prot_Ecto-sp13_S_contig794.19230.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig794.19230.1
Unique Nameprot_Ecto-sp13_S_contig794.19230.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length107
Homology
BLAST of mRNA_Ecto-sp13_S_contig794.19230.1 vs. uniprot
Match: D7FS22_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS22_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 1.540e-61
Identity = 104/106 (98.11%), Postives = 105/106 (99.06%), Query Frame = 0
Query:    1 MKTKQVYLHDSTYATPFSLMLWGARVRHERPLGHKKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLVRKIEAPFTPTGELSNMLVSCLGRLLDIEARNPYN 106
            MKTKQVYLHDSTYATPFSLMLWGARVRHERPLGHKKKEAVEVVIDRWLRFRMTE+TAVAFKAMRRELSNLLVRKIEAPF PTGELSNMLVSCLGRLLDIEARNPYN
Sbjct: 1298 MKTKQVYLHDSTYATPFSLMLWGARVRHERPLGHKKKEAVEVVIDRWLRFRMTENTAVAFKAMRRELSNLLVRKIEAPFMPTGELSNMLVSCLGRLLDIEARNPYN 1403          
BLAST of mRNA_Ecto-sp13_S_contig794.19230.1 vs. uniprot
Match: A0A835Z4K1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4K1_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.450e-18
Identity = 47/109 (43.12%), Postives = 69/109 (63.30%), Query Frame = 0
Query:    1 MKTKQVYLHDSTYATPFSLMLWGARVRHERPLGHK-----KKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLVRKIE---APFTPTGELSNMLVSCLGRLLDIEA 101
            +KT+QVYLH++T  T FSL+LWG+ +RH R          KK A+ V +D WLRF+ TES  V FK +R++++ LL+ +IE   A  T   + + +L   + RLLD+EA
Sbjct:  907 VKTRQVYLHETTCCTAFSLLLWGSHIRHLRHTEDTGGPTLKKRALIVAVDEWLRFKTTESIGVVFKHLRKDINELLLSRIESARAAHTDGAKFAGVLADVVVRLLDMEA 1015          
BLAST of mRNA_Ecto-sp13_S_contig794.19230.1 vs. uniprot
Match: W7T633_9STRA (Putative atp-dependent rna helicase dhx36 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T633_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 6.220e-9
Identity = 32/101 (31.68%), Postives = 54/101 (53.47%), Query Frame = 0
Query:    1 MKTKQVYLHDSTYATPFSLMLWGARVRHERPLGHKKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLVRKIEAPFTPTGELSNMLVSCLGRLLDIEA 101
            M+T + YLHD ++ +P S++L+G+ +R  R  G    + V + +D WL F+  E T+V     ++ L   L +KI  P +        +V  L R+L +EA
Sbjct: 1164 MRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQPDSNFISRFQPVVRTLRRVLWLEA 1264          
BLAST of mRNA_Ecto-sp13_S_contig794.19230.1 vs. uniprot
Match: A0A7S3XX33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX33_HETAK)

HSP 1 Score: 61.2 bits (147), Expect = 9.870e-9
Identity = 34/102 (33.33%), Postives = 59/102 (57.84%), Query Frame = 0
Query:    1 MKTKQVYLHDSTYATPFSLMLWGARVRHERPLGH--KKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLVRKIEAPFTPTGELSNMLVSCLGRLLDIE 100
            +++ +VYLHDST+ + FSL+L+G  V   +  G    ++ A+ + +D W+ F+M +  AV  K  R E+  LL+ KIE P     +  N + + + +LL+ E
Sbjct:  255 VQSSRVYLHDSTFISAFSLLLFGGDVTASQDKGTTGSRRNAL-LSVDEWVSFKMPKEAAVLCKVFRLEIDRLLLTKIEDPSANCWQRGNAITAVVRKLLESE 355          
BLAST of mRNA_Ecto-sp13_S_contig794.19230.1 vs. uniprot
Match: A0A5B8MJU4_9CHLO (RNA helicase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MJU4_9CHLO)

HSP 1 Score: 55.8 bits (133), Expect = 9.090e-7
Identity = 35/100 (35.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query:    1 MKTKQVYLHDSTYATPFSLMLWGA---RVRHERPLGHKKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLVRKIEAPFTPTGELSNMLVSCLGRLL 97
            +KTK+VYLHD+T  TP++LML+      + +ER +         V ID W++ R+   TAV FK MR+ ++  L+ K+    +   E S  L+  L R++
Sbjct: 1375 IKTKKVYLHDTTVVTPYTLMLFCGGDFNIVYERGV---------VEIDGWIKLRVPAQTAVLFKKMRQIINGHLISKLNTS-SGVSEYSEKLMDSLSRIV 1464          
BLAST of mRNA_Ecto-sp13_S_contig794.19230.1 vs. uniprot
Match: UPI000180C9D3 (ATP-dependent RNA helicase DHX36 n=1 Tax=Ciona intestinalis TaxID=7719 RepID=UPI000180C9D3)

HSP 1 Score: 54.3 bits (129), Expect = 3.100e-6
Identity = 31/99 (31.31%), Postives = 53/99 (53.54%), Query Frame = 0
Query:    1 MKTKQVYLHDSTYATPFSLMLWGARVRHERPLGHKKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLVRKIEAPFTPTGELSNMLVSCLGRLLDI 99
            MKT +VYL+D++  +P+ L+ +G  +   +      K    + +D W+ FR     A   K +R+EL N+L RKI  PF+    LS+   S +  ++D+
Sbjct:  886 MKTAEVYLYDTSEVSPYPLLFFGGDISTFQDEDGVNK----ISVDGWIDFRSESKVAETVKKLRKELDNILERKIREPFSTLLHLSSS-ASVIKSIIDL 979          
BLAST of mRNA_Ecto-sp13_S_contig794.19230.1 vs. uniprot
Match: A0A7S0JE13_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JE13_9EUKA)

HSP 1 Score: 52.4 bits (124), Expect = 1.350e-5
Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    3 TKQVYLHDSTYATPFSLMLWGARVRHERPLGHKKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLVRKIE 76
            T ++ +HD T  T   LML+G+    E  + H +  A+   ID WL  R++  TAV FKA+RR+L+ L+ RKIE
Sbjct:  283 TGKICVHDCTAVTALDLMLFGS----EPQIFHAQHRAL---IDGWLEVRVSPRTAVLFKALRRQLTELMRRKIE 349          
BLAST of mRNA_Ecto-sp13_S_contig794.19230.1 vs. uniprot
Match: A0A2P8ZJV6_BLAGE (ATP-dependent RNA helicase DHX36 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8ZJV6_BLAGE)

HSP 1 Score: 50.8 bits (120), Expect = 5.090e-5
Identity = 29/80 (36.25%), Postives = 43/80 (53.75%), Query Frame = 0
Query:    1 MKTKQVYLHDSTYATPFSLMLWGARVRHERPLGHKKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLVRKIEAPFT 80
            +K+  +YLHD+T   PF L+ +G  +      G K      + +D+ +RFR  E+TAV  K +R+ L  LL  KI  P T
Sbjct:  837 LKSSSIYLHDTTMVYPFPLLFFGKGINVCSEDGLKM-----IAVDKSIRFRCEETTAVLVKELRKRLDQLLEYKITHPGT 911          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig794.19230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FS22_ECTSI1.540e-6198.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z4K1_9STRA5.450e-1843.12P-loop containing nucleoside triphosphate hydrolas... [more]
W7T633_9STRA6.220e-931.68Putative atp-dependent rna helicase dhx36 n=2 Tax=... [more]
A0A7S3XX33_HETAK9.870e-933.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5B8MJU4_9CHLO9.090e-735.00RNA helicase n=2 Tax=Chloropicon primus TaxID=1764... [more]
UPI000180C9D33.100e-631.31ATP-dependent RNA helicase DHX36 n=1 Tax=Ciona int... [more]
A0A7S0JE13_9EUKA1.350e-541.89Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A2P8ZJV6_BLAGE5.090e-536.25ATP-dependent RNA helicase DHX36 n=1 Tax=Blattella... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig794contigEcto-sp13_S_contig794:19730..20522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig794.19230.1mRNA_Ecto-sp13_S_contig794.19230.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig794 18681..20549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig794.19230.1 ID=prot_Ecto-sp13_S_contig794.19230.1|Name=mRNA_Ecto-sp13_S_contig794.19230.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=107bp
MKTKQVYLHDSTYATPFSLMLWGARVRHERPLGHKKKEAVEVVIDRWLRF
RMTESTAVAFKAMRRELSNLLVRKIEAPFTPTGELSNMLVSCLGRLLDIE
ARNPYN*
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