prot_Ecto-sp13_S_contig80.19314.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig80.19314.1
Unique Nameprot_Ecto-sp13_S_contig80.19314.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length367
Homology
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: D8LGH0_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGH0_ECTSI)

HSP 1 Score: 318 bits (816), Expect = 3.130e-98
Identity = 235/288 (81.60%), Postives = 238/288 (82.64%), Query Frame = 0
Query:    1 MNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARA-ALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXX-PGGEGKAATVDLMADIFAAKPAQPPAAAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGA 286
            MNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNED   DD             LPSFRISKASKHRRG  XXXXXXXXXXXXX    ALGAGKKTVQPLAGPAASAGGI+SSG PSRQEQAAAVPNLLDLDDLFGG            PGGEGKAATVDLMADIF+AKPAQPPAAAGVVDPFAPTPAPATAANGS  XXXXX XXXXXXXXXX          XXXXXXXXXX SFVAFEKGGLTVTFELSKPSP EDPSTTLVKAIFR+SGA
Sbjct:  554 MNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNED---DDDEGRG--------LPSFRISKASKHRRGGSXXXXXXXXXXXXXXXXXALGAGKKTVQPLAGPAASAGGIISSGAPSRQEQAAAVPNLLDLDDLFGGGPGDSAAAVAAAPGGEGKAATVDLMADIFSAKPAQPPAAAGVVDPFAPTPAPATAANGS--XXXXXTXXXXXXXXXXPGREAAPAVTXXXXXXXXXXPSFVAFEKGGLTVTFELSKPSPTEDPSTTLVKAIFRHSGA 828          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A7S2S951_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S951_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.110e-30
Identity = 145/389 (37.28%), Postives = 194/389 (49.87%), Query Frame = 0
Query:    1 MNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGG------------EGKAATVDLMADIFAAKPAQPPA------AAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----FVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPPGY 366
            M++ELQ R+CEF  LL      LR   L++MP  DEE ++ +RAR    D GA++                                             +A+ AG + +  +A PA+    + + GG        A PNLLDLDD+FGG            G                A   DL+ADIF+A PA P A         ++DPF    A +TAA  S XXX             XXXXXXXXXXXXXXXXXXXXXX        AFEK GL +T ELSKP+P+ DP  + +   F NS  SD + L FQAAVPK++ + +Q ASG+V+ + G+G+V QV+ + NS  G K L++K+ + YE  G+ ++EMA + SFP GY
Sbjct:   38 MDMELQQRACEFSTLLETTWDSLRPMALEQMPAMDEEKLKAKRAREATADVGAENGV-------------------------------------------SAITAGTQGMA-IAAPAS----LPAPGGD-------AGPNLLDLDDIFGGGGAGGPPAGPSSGALPPVTANGAAPPAAPATATDLLADIFSAPPAAPXAXXXXAPGGAMLDPFGGALA-STAATPSXXXXQPAAPVLDPFAAAXXXXXXXXXXXXXXXXXXXXXXXXQNPVITAFEKNGLKLTIELSKPNPS-DPQASDLLCTFTNSTPSDFSNLMFQAAVPKFVAMNIQQASGTVIPSMGSGSVTQVISVRNSQLGMKKLMLKMIIRYESMGSAVEEMAQMTSFPSGY 369          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A7S2WL96_9STRA (AP-1 complex subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL96_9STRA)

HSP 1 Score: 129 bits (325), Expect = 3.140e-29
Identity = 145/389 (37.28%), Postives = 194/389 (49.87%), Query Frame = 0
Query:    1 MNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGG------------EGKAATVDLMADIFAAKPAQPPA------AAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----FVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPPGY 366
            M++ELQ R+CEF  LL      LR   L++MP  DEE ++ +RAR    D GA++                                             +A+ AG + +  +A PA+    + + GG        A PNLLDLDD+FGG            G                A   DL+ADIF+A PA P A         ++DPF    A +TAA  S XXX             XXXXXXXXXXXXXXXXXXXXXX        AFEK GL +T ELSKP+P+ DP  + +   F NS  SD + L FQAAVPK++ + +Q ASG+V+ + G+G+V QV+ + NS  G K L++K+ + YE  G+ ++EMA + SFP GY
Sbjct:  574 MDMELQQRACEFSTLLETTWDSLRPMALEQMPAMDEEKLKAKRAREATADVGAENGV-------------------------------------------SAITAGTQGMA-IAAPAS----LPAPGGD-------AGPNLLDLDDIFGGGGAGGPPAGPSSGALPPVTANGAAPPAAPATATDLLADIFSAPPAAPXAXXXXAPGGAMLDPFGGALA-STAATPSXXXXQPAAPVLDPFAAAXXXXXXXXXXXXXXXXXXXXXXXXQNPVITAFEKNGLKLTIELSKPNPS-DPQASDLLCTFTNSTPSDFSNLMFQAAVPKFVAMNIQQASGTVIPSMGSGSVTQVISVRNSQLGMKKLMLKMIIRYESMGSAVEEMAQMTSFPSGY 905          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: W7TQP3_9STRA (AP-1 complex subunit gamma n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP3_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.310e-26
Identity = 116/376 (30.85%), Postives = 159/376 (42.29%), Query Frame = 0
Query:    1 MNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGGEGKAATV------DLMADIFAAK-PAQPPAAAGVV--DPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVG-GAKMQEMASVGSFPPGY 366
            + LELQ RSCEF Q+L P +  +R  ++ R+P  DE  +  RR RF     G +D                                                G GK+ V  + G      G    GG      +    +LLDL+++FGG            G     A++      DL++DIFA+  P   PA+A V    PF        A  G                     XX                 S  AF++ GL +T ELSKPSPA+DPS +L+   F N     +T L FQ AVP+Y++LE+ PASGS +    AG+V Q VR+ NSL GQK L +K+K+ Y  G G  + +M +V +FP GY
Sbjct:  565 LQLELQQRSCEFRQVLAPGVEGVRPEIVGRIPPLDEAMLTARRGRF----PGRED------------------------------------------------GGGKRGVS-MEGSLFGEEGTGKKGGKEGPAASGGATDLLDLEEIFGGAPGPGNGGNGMTGAVTGGASLKGGESADLLSDIFASNVPVAMPASAPVALSTPFDQV---VVAEEGH-----LPHAPPPSFSSSSSLXXPTPSAPLPPALPQQTTASITAFDQDGLRITMELSKPSPADDPSASLLLCRFDNRTDVTLTNLSFQCAVPRYVKLELSPASGSTLLPNTAGSVTQAVRVANSLLGQKPLQLKIKVQYTDGRGQPITKMGTVANFPAGY 879          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A1Y1I093_KLENI (AP-1 complex subunit gamma n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I093_KLENI)

HSP 1 Score: 120 bits (302), Expect = 3.070e-26
Identity = 62/116 (53.45%), Postives = 82/116 (70.69%), Query Frame = 0
Query:  248 SFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFP 363
            S VAFEK GL V F+ SKP  A +   T +KA + NSG S  T   FQAAVPK++ L ++PASGSVV AG AG+V Q + +TNSLQGQKNL+M+L++ Y+V G+++ E   V +FP
Sbjct:  734 SIVAFEKDGLRVHFDFSKP--AANSQQTTIKATYTNSGPSPFTDFVFQAAVPKFMTLSLEPASGSVVPAGQAGSVTQTINVTNSLQGQKNLVMRLRISYKVNGSEVLEQGQVSNFP 847          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A5D6XNF9_9STRA (AP-1 complex subunit gamma n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNF9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.520e-24
Identity = 98/236 (41.53%), Postives = 129/236 (54.66%), Query Frame = 0
Query:  133 EQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGGEGKA-ATVDLMADIFAA--KPAQPPAAAGVVDPFAPTPA--PATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFP 363
            + AAA PNLLDLD     XXXXXXXXXXX      A A VDL+ADIF+    PA PPAA     PF  + A  P T+++ S                                       +  A+EK GL+V  E+SKP+  +DPS T + A  RN+ A  V    F AA PKY++L+M+PASG VV     GAV Q+V+I NS+ G+K +LM++KL + V G K++EMA+V +FP
Sbjct:  644 QSAAATPNLLDLDXXXXXXXXXXXXXXXXXXXXXPAPAAVDLLADIFSTGPSPAAPPAA-----PFGLSVAAVPTTSSSSSAASDLLGLLDFGAPAVAAKPAPPPSNP------------TIRAYEKNGLSVDLEISKPNK-DDPSVTFIAATVRNASALPVQNFLFLAAFPKYIKLKMEPASGDVVPPHSGGAVTQLVKIQNSMHGEKPVLMRIKLDFTVNGTKLEEMAAVSNFP 861          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: K3WEF7_GLOUD (AP-1 complex subunit gamma n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEF7_GLOUD)

HSP 1 Score: 112 bits (280), Expect = 2.240e-23
Identity = 56/114 (49.12%), Postives = 80/114 (70.18%), Query Frame = 0
Query:  251 AFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPP 364
            A++K GLTV  E+SKP+  +DPS T + A  RNS A  +    F AA PKY++L+M+PASG +V     G V Q+V+I NS+ G+K +LM++KL + V G+K++EMA+V SFPP
Sbjct:  744 AYDKNGLTVDLEISKPNK-DDPSVTFIAATVRNSTAIPLQNFLFLAAFPKYIKLKMEPASGDMVPPHNGGTVTQLVKIQNSMHGEKPVLMRIKLEFTVNGSKVEEMAAVNSFPP 856          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A0M4J7Q5_ISOGA (Adaptor protein complex 1 subunit gamma (Fragment) n=1 Tax=Isochrysis galbana TaxID=37099 RepID=A0A0M4J7Q5_ISOGA)

HSP 1 Score: 100 bits (250), Expect = 1.800e-22
Identity = 52/118 (44.07%), Postives = 77/118 (65.25%), Query Frame = 0
Query:  249 FVAFEKGGLTVTFELSK-PSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPPG 365
            F A+ K GL +TF  SK PS   +PS T +++ F +S  + + GL+FQ AVPK++RL+M PAS +VV    +G V QV ++ NS+ GQK +++K+K+ Y  GG  + EM  V +FP G
Sbjct:    4 FTAYNKNGLLITFACSKDPS---NPSVTTIESSFTSSLPTPIEGLNFQVAVPKFMRLQMTPASSTVVPPNNSGKVTQVFKVANSMHGQKPVVLKIKIDYSSGGMPVTEMGQVDNFPAG 118          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A8J5XH90_DIALT (AP-1 complex subunit gamma n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XH90_DIALT)

HSP 1 Score: 108 bits (270), Expect = 4.450e-22
Identity = 57/118 (48.31%), Postives = 78/118 (66.10%), Query Frame = 0
Query:  249 FVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPPGY 366
            +VA+EKG L V F  SK     +P+ T V   F NS  S +T   FQAAVPK+++++MQPASGSVV AG +GAV Q++++ NS  GQK + M++K+ Y + G K+ E   V SFP GY
Sbjct:  757 WVAYEKGPLKVRFAASKEGG--NPAVTNVAITFTNSAPSPLTDFVFQAAVPKFMKMQMQPASGSVVPAGNSGAVTQLLKLANSAHGQKPIAMRIKVEYALQGNKLSETGEVASFPDGY 872          
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A7S3X1K0_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X1K0_9SPIT)

HSP 1 Score: 101 bits (252), Expect = 8.390e-22
Identity = 53/118 (44.92%), Postives = 76/118 (64.41%), Query Frame = 0
Query:  249 FVAFEKGGLTVTFELSK-PSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPPG 365
            F A+ K GL++ F  SK PS   +PS T ++A F +S    + GL+FQ AVPKY++L+M PAS S V   G G V Q+ ++ NS+ GQK +++K+K+ Y  GG  + EM  V +FPPG
Sbjct:   86 FQAYSKNGLSIMFACSKDPS---NPSITTIEASFTSSMPQPLEGLNFQVAVPKYMKLQMTPASSSTVPPNGMGKVTQLFKVANSMHGQKPVVLKIKVDYTSGGMPVSEMGQVDNFPPG 200          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGH0_ECTSI3.130e-9881.60AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxI... [more]
A0A7S2S951_9STRA1.110e-3037.28Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WL96_9STRA3.140e-2937.28AP-1 complex subunit gamma n=1 Tax=Rhizochromulina... [more]
W7TQP3_9STRA2.310e-2630.85AP-1 complex subunit gamma n=3 Tax=Monodopsidaceae... [more]
A0A1Y1I093_KLENI3.070e-2653.45AP-1 complex subunit gamma n=1 Tax=Klebsormidium n... [more]
A0A5D6XNF9_9STRA1.520e-2441.53AP-1 complex subunit gamma n=1 Tax=Pythium brassic... [more]
K3WEF7_GLOUD2.240e-2349.12AP-1 complex subunit gamma n=1 Tax=Globisporangium... [more]
A0A0M4J7Q5_ISOGA1.800e-2244.07Adaptor protein complex 1 subunit gamma (Fragment)... [more]
A0A8J5XH90_DIALT4.450e-2248.31AP-1 complex subunit gamma n=1 Tax=Diacronema luth... [more]
A0A7S3X1K0_9SPIT8.390e-2244.92Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008152Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainSMARTSM00809alpha_adaptinc2coord: 241..363
e-value: 6.1E-32
score: 122.1
IPR008152Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainPFAMPF02883Alpha_adaptinC2coord: 248..363
e-value: 5.1E-22
score: 78.3
NoneNo IPR availableGENE3D2.60.40.1230coord: 246..366
e-value: 1.3E-30
score: 107.8
NoneNo IPR availablePANTHERPTHR22780ADAPTIN, ALPHA/GAMMA/EPSILONcoord: 2..358
NoneNo IPR availablePANTHERPTHR22780:SF5ADAPTOR PROTEIN COMPLEX 1, GAMMA SUBUNIT, ISOFORM Dcoord: 2..358
IPR008153Gamma-adaptin ear (GAE) domainPROSITEPS50180GAEcoord: 244..363
score: 36.015
IPR013041Clathrin adaptor, appendage, Ig-like subdomain superfamilySUPERFAMILY49348Clathrin adaptor appendage domaincoord: 244..365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig80contigEcto-sp13_S_contig80:37042..40828 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig80.19314.1mRNA_Ecto-sp13_S_contig80.19314.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig80 36231..41186 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig80.19314.1 ID=prot_Ecto-sp13_S_contig80.19314.1|Name=mRNA_Ecto-sp13_S_contig80.19314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp
MNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNED
KGADDSDEDDDDDDEGRGLPSFRISKASKHRRGGSGSGSGAAAASARAAR
AALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGG
GPGDSAAAAAAPGGEGKAATVDLMADIFAAKPAQPPAAAGVVDPFAPTPA
PATAANGSGGGVAATLAAAAAAAAAAPGREAAPAITAAATSGQPPPPSFV
AFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPK
YLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGG
AKMQEMASVGSFPPGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008152Clathrin_a/b/g-adaptin_app_Ig
IPR008153GAE_dom
IPR013041Clathrin_app_Ig-like_sf