prot_Ecto-sp13_S_contig7958.19253.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7958.19253.1
Unique Nameprot_Ecto-sp13_S_contig7958.19253.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length164
Homology
BLAST of mRNA_Ecto-sp13_S_contig7958.19253.1 vs. uniprot
Match: D7FHW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW5_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 3.510e-48
Identity = 80/90 (88.89%), Postives = 82/90 (91.11%), Query Frame = 0
Query:   48 MDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVNVRD------LTTSACMGCGAVKRTF 131
            MDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVNVR       LTTS CMGCGAV+RT+
Sbjct:    1 MDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVNVRVVRPPTYLTTSVCMGCGAVERTY 90          
BLAST of mRNA_Ecto-sp13_S_contig7958.19253.1 vs. uniprot
Match: A0A6H5L5Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Z1_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 1.060e-39
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
Query:   48 MDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVN 112
            MDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVN
Sbjct:    1 MDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVN 65          
BLAST of mRNA_Ecto-sp13_S_contig7958.19253.1 vs. uniprot
Match: A0A835ZG13_9STRA (Tctex-1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG13_9STRA)

HSP 1 Score: 137 bits (344), Expect = 7.680e-39
Identity = 64/96 (66.67%), Postives = 78/96 (81.25%), Query Frame = 0
Query:   17 RPTYRHKASVNTMREIIKGVLESELQGCTYHMDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVN 112
            +P YR +ASVN MREII+ +LE +L G TY  D AT QTK+I DEIK+ LK M+L RYKYVVQV+IGEQRGEGVRMG RCFWD++TD  ASE+++N
Sbjct:    1 QPAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFIN 96          
BLAST of mRNA_Ecto-sp13_S_contig7958.19253.1 vs. uniprot
Match: A0A7S2BCB7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCB7_9STRA)

HSP 1 Score: 126 bits (316), Expect = 4.580e-34
Identity = 59/100 (59.00%), Postives = 74/100 (74.00%), Query Frame = 0
Query:   13 TYQSRPTYRHKASVNTMREIIKGVLESELQGCTYHMDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVN 112
            TYQ RP YR + SVN M+ +IK V++ EL+G TY  +    QT  I D+I+N L+++  PRYK+ VQVVIGEQRGEGVRMG R FWD++TD  ASETYVN
Sbjct:   38 TYQIRPEYRQRISVNEMKVVIKSVVKEELEGKTYQTESVQDQTTAIADKIRNRLRDLQKPRYKFFVQVVIGEQRGEGVRMGCRTFWDADTDAYASETYVN 137          
BLAST of mRNA_Ecto-sp13_S_contig7958.19253.1 vs. uniprot
Match: A0A507FCI1_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507FCI1_9FUNG)

HSP 1 Score: 125 bits (313), Expect = 7.220e-34
Identity = 57/108 (52.78%), Postives = 74/108 (68.52%), Query Frame = 0
Query:   14 YQSRPTYRHKASVNTMREIIKGVLESELQGCTYHMDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVNVRDLTTSAC 121
            Y  RP ++ K     + ++I  +L   L G TYH D  +  T+ I DEIKN LKE++LPRYKY+V VVIGE RGEGVRMG RCFWD++TDNVA +T++NV +L    C
Sbjct:   12 YSIRPNFKQKFRPAIVTKLIHQILADRLTGATYHPDTCSQWTREIADEIKNRLKELDLPRYKYLVNVVIGEMRGEGVRMGCRCFWDADTDNVAQDTFINVSELLVFIC 119          
BLAST of mRNA_Ecto-sp13_S_contig7958.19253.1 vs. uniprot
Match: A0A7S3MAW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAW9_9STRA)

HSP 1 Score: 124 bits (312), Expect = 8.310e-34
Identity = 59/100 (59.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query:   13 TYQSRPTYRHKASVNTMREIIKGVLESELQGCTYHMDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVN 112
            TY   P Y++K  V   REIIK VL+S+L+   Y+M+     TK++ D+IK+ LK++ LPRYK VVQV IGEQRG+GVRMGSRCFWDS+TD+ ASETY N
Sbjct:   13 TYVIHPEYKNKFRVGPTREIIKEVLQSKLEKAQYNMETTQALTKQVADDIKDRLKDLVLPRYKIVVQVAIGEQRGQGVRMGSRCFWDSDTDSYASETYSN 112          
BLAST of mRNA_Ecto-sp13_S_contig7958.19253.1 vs. uniprot
Match: A0A7S2S8M8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8M8_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.570e-33
Identity = 59/100 (59.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query:   13 TYQSRPTYRHKASVNTMREIIKGVLESELQGCTYHMDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVN 112
            TYQ RP Y+ + SV  M+ II  V++ EL+G TY +DQA VQTK I DEI+N LK ++LPRYK++VQVV+GE R EGVRMG R FWD+ETD  A+  Y+N
Sbjct:    9 TYQIRPAYKQRVSVAAMKTIIDTVMKEELEGKTYAVDQAQVQTKHISDEIRNRLKALDLPRYKFMVQVVLGEMRLEGVRMGCRTFWDAETDAHATSNYMN 108          
BLAST of mRNA_Ecto-sp13_S_contig7958.19253.1 vs. uniprot
Match: A0A812LYX8_9DINO (DYNLT2B protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812LYX8_9DINO)

HSP 1 Score: 122 bits (306), Expect = 6.730e-33
Identity = 57/104 (54.81%), Postives = 75/104 (72.12%), Query Frame = 0
Query:    9 GQQLTYQSRPTYRHKASVNTMREIIKGVLESELQGCTYHMDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVN 112
            G + TY   P Y++K      REII+ VL+S+L   TY M+   + TK++ D+IK+ LKE+NLPRYK VVQV IGEQ+G+GVRMG+RCFWD +TD+ ASE Y N
Sbjct:    7 GDENTYVIHPEYKNKFRPGPTREIIRDVLQSKLDKATYSMETTQLLTKQVADDIKDRLKELNLPRYKIVVQVSIGEQKGQGVRMGTRCFWDGDTDSYASEMYCN 110          
BLAST of mRNA_Ecto-sp13_S_contig7958.19253.1 vs. uniprot
Match: A0A813IMB4_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IMB4_POLGL)

HSP 1 Score: 122 bits (305), Expect = 2.040e-32
Identity = 56/100 (56.00%), Postives = 74/100 (74.00%), Query Frame = 0
Query:   13 TYQSRPTYRHKASVNTMREIIKGVLESELQGCTYHMDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVN 112
            TY   P Y++K      RE+IK V++++L+  TY  D  ++ TK++ DEIK+ LKE+ LPRYK VVQV IGEQ+G+GVRMGSRCFWD +TD+ ASETY N
Sbjct:   37 TYVIHPEYKNKFRPGPTREVIKDVMQAKLERATYSPDTTSLLTKQVADEIKDRLKELMLPRYKIVVQVAIGEQKGQGVRMGSRCFWDGDTDSYASETYSN 136          
BLAST of mRNA_Ecto-sp13_S_contig7958.19253.1 vs. uniprot
Match: A0A6U6Z4C7_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A6U6Z4C7_9DINO)

HSP 1 Score: 120 bits (301), Expect = 3.960e-32
Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:   13 TYQSRPTYRHKASVNTMREIIKGVLESELQGCTYHMDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVN 112
            +Y   P Y++K      +EIIK VL+S+L+   Y M++    TK++ D+IK+ LKE+N  RYK VVQV IGEQRG+GVRMGSRCFWDS+TDN ASETY N
Sbjct:   12 SYIIHPEYKNKFRPGPAKEIIKEVLQSKLEKAQYSMEETQALTKQVADDIKDRLKELNWHRYKIVVQVAIGEQRGQGVRMGSRCFWDSDTDNFASETYSN 111          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7958.19253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHW5_ECTSI3.510e-4888.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5Z1_9PHAE1.060e-39100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZG13_9STRA7.680e-3966.67Tctex-1 (Fragment) n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2BCB7_9STRA4.580e-3459.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A507FCI1_9FUNG7.220e-3452.78Uncharacterized protein n=1 Tax=Spizellomyces sp. ... [more]
A0A7S3MAW9_9STRA8.310e-3459.00Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2S8M8_9STRA1.570e-3359.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A812LYX8_9DINO6.730e-3354.81DYNLT2B protein n=2 Tax=unclassified Symbiodinium ... [more]
A0A813IMB4_POLGL2.040e-3256.00Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A6U6Z4C7_9DINO3.960e-3257.00Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038586Tctex-1-like superfamilyGENE3D3.30.1140.40coord: 26..125
e-value: 4.0E-23
score: 83.2
IPR005334Dynein light chain Tctex-1 likePFAMPF03645Tctex-1coord: 29..112
e-value: 3.6E-22
score: 78.6
IPR005334Dynein light chain Tctex-1 likePANTHERPTHR21255T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAINcoord: 10..114
NoneNo IPR availablePANTHERPTHR21255:SF7TCTEX1 DOMAIN-CONTAINING PROTEIN 2coord: 10..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7958contigEcto-sp13_S_contig7958:3641..4987 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7958.19253.1mRNA_Ecto-sp13_S_contig7958.19253.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7958 3630..4998 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7958.19253.1 ID=prot_Ecto-sp13_S_contig7958.19253.1|Name=mRNA_Ecto-sp13_S_contig7958.19253.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=164bp
MNGVGADAGQQLTYQSRPTYRHKASVNTMREIIKGVLESELQGCTYHMDQ
ATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDS
ETDNVASETYVNVRDLTTSACMGCGAVKRTFCCRCTLRFRLFVPVAASSN
SHPSALLLAPKTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038586Tctex-1-like_sf
IPR005334Tctex-1-like