prot_Ecto-sp13_S_contig7931.19220.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7931.19220.1
Unique Nameprot_Ecto-sp13_S_contig7931.19220.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length344
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7931.19220.1 vs. uniprot
Match: D7FP56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP56_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 1.220e-89
Identity = 158/172 (91.86%), Postives = 161/172 (93.60%), Query Frame = 0 
Query:  162 YRGDFKRGVRDGHGVCSFFTASCGGGCSVATGSTLGATSIPTIPDSYDGEWVGDRPLGRGVLSLRAVAAAPAAP---SNRFSSSIAGSGSGLAGRGGGSGGSIEGLWTEEGLAHGREKLPGKGGVYEGQYRLGKREGHGRLDLPDGSEXXXXXXXXXXNGIGTFRCGVTRHV 330
            YRGDFKRGVRDGHGVCSFFTA CGGGCSVATG T GATSIPTIP+SYDGEWVG RPLGRGVLSLR VAAAPA     SNR+SSS+AGSGSGLAGRGGGSGGSIEGLWTEEGLA GREKLPGKGGVYEGQYRLGKREGHGRLDLPDGSEXXXXXXXXXXNGIGTFRCGVTRHV
Sbjct:  312 YRGDFKRGVRDGHGVCSFFTAGCGGGCSVATGGTPGATSIPTIPNSYDGEWVGGRPLGRGVLSLRVVAAAPAXXXXXSNRYSSSVAGSGSGLAGRGGGSGGSIEGLWTEEGLARGREKLPGKGGVYEGQYRLGKREGHGRLDLPDGSEXXXXXXXXXXNGIGTFRCGVTRHV 483
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7931.19220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP56_ECTSI1.220e-8991.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003409MORN motifSMARTSM00698morncoord: 206..227
e-value: 0.32
score: 17.8
coord: 305..326
e-value: 0.24
score: 18.8
coord: 160..181
e-value: 0.27
score: 18.3
coord: 282..303
e-value: 0.22
score: 19.1
IPR003409MORN motifPFAMPF02493MORNcoord: 284..305
e-value: 3.7E-5
score: 23.4
coord: 162..179
e-value: 9.3E-4
score: 19.0
coord: 307..324
e-value: 0.001
score: 18.8
coord: 208..223
e-value: 0.13
score: 12.2
coord: 331..344
e-value: 1.8
score: 8.6
NoneNo IPR availableGENE3D2.20.110.10coord: 285..344
e-value: 4.1E-8
score: 35.2
NoneNo IPR availablePANTHERPTHR43215:SF8coord: 161..224
coord: 260..342
NoneNo IPR availablePANTHERPTHR43215FAMILY NOT NAMEDcoord: 161..224
NoneNo IPR availablePANTHERPTHR43215FAMILY NOT NAMEDcoord: 260..342
NoneNo IPR availableSUPERFAMILY82185Histone H3 K4-specific methyltransferase SET7/9 N-terminal domaincoord: 161..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7931contigEcto-sp13_S_contig7931:4399..6773 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7931.19220.1mRNA_Ecto-sp13_S_contig7931.19220.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7931 778..6773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7931.19220.1 ID=prot_Ecto-sp13_S_contig7931.19220.1|Name=mRNA_Ecto-sp13_S_contig7931.19220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=344bp
MGRGTRRPRGRGGRRPGYQWRRFTGRHHQDIRRWRRLHRAAGRERPKAGQ
RTVRLRGGGGCGRRRAGCCHGERRWWRRQRWVVLGRLGCRQAPWTGRAPV
CGSTQGGKRWGWQWWWGRRRRRRRRGRGGGRGGGRGAAADVDEDIAIVVA
AFGPGCPPLASYRGDFKRGVRDGHGVCSFFTASCGGGCSVATGSTLGATS
IPTIPDSYDGEWVGDRPLGRGVLSLRAVAAAPAAPSNRFSSSIAGSGSGL
AGRGGGSGGSIEGLWTEEGLAHGREKLPGKGGVYEGQYRLGKREGHGRLD
LPDGSEYEGAWRNGRQNGIGTFRCGVTRHVYTGKWVGGVRCGRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003409MORN