mRNA_Ecto-sp13_S_contig80.19314.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: D8LGH0_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGH0_ECTSI) HSP 1 Score: 395 bits (1014), Expect = 4.290e-122 Identity = 275/329 (83.59%), Postives = 278/329 (84.50%), Query Frame = 2
Query: 236 DHNSDRTTRGYVLTALTKLAGRLGEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARA-ALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXX-PGGEGKAATVDLMADIFAAKPAQPPAAAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGA 1216
DHNSDRTTRGYVLTALTKLA RLGEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNED DD LPSFRISKASKHRRG XXXXXXXXXXXXX ALGAGKKTVQPLAGPAASAGGI+SSG PSRQEQAAAVPNLLDLDDLFGG PGGEGKAATVDLMADIF+AKPAQPPAAAGVVDPFAPTPAPATAANGS XXXXX XXXXXXXXXX XXXXXXXXXX SFVAFEKGGLTVTFELSKPSP EDPSTTLVKAIFR+SGA
Sbjct: 513 DHNSDRTTRGYVLTALTKLAERLGEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNED---DDDEGRG--------LPSFRISKASKHRRGGSXXXXXXXXXXXXXXXXXALGAGKKTVQPLAGPAASAGGIISSGAPSRQEQAAAVPNLLDLDDLFGGGPGDSAAAVAAAPGGEGKAATVDLMADIFSAKPAQPPAAAGVVDPFAPTPAPATAANGS--XXXXXTXXXXXXXXXXPGREAAPAVTXXXXXXXXXXPSFVAFEKGGLTVTFELSKPSPTEDPSTTLVKAIFRHSGA 828
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A7S2S951_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S951_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.360e-33 Identity = 155/422 (36.73%), Postives = 210/422 (49.76%), Query Frame = 2
Query: 260 RGYVLTALTKLAGRLGEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGG------------EGKAATVDLMADIFAAKPAQPPA------AAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----FVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPPGY 1456
R +LTA KL+ RL + I +++ SM++ELQ R+CEF LL LR L++MP DEE ++ +RAR D GA++ +A+ AG + + +A PA+ + + GG A PNLLDLDD+FGG G A DL+ADIF+A PA P A ++DPF A +TAA S XXX XXXXXXXXXXXXXXXXXXXXXX AFEK GL +T ELSKP+P+ DP + + F NS SD + L FQAAVPK++ + +Q ASG+V+ + G+G+V QV+ + NS G K L++K+ + YE G+ ++EMA + SFP GY
Sbjct: 5 RSLLLTAFVKLSQRLQGSELPRILAFIESQRASMDMELQQRACEFSTLLETTWDSLRPMALEQMPAMDEEKLKAKRAREATADVGAENGV-------------------------------------------SAITAGTQGMA-IAAPAS----LPAPGGD-------AGPNLLDLDDIFGGGGAGGPPAGPSSGALPPVTANGAAPPAAPATATDLLADIFSAPPAAPXAXXXXAPGGAMLDPFGGALA-STAATPSXXXXQPAAPVLDPFAAAXXXXXXXXXXXXXXXXXXXXXXXXQNPVITAFEKNGLKLTIELSKPNPS-DPQASDLLCTFTNSTPSDFSNLMFQAAVPKFVAMNIQQASGTVIPSMGSGSVTQVISVRNSQLGMKKLMLKMIIRYESMGSAVEEMAQMTSFPSGY 369
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A7S2WL96_9STRA (AP-1 complex subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL96_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.160e-33 Identity = 158/429 (36.83%), Postives = 214/429 (49.88%), Query Frame = 2
Query: 239 HNSDRTTRGYVLTALTKLAGRLGEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGG------------EGKAATVDLMADIFAAKPAQPPA------AAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----FVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPPGY 1456
H + TTR +LTA KL+ RL + I +++ SM++ELQ R+CEF LL LR L++MP DEE ++ +RAR D GA++ +A+ AG + + +A PA+ + + GG A PNLLDLDD+FGG G A DL+ADIF+A PA P A ++DPF A +TAA S XXX XXXXXXXXXXXXXXXXXXXXXX AFEK GL +T ELSKP+P+ DP + + F NS SD + L FQAAVPK++ + +Q ASG+V+ + G+G+V QV+ + NS G K L++K+ + YE G+ ++EMA + SFP GY
Sbjct: 534 HIATPTTRSLLLTAFVKLSQRLQGSELPRILAFIESQRASMDMELQQRACEFSTLLETTWDSLRPMALEQMPAMDEEKLKAKRAREATADVGAENGV-------------------------------------------SAITAGTQGMA-IAAPAS----LPAPGGD-------AGPNLLDLDDIFGGGGAGGPPAGPSSGALPPVTANGAAPPAAPATATDLLADIFSAPPAAPXAXXXXAPGGAMLDPFGGALA-STAATPSXXXXQPAAPVLDPFAAAXXXXXXXXXXXXXXXXXXXXXXXXQNPVITAFEKNGLKLTIELSKPNPS-DPQASDLLCTFTNSTPSDFSNLMFQAAVPKFVAMNIQQASGTVIPSMGSGSVTQVISVRNSQLGMKKLMLKMIIRYESMGSAVEEMAQMTSFPSGY 905
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: W7TQP3_9STRA (AP-1 complex subunit gamma n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP3_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.160e-32 Identity = 133/424 (31.37%), Postives = 184/424 (43.40%), Query Frame = 2
Query: 236 DHNSDRTTRGYVLTALTKLAGR-------LGEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGGEGKAATV------DLMADIFAAK-PAQPPAAAGVV--DPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVG-GAKMQEMASVGSFPPGY 1456
+H + + TRGYVL AL KL+ R + + + + GLL Y S+ LELQ RSCEF Q+L P + +R ++ R+P DE + RR RF G +D G GK+ V + G G GG + +LLDL+++FGG G A++ DL++DIFA+ P PA+A V PF A G XX S AF++ GL +T ELSKPSPA+DPS +L+ F N +T L FQ AVP+Y++LE+ PASGS + AG+V Q VR+ NSL GQK L +K+K+ Y G G + +M +V +FP GY
Sbjct: 517 NHGATQVTRGYVLVALLKLSDRFAAASPSVSDAEMRRLAGLLSRYDTSLQLELQQRSCEFRQVLAPGVEGVRPEIVGRIPPLDEAMLTARRGRF----PGRED------------------------------------------------GGGKRGVS-MEGSLFGEEGTGKKGGKEGPAASGGATDLLDLEEIFGGAPGPGNGGNGMTGAVTGGASLKGGESADLLSDIFASNVPVAMPASAPVALSTPFDQV---VVAEEGH-----LPHAPPPSFSSSSSLXXPTPSAPLPPALPQQTTASITAFDQDGLRITMELSKPSPADDPSASLLLCRFDNRTDVTLTNLSFQCAVPRYVKLELSPASGSTLLPNTAGSVTQAVRVANSLLGQKPLQLKIKVQYTDGRGQPITKMGTVANFPAGY 879
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A5D6XNF9_9STRA (AP-1 complex subunit gamma n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNF9_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.670e-27 Identity = 138/411 (33.58%), Postives = 191/411 (46.47%), Query Frame = 2
Query: 239 HNSDRTTRGYVLTALTKLAGRLGEDQE-DAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGP--AASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGGEGKA-ATVDLMADIFAA--KPAQPPAAAGVVDPFAPTPA--PATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFP 1447
H++ TT+ Y L A+ KL R E + L+ ++ S+ L+LQ R+ E+ L +P+ LR +L MP D +R+R+ R R+ F S A + T L G A S + SS P+ + AAA PNLLDLD XXXXXXXXXXX A A VDL+ADIF+ PA PPAA PF + A P T+++ S + A+EK GL+V E+SKP+ +DPS T + A RN+ A V F AA PKY++L+M+PASG VV GAV Q+V+I NS+ G+K +LM++KL + V G K++EMA+V +FP
Sbjct: 519 HHATDTTKAYALNAMVKLTTRFQHPAEVQQLAHLIASFKSSVVLDLQQRATEYTTLGKPQWAALRPDVLANMPAIDVTKLRSRQNRTRS--------------------ASGFGSSTAVNN----------------------------TSIELLGDDDAFSTRAVSSSALPT--QSAAATPNLLDLDXXXXXXXXXXXXXXXXXXXXXPAPAAVDLLADIFSTGPSPAAPPAA-----PFGLSVAAVPTTSSSSSAASDLLGLLDFGAPAVAAKPAPPPSNP------------TIRAYEKNGLSVDLEISKPNK-DDPSVTFIAATVRNASALPVQNFLFLAAFPKYIKLKMEPASGDVVPPHSGGAVTQLVKIQNSMHGEKPVLMRIKLDFTVNGTKLEEMAAVSNFP 861
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: K3WEF7_GLOUD (AP-1 complex subunit gamma n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEF7_GLOUD) HSP 1 Score: 126 bits (316), Expect = 3.610e-26 Identity = 130/410 (31.71%), Postives = 178/410 (43.41%), Query Frame = 2
Query: 239 HNSDRTTRGYVLTALTKLAGRLGEDQE-DAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGGEGKAATVDLMADIFAAKPAQPPAAAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----SFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPP 1450
H S TT+ Y L A+ KL R E ++ L+ +++ S+ LELQ R+ E+ L +P+ LR +L MP D +RNR+ R + G + P A K ++S P +QAA PNLLDLDD+FGG GG +A + PA PAA VD A XXXXXXXXXXXX A++K GLTV E+SKP+ +DPS T + A RNS A + F AA PKY++L+M+PASG +V G V Q+V+I NS+ G+K +LM++KL + V G+K++EMA+V SFPP
Sbjct: 519 HASTDTTKAYALNAMMKLTTRFQSQSELQKLQHLIGSFNSSVVLELQQRASEYTTLGQPQWASLRPDILANMPAIDVTKLRNRQTRVNSSSVGNNQSADLLLNDE-----PLTSAMDAVK--------------------------------------------ITSDAP---KQAAPQPNLLDLDDIFGG------------GGSSASAPSSAL-------PAAAPAAPAAVDLLAXXXXXXXXXXXXXXXXXXXXXXXXXVSASAGVTSSANDLLGLMDFGAPAPAPPQNPKLRAYDKNGLTVDLEISKPNK-DDPSVTFIAATVRNSTAIPLQNFLFLAAFPKYIKLKMEPASGDMVPPHNGGTVTQLVKIQNSMHGEKPVLMRIKLEFTVNGSKVEEMAAVNSFPP 856
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A1Y1I093_KLENI (AP-1 complex subunit gamma n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I093_KLENI) HSP 1 Score: 120 bits (302), Expect = 1.790e-24 Identity = 62/116 (53.45%), Postives = 82/116 (70.69%), Query Frame = 2
Query: 1100 SFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFP 1447
S VAFEK GL V F+ SKP A + T +KA + NSG S T FQAAVPK++ L ++PASGSVV AG AG+V Q + +TNSLQGQKNL+M+L++ Y+V G+++ E V +FP
Sbjct: 734 SIVAFEKDGLRVHFDFSKP--AANSQQTTIKATYTNSGPSPFTDFVFQAAVPKFMTLSLEPASGSVVPAGQAGSVTQTINVTNSLQGQKNLVMRLRISYKVNGSEVLEQGQVSNFP 847
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: F0W1Q3_9STRA (AP-1 complex subunit gamma n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W1Q3_9STRA) HSP 1 Score: 119 bits (298), Expect = 5.550e-24 Identity = 111/407 (27.27%), Postives = 161/407 (39.56%), Query Frame = 2
Query: 239 HNSDRTTRGYVLTALTKLAGRL-GEDQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGGEGKAAT---VDLMADIFAAKPAQPPAAAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFP 1447
H S TR Y+L A KL R +Q ++ ++ TYS SM +ELQ RSCE+ L + LR +L MP D R+R AR G T L + +L S G + Q+ PNLLD DD+FGG + +T VDL++DIF+ P+Q V P P A+ S + ++K G+ + KP+ AEDPS T ++AIF N + + F AA PKY++L+M+P SGSV+ A A+ QVV+I N++ QK +LM++KL Y G K+++MA++ P
Sbjct: 518 HTSTDVTRAYLLNACVKLTTRFENTEQLVRLQAIISTYSTSMLVELQQRSCEYTILGEQQWSSLRPSILTNMPPIDITKFRDRDARLSTVTSGI-----------------------------------------------------ATTTNLLEDDS-----VLESTGSTSQKADKTAPNLLDFDDIFGGGQPVAPPSEPQESEKNSVSTSNTVDLLSDIFSLGPSQ----TSVAPALPPAPVIASVPVQS---QATDLLGGLLDLEISSQESPSIVPVPVSSEATLPSGTVRGYDKNGIVLDLLPVKPN-AEDPSITFIQAIFSNRNSIQIDQFVFLAAFPKYIKLKMEPPSGSVLPANTISAITQVVKIQNTMHAQKPVLMRIKLEYIANGKKVEDMAAIDKLP 858
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: D7FHP4_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP4_ECTSI) HSP 1 Score: 116 bits (290), Expect = 5.360e-23 Identity = 143/428 (33.41%), Postives = 191/428 (44.63%), Query Frame = 2
Query: 239 HNSDRTTRGYVLTALTKLAGRLGE----DQEDAIEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXPGGEGKAAT------------------VDLMADIFAAKPAQPPAAAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFPPGY 1456
H++ ++R LTAL K + RLGE D + +E +L+ Y S+ LELQ RSCE+ LL P+ ++K LDRMPV DEE R RRAR+ GA + +F + + R XXXXXXXXXXXXXX K P+ +++ GG +LLDL+D+FGGXXXXXXXXXXX VDL+A A + AP P P S VAF+K GL V F SKP A DPS + V F N+ +++GL FQAAVPK ++M SG + G V Q + +TN++QG K+L+MKLK+ + G + E+A V FP G+
Sbjct: 527 HSATASSRSSALTALAKASYRLGEGLGEDGKARVEEMLEGYRSSITLELQQRSCEYLNLLSPQWDVVKKEALDRMPVMDEEAFRERRARYT---MGA--------------GMGAFDDAPGAGDRSPKXXXXXXXXXXXXXXXX------XKNGLPIPSCSSNGGG-----------------DLLDLEDIFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVDLLAXXXXXXXXXXXXXAAPANTAAPGPGPVAVGGDS-------------------------DDFGGFEVAPPREEKMVAFDKSGLRVVFSPSKPD-ASDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPHSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAGF 888
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Match: A0A024GJG3_9STRA (AP-1 complex subunit gamma n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GJG3_9STRA) HSP 1 Score: 112 bits (280), Expect = 8.440e-22 Identity = 110/416 (26.44%), Postives = 160/416 (38.46%), Query Frame = 2
Query: 239 HNSDRTTRGYVLTALTKLAGRLGEDQEDA-IEGLLQTYSGSMNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDKGADDXXXXXXXXXXXXXLPSFRISKASKHRRGXXXXXXXXXXXXXXXARAALGAGKKTVQPLAGPAASAGGILSSGGPSRQEQAAAVPNLLDLDDLFGGXXXXXXXXXXXP-----GGEGKAATVDLMADIFA-------AKPAQPPAAAGVVDPFAPTPAPATAANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFVAFEKGGLTVTFELSKPSPAEDPSTTLVKAIFRNSGASDVTGLHFQAAVPKYLRLEMQPASGSVVKAGGAGAVEQVVRITNSLQGQKNLLMKLKLVYEVGGAKMQEMASVGSFP 1447
H + TR Y+L A KL R + ++ ++ ++ TYS SM +ELQ RSCE+ L LR +L MP D R+R R G +P S + Q+ A PNLLDLDD+FGG G + TVDL++DIF+ P PPA P P P ++ + + ++K G+ + KP+ +DPS T ++AIF N + V F AA PKY++L+M+P SGSV+ A AV Q+V+I N++ QK +LM++KL Y V G K+++MA+V S P
Sbjct: 519 HTTTDVTRAYLLNACVKLTTRFNDTEQIVRLQAIISTYSTSMLVELQQRSCEYTILGEQHWAALRPSILANMPPIDIAKFRDRDTRLSTVGSGL---TATTTDLLEDDSIPRHTDSFS------------------------------------------------------QKVADTAPNLLDLDDIFGGGQSTTPASASEQQESQNGSVAPSNTVDLLSDIFSLGASQDSVAPTLPPA------PVVVAPVPVVKSDST----DLLGGLLDLTVSTSQKSASSTPIQLRVSEPSLPSGTVRGYDKNGIIMDLTPVKPN-TDDPSVTFIRAIFSNRNSFQVDQFVFLAAFPKYIKLKMEPPSGSVLPANTISAVTQMVKIQNTMHSQKPVLMRVKLEYVVNGEKVEDMAAVESLP 866 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80.19314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig80.19314.1 >prot_Ecto-sp13_S_contig80.19314.1 ID=prot_Ecto-sp13_S_contig80.19314.1|Name=mRNA_Ecto-sp13_S_contig80.19314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp MNLELQARSCEFGQLLRPELGELRKGMLDRMPVADEETVRNRRARFRNEDback to top mRNA from alignment at Ecto-sp13_S_contig80:36231..41186- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig80.19314.1 ID=mRNA_Ecto-sp13_S_contig80.19314.1|Name=mRNA_Ecto-sp13_S_contig80.19314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4956bp|location=Sequence derived from alignment at Ecto-sp13_S_contig80:36231..41186- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig80:36231..41186- >mRNA_Ecto-sp13_S_contig80.19314.1 ID=mRNA_Ecto-sp13_S_contig80.19314.1|Name=mRNA_Ecto-sp13_S_contig80.19314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1101bp|location=Sequence derived from alignment at Ecto-sp13_S_contig80:36231..41186- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |