mRNA_Ecto-sp13_S_contig7920.19205.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7920.19205.1 vs. uniprot
Match: A0A6H5L4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R7_9PHAE) HSP 1 Score: 431 bits (1109), Expect = 2.300e-136 Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 3
Query: 3 WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQALAQDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAIVFVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMTWQTIVDTVVVGAMGPPGGGRNHITPRLLRHFNILCFLEFDDSTLTRIFKTIVDWHFNLNK 632
WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQALAQDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAI+FVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMTWQT+VDTVVVGAMGPPGGGRNHITPR LRHFNILCFLEFDDSTLTRIFKTIVDWHFNLNK
Sbjct: 2658 WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQALAQDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAIIFVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMTWQTVVDTVVVGAMGPPGGGRNHITPRFLRHFNILCFLEFDDSTLTRIFKTIVDWHFNLNK 2867
BLAST of mRNA_Ecto-sp13_S_contig7920.19205.1 vs. uniprot
Match: D7FT69_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT69_ECTSI) HSP 1 Score: 422 bits (1084), Expect = 5.200e-133 Identity = 208/224 (92.86%), Postives = 209/224 (93.30%), Query Frame = 3
Query: 3 WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQ--------------ALAQDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAIVFVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMTWQTIVDTVVVGAMGPPGGGRNHITPRLLRHFNILCFLEFDDSTLTRIFKTIVDWHFNLNK 632
WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQ AL QDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAI+FVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMTWQTIVDTVVVGAMGPPGGGRNHITPRLLRHFNILCFLEFDDSTLTRIFKTIVDWHFNLNK
Sbjct: 2504 WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQERVINRTVYPVLAQALPQDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAIIFVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMTWQTIVDTVVVGAMGPPGGGRNHITPRLLRHFNILCFLEFDDSTLTRIFKTIVDWHFNLNK 2727
BLAST of mRNA_Ecto-sp13_S_contig7920.19205.1 vs. uniprot
Match: A0A835YLN5_9STRA (Dynein heavy chain and region D6 of dynein motor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN5_9STRA) HSP 1 Score: 315 bits (807), Expect = 9.160e-96 Identity = 146/208 (70.19%), Postives = 173/208 (83.17%), Query Frame = 3
Query: 3 WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQALAQDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAIVFVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMTWQTIVDTVVVGAMGPPGGGRNHITPRLLRHFNILCFLEFDDSTLTRIFKTIVDWHFNL 626
W ++LP IP T +IVVP AQ+ LL LLL D+ +VCGPTGTGKS Y + + Q+L QD+FK LTLGFSAKTSA MTQDIIDGKLDKRRKGV+GPP+GQ AIVFVDDLNMPEVETYGAQPPLELLRQ++D+GGWYNLK+MTWQ+IVDT ++ +MGPPGGGRN ++PRLLRHFN+LCF E+DD+TLTRIF TI+DWHF +
Sbjct: 1454 WSDLLPPDDIPLTTTFSEIVVPTEGMAQHGMLLQLLLGSDRPALVCGPTGTGKSVYAMRVLRQSLPQDRFKALTLGFSAKTSAAMTQDIIDGKLDKRRKGVFGPPLGQRAIVFVDDLNMPEVETYGAQPPLELLRQLVDSGGWYNLKEMTWQSIVDTTLLASMGPPGGGRNPVSPRLLRHFNLLCFAEYDDATLTRIFGTIMDWHFRV 1661
BLAST of mRNA_Ecto-sp13_S_contig7920.19205.1 vs. uniprot
Match: A0A482SUL6_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUL6_9ARCH) HSP 1 Score: 308 bits (788), Expect = 3.290e-93 Identity = 140/208 (67.31%), Postives = 170/208 (81.73%), Query Frame = 3
Query: 3 WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQALAQDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAIVFVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMTWQTIVDTVVVGAMGPPGGGRNHITPRLLRHFNILCFLEFDDSTLTRIFKTIVDWHFNL 626
W ++LP I +IVVPN YTAQ+N ++ LL+ R K ++CGPTGTGKS YV+ +IT L QDKFK L+LGFSAKTSANMTQDIIDGKLDKRRKGVYGPP GQ I+F+DDLNMPEVETYGAQPP+EL+RQ+IDNGGWY+LK+ +W+ I+D+ ++ AMGP GGGRN +TPRLLRHFN+ CF EFDD+TL RIF TIV WHF++
Sbjct: 2178 WTDLLPAFTIAADTPFSNIVVPNNYTAQFNFMIHLLVPRKKHVLMCGPTGTGKSVYVYNSITTGLPQDKFKSLSLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPQGQHCIIFIDDLNMPEVETYGAQPPIELIRQLIDNGGWYDLKEKSWKHIIDSSLIAAMGPAGGGRNSVTPRLLRHFNLFCFSEFDDNTLRRIFVTIVQWHFSI 2385
BLAST of mRNA_Ecto-sp13_S_contig7920.19205.1 vs. uniprot
Match: A0A7S3HNN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNN0_9STRA) HSP 1 Score: 300 bits (767), Expect = 1.660e-91 Identity = 139/206 (67.48%), Postives = 165/206 (80.10%), Query Frame = 3
Query: 3 WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQALAQDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAIVFVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMTWQTIVDTVVVGAMGPPGGGRNHITPRLLRHFNILCFLEFDDSTLTRIFKTIVDWHF 620
W +MLP I IVVPN YTAQY+ ++ LL+ + K +VCGPTGTGKS YV+ TIT L QD++K L LGFSAKTSANMTQDIIDGKLDKRRKGV+GPP GQ +I+F+DDLNMPEVE YGAQPP+EL+RQ++DNGGWY+LK+ +W+TIVDT V+ AMGP GGGRN +TPRLLRHFN+ F EFDD+TL RIF IV WHF
Sbjct: 397 WADMLPAYSIAPDTPYSTIVVPNNYTAQYSFMIELLVTQKKHVLVCGPTGTGKSVYVYNTITTQLPQDQYKALCLGFSAKTSANMTQDIIDGKLDKRRKGVFGPPPGQHSIIFIDDLNMPEVEEYGAQPPIELVRQLMDNGGWYDLKEKSWKTIVDTSVIAAMGPAGGGRNGVTPRLLRHFNLFSFAEFDDNTLRRIFSIIVQWHF 602
BLAST of mRNA_Ecto-sp13_S_contig7920.19205.1 vs. uniprot
Match: A0A7S3HNL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNL1_9STRA) HSP 1 Score: 300 bits (767), Expect = 1.280e-90 Identity = 139/206 (67.48%), Postives = 165/206 (80.10%), Query Frame = 3
Query: 3 WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQALAQDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAIVFVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMTWQTIVDTVVVGAMGPPGGGRNHITPRLLRHFNILCFLEFDDSTLTRIFKTIVDWHF 620
W +MLP I IVVPN YTAQY+ ++ LL+ + K +VCGPTGTGKS YV+ TIT L QD++K L LGFSAKTSANMTQDIIDGKLDKRRKGV+GPP GQ +I+F+DDLNMPEVE YGAQPP+EL+RQ++DNGGWY+LK+ +W+TIVDT V+ AMGP GGGRN +TPRLLRHFN+ F EFDD+TL RIF IV WHF
Sbjct: 397 WADMLPAYSIAPDTPYSTIVVPNNYTAQYSFMIELLVTQKKHVLVCGPTGTGKSVYVYNTITTQLPQDQYKALCLGFSAKTSANMTQDIIDGKLDKRRKGVFGPPPGQHSIIFIDDLNMPEVEEYGAQPPIELVRQLMDNGGWYDLKEKSWKTIVDTSVIAAMGPAGGGRNGVTPRLLRHFNLFSFAEFDDNTLRRIFSIIVQWHF 602
BLAST of mRNA_Ecto-sp13_S_contig7920.19205.1 vs. uniprot
Match: A0A7S2QVE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVE7_9STRA) HSP 1 Score: 297 bits (760), Expect = 1.910e-89 Identity = 145/209 (69.38%), Postives = 163/209 (77.99%), Query Frame = 3
Query: 3 WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQALAQDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAIVFVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMT--WQTIVDTVVVGAMGPPGGGRNHITPRLLRHFNILCFLEFDDSTLTRIFKTIVDWHFN 623
W + L + IPD A DIVV N YTAQ++ LLL R K + CGPTGTGKSTYV TIT+ Q KF+P+ LGFSAKTSANMTQDII GKLDKRRKG YGPP GQ AIVFVDDLNMPEVETYGAQPP+ELLRQMIDNGG+Y+L D W TI D +V AMGPPGGGRN +TPRLLRHFN++CF EFDD+TL RIF TI +W+FN
Sbjct: 2086 WEDTLDKFVIPDNAVYADIVVSNKYTAQFSYFCDLLLTRGKTALFCGPTGTGKSTYVLNTITKEFDQSKFRPIALGFSAKTSANMTQDIIHGKLDKRRKGFYGPPKGQRAIVFVDDLNMPEVETYGAQPPIELLRQMIDNGGYYDLVDPARPWLTIQDVTLVSAMGPPGGGRNGVTPRLLRHFNLMCFDEFDDATLMRIFSTIGEWYFN 2294
BLAST of mRNA_Ecto-sp13_S_contig7920.19205.1 vs. uniprot
Match: A0A1W0A8D9_9STRA (Dynein heavy chain n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8D9_9STRA) HSP 1 Score: 291 bits (746), Expect = 1.460e-87 Identity = 133/209 (63.64%), Postives = 166/209 (79.43%), Query Frame = 3
Query: 3 WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQALAQDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAIVFVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMTWQTIVDTVVVGAMGPPGGGRNHITPRLLRHFNILCFLEFDDSTLTRIFKTIVDWHFNLN 629
W L E IP + IVVP YTAQ +L+ LL++ +K +VCGPTGTGKS Y+ + + ++ D++ + L FSAKTSANMTQ+IIDGKLDKRRKGVYGPP+G+ IVFVDDLNMP++ETYGAQPP+EL+RQ++D+GGWY+LK+M WQ I+DT+VV AMGPPGGGRN ITPR RHFN+LCF EFDD+TL+RIF TIV W+FN N
Sbjct: 2217 WEETLKEYIIPSNSPFSSIVVPTIYTAQLENLVKLLVSNKRKVLVCGPTGTGKSCYLDAILNEKMSPDQYSVIMLSFSAKTSANMTQNIIDGKLDKRRKGVYGPPVGKNGIVFVDDLNMPQIETYGAQPPIELVRQLVDSGGWYDLKEMVWQKIIDTIVVTAMGPPGGGRNTITPRFQRHFNVLCFSEFDDATLSRIFTTIVGWYFNSN 2425
BLAST of mRNA_Ecto-sp13_S_contig7920.19205.1 vs. uniprot
Match: A0A2D4BMI7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMI7_PYTIN) HSP 1 Score: 290 bits (741), Expect = 6.860e-87 Identity = 135/209 (64.59%), Postives = 166/209 (79.43%), Query Frame = 3
Query: 3 WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQALAQDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAIVFVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMTWQTIVDTVVVGAMGPPGGGRNHITPRLLRHFNILCFLEFDDSTLTRIFKTIVDWHFNLN 629
W +L + IP IVVP YTAQ +L+ LL+ +K +VCGPTGTGKS Y+ + + L QDK+ + L FSAKTSANMTQ+IIDGKLDKRRKGV+GPP+G+ AIVFVDDLNMP VETYGAQPP+EL+RQ+ID+GG+Y+LKDMTW+ I+DT+VV AMGPPGGGRN++TPRLLRHFN+LCF EFDD+TLTRIF TI+ + N
Sbjct: 2031 WEELLKDYVIPPGTPFNQIVVPTIYTAQLETLVALLIQNKRKVLVCGPTGTGKSCYLSAILNETLPQDKYSVVMLAFSAKTSANMTQNIIDGKLDKRRKGVFGPPVGKDAIVFVDDLNMPLVETYGAQPPIELVRQLIDSGGYYDLKDMTWRKIIDTIVVAAMGPPGGGRNNVTPRLLRHFNLLCFSEFDDATLTRIFSTILSSYLQSN 2239
BLAST of mRNA_Ecto-sp13_S_contig7920.19205.1 vs. uniprot
Match: K3WBA0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBA0_GLOUD) HSP 1 Score: 288 bits (738), Expect = 1.700e-86 Identity = 135/209 (64.59%), Postives = 165/209 (78.95%), Query Frame = 3
Query: 3 WVNMLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKSTYVFKTITQALAQDKFKPLTLGFSAKTSANMTQDIIDGKLDKRRKGVYGPPMGQTAIVFVDDLNMPEVETYGAQPPLELLRQMIDNGGWYNLKDMTWQTIVDTVVVGAMGPPGGGRNHITPRLLRHFNILCFLEFDDSTLTRIFKTIVDWHFNLN 629
W ++L E I IVVP +TAQ L+ LL+ +K +VCGPTGTGKS Y+ + L QDK+ + L FSAKTSANMTQ+IIDGKLDKRRKGVYGPPMG+ AIVFVDDLNMP VETYGAQPP+EL+RQ+ID+GG+Y+LK+M W+ +VDT+V+ AMGPPGGGRN++TPRLLRHFN+LCF EFDD+TLTRIF TI+ W+F N
Sbjct: 979 WEDILREYVIQPNTPFNQIVVPTIFTAQLEYLVQLLVTNKRKVLVCGPTGTGKSCYMGAILNDVLPQDKYSVIMLSFSAKTSANMTQNIIDGKLDKRRKGVYGPPMGKNAIVFVDDLNMPLVETYGAQPPVELVRQLIDSGGYYDLKEMVWRKVVDTIVLAAMGPPGGGRNNVTPRLLRHFNLLCFSEFDDATLTRIFTTILSWYFGTN 1187 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7920.19205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7920.19205.1 >prot_Ecto-sp13_S_contig7920.19205.1 ID=prot_Ecto-sp13_S_contig7920.19205.1|Name=mRNA_Ecto-sp13_S_contig7920.19205.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp MLPELQIPDAATMGDIVVPNAYTAQYNSLLTLLLNRDKKTIVCGPTGTGKback to top mRNA from alignment at Ecto-sp13_S_contig7920:3885..6033+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7920.19205.1 ID=mRNA_Ecto-sp13_S_contig7920.19205.1|Name=mRNA_Ecto-sp13_S_contig7920.19205.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2149bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7920:3885..6033+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7920:3885..6033+ >mRNA_Ecto-sp13_S_contig7920.19205.1 ID=mRNA_Ecto-sp13_S_contig7920.19205.1|Name=mRNA_Ecto-sp13_S_contig7920.19205.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=621bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7920:3885..6033+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |