prot_Ecto-sp13_S_contig8.19304.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8.19304.1
Unique Nameprot_Ecto-sp13_S_contig8.19304.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length200
Homology
BLAST of mRNA_Ecto-sp13_S_contig8.19304.1 vs. uniprot
Match: A0A6H5KYJ8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ8_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 5.220e-89
Identity = 157/174 (90.23%), Postives = 160/174 (91.95%), Query Frame = 0
Query:    1 MAVQQQQRRRHQPGCGQSPRQSDRSATAGAAAVVMAALALCGGLVEVSEAFLSPATGRLPLAAQTTSRATVAPVAASGSSSAAAGRRAGGICMSAGKTIEMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALIVE 174
            MAVQQQQR RH+PGCGQSPRQS+RS  A      +A LALCGGLVEVSEAFLSP TGRLP AAQTTSRATVAPVAA GSSS AAGRRAGGICMSAGKTIEMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALIVE
Sbjct:    1 MAVQQQQRGRHRPGCGQSPRQSNRSGAAXXXXXXVA-LALCGGLVEVSEAFLSPVTGRLPFAAQTTSRATVAPVAARGSSSVAAGRRAGGICMSAGKTIEMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALIVE 173          
BLAST of mRNA_Ecto-sp13_S_contig8.19304.1 vs. uniprot
Match: D7FXE2_ECTSI (Dihydrolipoamide acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE2_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 4.550e-42
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query:   93 MSAGKTIEMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALIVE 174
            MSAGKTIEMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALIVE
Sbjct:    1 MSAGKTIEMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALIVE 82          
BLAST of mRNA_Ecto-sp13_S_contig8.19304.1 vs. uniprot
Match: A0A7S1FY38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY38_9STRA)

HSP 1 Score: 115 bits (287), Expect = 4.060e-29
Identity = 58/85 (68.24%), Postives = 71/85 (83.53%), Query Frame = 0
Query:  100 EMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALIVERYVRLSREAA 184
            E++MPALSSTM EG IV WLK+VG+K++ GDP+MVVESDKADMDVE+FE+GYLAA+L EEGD A VGAAV +IVE    ++  AA
Sbjct:   65 ELFMPALSSTMTEGKIVTWLKDVGEKVQAGDPIMVVESDKADMDVEAFEDGYLAAILVEEGDMANVGAAVGVIVENEGDVAAVAA 149          
BLAST of mRNA_Ecto-sp13_S_contig8.19304.1 vs. uniprot
Match: A0A7S3ZKI1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKI1_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.570e-27
Identity = 61/106 (57.55%), Postives = 75/106 (70.75%), Query Frame = 0
Query:   79 SSSAAAGRRAGGICMSAGKTIEMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALIVERYVRLSREAA 184
            S SAAA   A      A +++ + MPALSSTM  GTIV WLK VGDK+E GDPVMVVESDKADM+VESF+EGY+A++L +EG  A VGA VAL+      ++  AA
Sbjct:    1 SRSAAAPAAAAAPAGDAPESVSVTMPALSSTMTSGTIVSWLKNVGDKVEAGDPVMVVESDKADMEVESFDEGYVASILVDEGSEADVGAVVALLAPDEASIAEVAA 106          
BLAST of mRNA_Ecto-sp13_S_contig8.19304.1 vs. uniprot
Match: A0A7S0N9Z1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N9Z1_9CRYP)

HSP 1 Score: 105 bits (263), Expect = 2.660e-25
Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = 0
Query:  100 EMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALIVERYVRLSREAAMNRG 188
            ++ MPALSSTM+EG IVQW K VGD++E GD VMVVESDKADMDVE+FE GYLA +L  EG +  VG+AVALIV+    L + AA+  G
Sbjct:   79 DVTMPALSSTMKEGKIVQWTKSVGDRVEAGDIVMVVESDKADMDVEAFESGYLAKILVPEGSAGAVGSAVALIVQDKADLDKVAAVAAG 167          
BLAST of mRNA_Ecto-sp13_S_contig8.19304.1 vs. uniprot
Match: A0A836C7H2_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7H2_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.720e-25
Identity = 58/77 (75.32%), Postives = 68/77 (88.31%), Query Frame = 0
Query:   98 TIEMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALIVE 174
            T E+ MPALSSTM EG IVQWLKEVGD+++VGD VMVVESDKADMDVESFE G+LAA+LT EG++A VGAAVA++ E
Sbjct:   10 TKEIIMPALSSTMTEGKIVQWLKEVGDEVQVGDAVMVVESDKADMDVESFEAGFLAAILTPEGEAAPVGAAVAVLAE 86          
BLAST of mRNA_Ecto-sp13_S_contig8.19304.1 vs. uniprot
Match: A0A7J7IHU4_9RHOD (Lipoyl-binding domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHU4_9RHOD)

HSP 1 Score: 107 bits (266), Expect = 6.130e-25
Identity = 58/82 (70.73%), Postives = 68/82 (82.93%), Query Frame = 0
Query:  100 EMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALI---VERYVR 178
            E+++PALSSTM EG IVQWLK+VGD+IE GD V+VVESDKADMDVE+FEEGYLA +L +EG+SA VGA V LI   VE Y R
Sbjct:  156 EVFLPALSSTMTEGKIVQWLKQVGDRIEKGDIVLVVESDKADMDVEAFEEGYLAQILVKEGESAPVGATVGLIAKTVEGYRR 237          
BLAST of mRNA_Ecto-sp13_S_contig8.19304.1 vs. uniprot
Match: B8C489_THAPS (Lipoyl-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C489_THAPS)

HSP 1 Score: 102 bits (255), Expect = 1.070e-24
Identity = 54/95 (56.84%), Postives = 72/95 (75.79%), Query Frame = 0
Query:   98 TIEMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALIVERYVRLSREAAMNRGHGGD 192
            +I++ MPALSSTM+EG +V WLK+ GD+IE G+ +MVVESDKADMDVE+FE+GYLA +LT EG++A+VGA VAL+         + A+    GGD
Sbjct:    4 SIKITMPALSSTMKEGRVVSWLKQEGDEIEAGEAIMVVESDKADMDVEAFEDGYLAKILTGEGETAEVGAVVALVATS----EEDIAVVAAGGGD 94          
BLAST of mRNA_Ecto-sp13_S_contig8.19304.1 vs. uniprot
Match: A0A7S3E7J0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E7J0_9RHOD)

HSP 1 Score: 109 bits (273), Expect = 1.800e-24
Identity = 56/78 (71.79%), Postives = 68/78 (87.18%), Query Frame = 0
Query:   97 KTIEMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALIVE 174
            KT +++MPALSSTM EG IVQWLK+ GD ++VG+ +MVVESDKADMDVESFE+GYLA +LTEEG+SA VGA VAL+ E
Sbjct:   58 KTKDVFMPALSSTMTEGRIVQWLKQPGDFVDVGEIIMVVESDKADMDVESFEKGYLAQILTEEGESAGVGATVALLAE 135          
BLAST of mRNA_Ecto-sp13_S_contig8.19304.1 vs. uniprot
Match: A0A7S2DNK3_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNK3_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.170e-24
Identity = 56/86 (65.12%), Postives = 69/86 (80.23%), Query Frame = 0
Query:   99 IEMYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEGYLAAVLTEEGDSAKVGAAVALIVERYVRLSREAA 184
            +E+ MPALSSTM EG IVQWLK +G+K+E+GD +MVVESDKADMDVESFEEGYLAA+LT EG SA VG  VA++ E    ++  A+
Sbjct:   81 LEVTMPALSSTMVEGKIVQWLKGIGEKVEIGDAIMVVESDKADMDVESFEEGYLAAILTPEGGSAAVGDCVAVLAETEAEIAAVAS 166          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8.19304.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYJ8_9PHAE5.220e-8990.23Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FXE2_ECTSI4.550e-42100.00Dihydrolipoamide acetyltransferase n=1 Tax=Ectocar... [more]
A0A7S1FY38_9STRA4.060e-2968.24Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S3ZKI1_9STRA3.570e-2757.55Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A7S0N9Z1_9CRYP2.660e-2562.92Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A836C7H2_9STRA3.720e-2575.32Dihydrolipoamide acetyltransferase component of py... [more]
A0A7J7IHU4_9RHOD6.130e-2570.73Lipoyl-binding domain-containing protein n=1 Tax=C... [more]
B8C489_THAPS1.070e-2456.84Lipoyl-binding domain-containing protein n=1 Tax=T... [more]
A0A7S3E7J0_9RHOD1.800e-2471.79Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2DNK3_9STRA2.170e-2465.12Dihydrolipoamide acetyltransferase component of py... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000089Biotin/lipoyl attachmentPFAMPF00364Biotin_lipoylcoord: 100..172
e-value: 3.0E-19
score: 68.6
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 98..173
score: 28.295
NoneNo IPR availableGENE3D2.40.50.100coord: 93..187
e-value: 2.5E-28
score: 99.9
NoneNo IPR availablePANTHERPTHR23151:SF75DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 5 OF PYRUVATE DEHYDROGENASE COMPLEX, CHLOROPLASTICcoord: 92..175
NoneNo IPR availablePANTHERPTHR23151DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATEDcoord: 92..175
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..45
NoneNo IPR availableTMHMMTMhelixcoord: 30..52
IPR0030162-oxo acid dehydrogenase, lipoyl-binding sitePROSITEPS00189LIPOYLcoord: 123..152
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 98..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8contigEcto-sp13_S_contig8:2002..3697 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8.19304.1mRNA_Ecto-sp13_S_contig8.19304.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8 1632..3770 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8.19304.1 ID=prot_Ecto-sp13_S_contig8.19304.1|Name=mRNA_Ecto-sp13_S_contig8.19304.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=200bp
MAVQQQQRRRHQPGCGQSPRQSDRSATAGAAAVVMAALALCGGLVEVSEA
FLSPATGRLPLAAQTTSRATVAPVAASGSSSAAAGRRAGGICMSAGKTIE
MYMPALSSTMEEGTIVQWLKEVGDKIEVGDPVMVVESDKADMDVESFEEG
YLAAVLTEEGDSAKVGAAVALIVERYVRLSREAAMNRGHGGDISVELVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000089Biotin_lipoyl
IPR0030162-oxoA_DH_lipoyl-BS
IPR011053Single_hybrid_motif