Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig80 38057..38364 -
1681464072.5935974-CDS-Ecto-sp13_S_contig80:38795..391971681464072.5935974-CDS-Ecto-sp13_S_contig80:38795..39197Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig80 38796..39197 -
1681464072.6086-CDS-Ecto-sp13_S_contig80:39951..400831681464072.6086-CDS-Ecto-sp13_S_contig80:39951..40083Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig80 39952..40083 -
1681464072.6266665-CDS-Ecto-sp13_S_contig80:40810..408281681464072.6266665-CDS-Ecto-sp13_S_contig80:40810..40828Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig80 40811..40828 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig80.19314.1

>prot_Ecto-sp13_S_contig80.19314.1 ID=prot_Ecto-sp13_S_contig80.19314.1|Name=mRNA_Ecto-sp13_S_contig80.19314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp
MNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNED
KGADDSDEDDDDDDEGRGLPSFRISKASKHRRGGSGSGSGAAAASARAAR
AALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGG
GPGDSAAAAAAPGGEGKAATVDLMADIFAAKPAQPPAAAGVVDPFAPTPA
PATAANGSGGGVAATLAAAAAAAAAAPGREAAPAITAAATSGQPPPPSFV
AFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPK
YLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGG
AKMQEMASVGSFPPGY*
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mRNA from alignment at Ecto-sp13_S_contig80:36231..41186-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig80.19314.1 ID=mRNA_Ecto-sp13_S_contig80.19314.1|Name=mRNA_Ecto-sp13_S_contig80.19314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4956bp|location=Sequence derived from alignment at Ecto-sp13_S_contig80:36231..41186- (Ectocarpus species13 EcNAP12_S_4_19m)
CGTGGAGTTCATGATCCTCCACGATAAGCACTGCTCCTGTTGCTGCCGCA ATGAAGCACGCTCTCGTTCGTTATCTCTTTCTCTCTCTCTCGCTGTTTCT CTGTCTCTTGTGTCTCTGTCGCTCTCTTTCTCCTTCAATCCCTCTCCCCC TCTCTCTGGCGCTCTCCCCGGCTCTTTATCCCCCCGCCCCCCGCCCTCTC TCTCCTTGGCGTGCTTCGCCGTGTGCGTTTTCTAGGATCATAACAGCGAC CGCACGACAAGAGGCTACGTCTTGACGGCCCTGACCAAGCTTGCCGGGCG GCTAGGGGAGGACCAGGAGGACGCGATCGAGGGCTTGCTGCAAACTTACA GCGGTTCCATGAACCTCGAGCTACAGGTGCAGCAGCAGCTAGACGTTGCC TGAGCACGGACCGTAGATACCGGTGGAAGCACACAGCCGGGTAGCTCGGT CGGTGCCATAACAGTTACCAGGACCCACAAGACCTACCCACCCACAGGGC GATTGTTGATCGCATATGTCACTACCGAAAACAAATATTTGATGTTGTTA ATGCGTTTGGTGCTGTACATAATTGCTGAAGTACTTGTGCAAAAAAATGG TCTAAAAGGAATACCTGTATCAGAAAACATGTCAGGGACACGTCCTTGTG CTCTCCTAGTGTAACTTTATCAATTAAGTGCTGTCAACAGATTGGATTTC CTTCCCGCACAAGTGCAAAGCGTGTTTCGCGGTAATGACAGGACGCATTA TCATTCCATCGTGGTGGGCAGGCAATGCATTGTGGACTTTCAACATCCTC GTTGAACGTGATTGGTCAAGCTCTTTCCTCAACCCCTGCCCCTCCTCCTC CTTGATCAACGACAGCGGTCGGAATCGGAAGACCCATCATCGTTCCTTCT TGCAGCGGTGCCAGGCACCCCGTGTGTTGCGGCGCTTTTTAGCTCCTCCT TGAAAATGATTGGCCTTCTCATTTCCTCAGCCCTCGGCGCTTCGATTGGC CATTGTTTCCCCTCAACCCATCCCCTTCCCCCGTCTCCTTCGTCCGACCT GCCTCCCCCCGGTCCTATCACACAACACGGGCGTTCGTGTGTGTTCGTGG CAGGCGAGATCCTGCGAGTTCGGCCAGCTATTGCGACCAGAGCTGGGTGA GCTCAGGAAGGGGATGCTTGATCGAATGCCGGTTGCTGATGAGGAGACCG TCCGCAATAGAAGAGCCCGCTTCCGGAACGAGGATGTAAGTTTTTTTTTT TTTTTGAGGCAGACAGAGACAGACAGACAGACAGAGAGAGATAGACAGAC AGACAGACAGACAGACAGACAGACAGACAGACTGAGAGGAGGGTTGGGGT GTGTGCTCATTAGGAAACGTATGACGTAGTTACTGAAACGTTGACCTGGC ATGCCGGGACGGAGCGATATGCCAGGGTTTCGCCCGCCCGGAGCAGGTGG GCAAGGGTGGGGGGGGTAGGCGGGCGGAGACAAGATTGCGAAGATAAGGG AGGAGATGGGGGCGAGCGTGGGGCATAGATGGAGGGGACCAAAATTTTCG AAGCGAAGATGAGGGAATGCCCTGACCAGGACCAGGGGAGGCGGTGAAAC ACAGGCTAGGAATACGTGTCCATCGGCGTTGTTTTTCCCGCCGTAAGGCT GACGTCTTCTCATTGGTCAACCTGTTCGCGCAGTCGATGCGAGTTGAAGA GCCAGAAACGCGCGCAAGCGAGGGATAAAAAGACATAGATGAGACAGGCA GACAAACCTAATGAGGGAGGTGGAACGGGTAAGCGCGTCGTTCGGCGTGG CCTCTCTTTCTTAGCCTGGCTCGGTTGTTTCGCACTTGCATCCGTGGGCC GCTCTCCTTTTTCTTGGGCTCTACCCCCCCCCCCCCCTCCCGCCCGGGAT GCGAGGCCCATGGTCTAGGGCTACGACATGCATTTACGTGACTACCCCCC CCCCCCCCGTCTTTGCTGCAAACCTCTAACATCGAGCAGAAGGGGGCCGA TGATTCAGACGAAGACGACGACGACGACGATGAAGGGCGTGGCTTGCCGT CTTTCAGGATCTCGAAGGCCAGCAAGCACAGGCGAGGGGGAAGCGGTAGC GGCAGCGGCGCGGCGGCGGCATCGGCGAGGGCGGCGAGGGCGGCGCTAGG GGCGGGGAAGAAGACGGTGCAACCTCTGGCGGGCCCGGCCGCCTCCGCCG GGGGAATTCTCAGCAGCGGGGGCCCCTCCAGGCAGGAACAGGCGGCCGCG GTGCCGAACTTGCTTGATTTGGACGACCTATTCGGCGGGGGGCCGGGGGA TTCTGCGGCGGCGGCGGCGGCTCCGGGGGGGGAAGGAAAAGCGGCGACGG TGGACCTGATGGCCGATATTTTTGCTGCGAAGCCTGCCCAGGTGAGCGAG CGGCGGAACGCGTGCGTTTGGCGTTGTGTTGTTGTTTCGTTGGAGGTGGT GGTGGTAGTGATGTTAGAGGAATTTTCGGTTTGTCTCTCTCAGGGGGAAC GTTGAACAGTTGTCAGTTGAGAGTTTTCGTGGTCATGAAATGGTGATATC CTTGCCGAGGCGGGTGACTGAAACTTTTAAATCTCGTCGGTTCGTGCCAT TACTGCTGTTACAGTTACCCTATATCACAATGTCAAGTCTTTCATCAGTT TTTGCTGGAAACGCCCGGAGTTAACGGCCCGACCTTGGGTTCCTTTCTCT CTTACTGCTCTTGTCTACAACTGTTGGCGGTGATCGATCCCCCTCCACGC CATACTTGATACGTGAGACTCAATTGTCGCCGCTGTGGGTGAATACGGCC CGCTTTTCCCGCGTGCCTGCAGCCACCGGCGGCCGCGGGTGTCGTCGACC CCTTCGCCCCAACACCGGCACCGGCCACCGCCGCTAACGGCAGCGGCGGT GGAGTTGCCGCGACACTAGCGGCGGCGGCAGCGGCGGCGGCGGCGGCGCC AGGGAGAGAAGCGGCGCCGGCGATAACGGCGGCAGCGACGTCGGGTCAAC CACCCCCGCCCTCGTTTGTCGCGTTCGAGAAAGGCGGCCTGACGGTGACC TTCGAGCTGTCCAAGCCGTCTCCGGCGGAGGACCCGTCGACCACTCTCGT CAAGGCCATCTTCCGGAATTCCGGGGCCAGGTGAGATTCTGCCCTCCCGC TCTACCACCCGCGGTCTGTTGTCGGCGGCGGATTGGTTTTGGGCGGTTGC GTGTGTCGGGTGTGTGGCGCACTTTCGTGCCAATATCGTAGGGCTCGAGA TACTCTTGGACGCTGTTTGCAGTTTTTGGAGGTATTTCTGCGTGGCATTC ACAGACGCGAAAACTTTCGGCACGAGTATAAGTTAGGAGGTGGTAGTTCT ACATGCGCCCGACCAACAAACTGAAAGTAAAAGTGACGTTTAGGAGGTTG AACTGCTTCGCTTTTCGCTGTCGTCGCTGCCCCCCCACCCCCCCCTTGCG ACATATCGTTGTCAACGCCTCTTTCCATACCCGCCGTACGCTCCTGCCCC CCAAACACGACCGTTGTTATTAGTGATGTAACGGGTCTGCACTTCCAGGC GGCGGTGCCGAAGTACCTTCGGCTGGAGATGCAGCCTGCGTCAGGGTCTG TGGTGAAGGCGGGGGGTGCAGGGGCTGTGGAGCAGGTCGTGCGCATCACG AACTCCTTGCAGGTATGTAGATAACGCAAGCGATGAGTTTGGGGAGGCCG GGGGGGGGAGTAGTGTGTGTTGGTGGGGACGTGTATGCAAGCGGTGATTT GGAAATAGTGGTGGTGTGTTTGTGAAGCCGGTGGTGTCAGAGATTGTTAT TTGTCCTCAGACCACCTGTGATGGCGATCTCAGCCCGTGCATGTTGGAAC AACAGGGACGGTCTAGACTTGGGGAGTACCAGAAGCGGCTGCGACGAGGT GATTGAGTGTAACGTGCTGTCGACTGTCTGTAACCCCCAAACAAAACTGC ACTGTCCCTACTCTGTGTGCCCCCGCGTCAAGCTCTCTCTCTCTCTCGCA CCTCCTACGTGTCTGGCCGTAACAAACCTGACGTCTTTCGCAGGGACAGA AGAACCTGTTGATGAAGCTCAAGCTGGTCTACGAGGTGGGAGGGGCGAAG ATGCAGGAGATGGCCAGCGTTGGCTCGTTCCCACCAGGATACTGAGGAAG GGTCCGCCCCGCCTTCTGGTTAAACTGGCGGATGGTCTTGGATTATGCCA GCAGTGGTCGGTGCTTACAGGGGCGTTGACTTGTTATTTGACCATGGTTT TGGAATGGATGGTGATCGTACAGTGAAGAGAGGTCGCGTTTAATATGAGG TCGTCACCCTCACCCACGCCATTGGGGCCGGTCACGAAGTTCAGGTCGCG CGCTCTCGATAGTCCGTTGATGCTTGGGTAGCGTACGCCACTGGCTCAGC CCATCGGTAAATGTATCCGTCTTGTGTGATTTTTGAGTAGTTGCTGGGTG GGGTGTTGGCGGTCGTAGATACATCCCATCGTGTTCCCGTTTCCGTGTTT TTTTTTCTCTTACAAACCACAACGATGTCGTTTTTACTGTTTTTGGGTAT GCTTCTTCCACAGTCGCTTGTTCCCCTGCCTCTTTTCACTTTGTGTCGAT GAAGGAACGCCACATGTTGCGACCACACGGCTGTACCGAACCCGTTCTCT TTTCTTGTTGTACCCGTACGTCTTGGCTGAAAAGCAGGGTGGGAGGCACA AAGTAAAATAGCATCGTGCGTGACCTTCGTGTTGCGTGATCTACCACGCT GGTTGCTTGCGTCCAAACACACAGCAAGAACAAAATGACGCCCGGAACAA AATGAAGTACAGCAGTGCGACGGCAATACTTGAAAAATACTGGTACGTCA TCGACCTACGGCGTCTCGGGAGGCTCCCTCTTCCTGCGACCTTGCCAGTG CAGTCGGATGGCAACGCTAAAAGAAGTGCTGATACAAGAACGGCCTACAA TGTCGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig80:36231..41186-

>mRNA_Ecto-sp13_S_contig80.19314.1 ID=mRNA_Ecto-sp13_S_contig80.19314.1|Name=mRNA_Ecto-sp13_S_contig80.19314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1101bp|location=Sequence derived from alignment at Ecto-sp13_S_contig80:36231..41186- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACCTCGAGCTACAGGCGAGATCCTGCGAGTTCGGCCAGCTATTGCG
ACCAGAGCTGGGTGAGCTCAGGAAGGGGATGCTTGATCGAATGCCGGTTG
CTGATGAGGAGACCGTCCGCAATAGAAGAGCCCGCTTCCGGAACGAGGAT
AAGGGGGCCGATGATTCAGACGAAGACGACGACGACGACGATGAAGGGCG
TGGCTTGCCGTCTTTCAGGATCTCGAAGGCCAGCAAGCACAGGCGAGGGG
GAAGCGGTAGCGGCAGCGGCGCGGCGGCGGCATCGGCGAGGGCGGCGAGG
GCGGCGCTAGGGGCGGGGAAGAAGACGGTGCAACCTCTGGCGGGCCCGGC
CGCCTCCGCCGGGGGAATTCTCAGCAGCGGGGGCCCCTCCAGGCAGGAAC
AGGCGGCCGCGGTGCCGAACTTGCTTGATTTGGACGACCTATTCGGCGGG
GGGCCGGGGGATTCTGCGGCGGCGGCGGCGGCTCCGGGGGGGGAAGGAAA
AGCGGCGACGGTGGACCTGATGGCCGATATTTTTGCTGCGAAGCCTGCCC
AGCCACCGGCGGCCGCGGGTGTCGTCGACCCCTTCGCCCCAACACCGGCA
CCGGCCACCGCCGCTAACGGCAGCGGCGGTGGAGTTGCCGCGACACTAGC
GGCGGCGGCAGCGGCGGCGGCGGCGGCGCCAGGGAGAGAAGCGGCGCCGG
CGATAACGGCGGCAGCGACGTCGGGTCAACCACCCCCGCCCTCGTTTGTC
GCGTTCGAGAAAGGCGGCCTGACGGTGACCTTCGAGCTGTCCAAGCCGTC
TCCGGCGGAGGACCCGTCGACCACTCTCGTCAAGGCCATCTTCCGGAATT
CCGGGGCCAGTGATGTAACGGGTCTGCACTTCCAGGCGGCGGTGCCGAAG
TACCTTCGGCTGGAGATGCAGCCTGCGTCAGGGTCTGTGGTGAAGGCGGG
GGGTGCAGGGGCTGTGGAGCAGGTCGTGCGCATCACGAACTCCTTGCAGG
GACAGAAGAACCTGTTGATGAAGCTCAAGCTGGTCTACGAGGTGGGAGGG
GCGAAGATGCAGGAGATGGCCAGCGTTGGCTCGTTCCCACCAGGATACTG
A
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